RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 SCRN1Q12765 414 aa13.41□□□□□ -0.26
VRK1-204ENST00000555351 NPY5RQ15761 445 aa13.41□□□□□ -0.26
VRK1-204ENST00000555351 Q4G0T1 1027 aa13.41□□□□□ -0.26
VRK1-204ENST00000555351 FBXO47Q5MNV8 452 aa13.41□□□□□ -0.26
VRK1-204ENST00000555351 PDXDC2PQ6P474 469 aa13.41□□□□□ -0.26
VRK1-204ENST00000555351 TSHZ1Q6ZSZ6 1077 aa13.41□□□□□ -0.26
VRK1-204ENST00000555351 KRT25Q7Z3Z0 450 aa13.41□□□□□ -0.26
VRK1-204ENST00000555351 CCDC60Q8IWA6 550 aaPredicted RBP13.41□□□□□ -0.26
VRK1-204ENST00000555351 RDM1Q8NG50 284 aa13.41□□□□□ -0.26
VRK1-204ENST00000555351 RASGRP4Q8TDF6 673 aa13.41□□□□□ -0.26
VRK1-204ENST00000555351 DNAJB3Q8WWF6 145 aa13.41□□□□□ -0.26
VRK1-204ENST00000555351 BBXQ8WY36 941 aaPredicted RBP13.41□□□□□ -0.26
VRK1-204ENST00000555351 WASF1Q92558 559 aa13.41□□□□□ -0.26
VRK1-204ENST00000555351 SLC5A5Q92911 643 aa13.41□□□□□ -0.26
VRK1-204ENST00000555351 FAM167AQ96KS9 214 aa13.41□□□□□ -0.26
VRK1-204ENST00000555351 MBOAT7Q96N66 472 aa13.41□□□□□ -0.26
VRK1-204ENST00000555351 SAMD11Q96NU1 681 aa13.41□□□□□ -0.26
VRK1-204ENST00000555351 TPCN1Q9ULQ1 816 aa13.41□□□□□ -0.26
VRK1-204ENST00000555351 M0QZ92 97 aa13.4□□□□□ -0.26
VRK1-204ENST00000555351 DLL1O00548 723 aa13.4□□□□□ -0.26
VRK1-204ENST00000555351 GTPBP6O43824 516 aaPredicted RBP13.4□□□□□ -0.26
VRK1-204ENST00000555351 EDIL3O43854 480 aa13.4□□□□□ -0.26
VRK1-204ENST00000555351 IGFBP4P22692 258 aa13.4□□□□□ -0.26
VRK1-204ENST00000555351 JAK3P52333 1124 aa13.4□□□□□ -0.26
VRK1-204ENST00000555351 STK3Q13188 491 aa13.4□□□□□ -0.26
VRK1-204ENST00000555351 LPIN1Q14693 890 aa13.4□□□□□ -0.26
VRK1-204ENST00000555351 SWSAP1Q6NVH7 229 aa13.4□□□□□ -0.26
VRK1-204ENST00000555351 MTHFD1LQ6UB35 978 aa13.4□□□□□ -0.26
VRK1-204ENST00000555351 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.4□□□□□ -0.261e-8■□□□□ 9.2
VRK1-204ENST00000555351 TBCKQ8TEA7 893 aa13.4□□□□□ -0.26
VRK1-204ENST00000555351 TGS1Q96RS0 853 aaKnown RBP13.4□□□□□ -0.26
VRK1-204ENST00000555351 PHF20Q9BVI0 1012 aa13.4□□□□□ -0.26
VRK1-204ENST00000555351 FTHL17Q9BXU8 183 aa13.4□□□□□ -0.26
VRK1-204ENST00000555351 TSPYL2Q9H2G4 693 aaPredicted RBP13.4□□□□□ -0.26
VRK1-204ENST00000555351 CEP131Q9UPN4 1083 aa13.4□□□□□ -0.26
VRK1-204ENST00000555351 CDY2AQ9Y6F7 541 aa13.4□□□□□ -0.26
VRK1-204ENST00000555351 IGSF9BQ9UPX0 1349 aa13.39□□□□□ -0.27
VRK1-204ENST00000555351 TRANK1O15050 2925 aa13.39□□□□□ -0.27
VRK1-204ENST00000555351 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.39□□□□□ -0.27
VRK1-204ENST00000555351 LINC01553A4QN01 128 aa13.39□□□□□ -0.27
VRK1-204ENST00000555351 DDX39AO00148 427 aaKnown RBP13.39□□□□□ -0.27
VRK1-204ENST00000555351 MSH4O15457 936 aa13.39□□□□□ -0.27
VRK1-204ENST00000555351 PPFIA3O75145 1194 aa13.39□□□□□ -0.27
VRK1-204ENST00000555351 AK2P54819 239 aa13.39□□□□□ -0.27
VRK1-204ENST00000555351 IGBP1P78318 339 aa13.39□□□□□ -0.27
VRK1-204ENST00000555351 NONOQ15233 471 aaKnown RBP eCLIP13.39□□□□□ -0.27
VRK1-204ENST00000555351 ODR4Q5SWX8 454 aa13.39□□□□□ -0.27
VRK1-204ENST00000555351 MYOCDQ8IZQ8 938 aa13.39□□□□□ -0.27
VRK1-204ENST00000555351 ATXN2LQ8WWM7 1075 aaKnown RBP13.39□□□□□ -0.27
VRK1-204ENST00000555351 SYMPKQ92797 1274 aaKnown RBP13.39□□□□□ -0.27
VRK1-204ENST00000555351 NAP1L4Q99733 375 aaKnown RBP13.39□□□□□ -0.27
VRK1-204ENST00000555351 CELF4Q9BZC1 486 aaKnown RBP13.39□□□□□ -0.27
VRK1-204ENST00000555351 OSBPL7Q9BZF2 842 aa13.39□□□□□ -0.27
VRK1-204ENST00000555351 TRPV2Q9Y5S1 764 aa13.39□□□□□ -0.27
VRK1-204ENST00000555351 MTCH2Q9Y6C9 303 aa13.39□□□□□ -0.27
VRK1-204ENST00000555351 LCHNA4D1U4 455 aa13.38□□□□□ -0.27
VRK1-204ENST00000555351 ZBTB42B2RXF5 422 aa13.38□□□□□ -0.27
VRK1-204ENST00000555351 MAGEB2O15479 319 aa13.38□□□□□ -0.27
VRK1-204ENST00000555351 GAS7O60861 476 aa13.38□□□□□ -0.27
VRK1-204ENST00000555351 PSMD10O75832 226 aa13.38□□□□□ -0.27
VRK1-204ENST00000555351 ARHGEF15O94989 841 aa13.38□□□□□ -0.27
VRK1-204ENST00000555351 GHRP10912 638 aa13.38□□□□□ -0.27
VRK1-204ENST00000555351 GCFC2P16383 781 aaKnown RBP13.38□□□□□ -0.27
VRK1-204ENST00000555351 ATP4AP20648 1035 aa13.38□□□□□ -0.27
VRK1-204ENST00000555351 KLRC1P26715 233 aa13.38□□□□□ -0.27
VRK1-204ENST00000555351 LRCH2Q5VUJ6 765 aa13.38□□□□□ -0.27
VRK1-204ENST00000555351 PPP4R3AQ6IN85 833 aa13.38□□□□□ -0.27
VRK1-204ENST00000555351 B3GNT9Q6UX72 402 aa13.38□□□□□ -0.27
VRK1-204ENST00000555351 ARNTL2Q8WYA1 636 aa13.38□□□□□ -0.27
VRK1-204ENST00000555351 LARP6Q9BRS8 491 aaKnown RBP13.38□□□□□ -0.27
VRK1-204ENST00000555351 TEKT3Q9BXF9 490 aa13.38□□□□□ -0.27
VRK1-204ENST00000555351 DISC1Q9NRI5 854 aa13.38□□□□□ -0.27
VRK1-204ENST00000555351 CHD7Q9P2D1 2997 aa13.38□□□□□ -0.27
VRK1-204ENST00000555351 MYH9P35579 1960 aaKnown RBP13.38□□□□□ -0.27
VRK1-204ENST00000555351 LPXNO60711 386 aa13.37□□□□□ -0.27
VRK1-204ENST00000555351 TMCO2Q7Z6W1 182 aaPredicted RBP13.37□□□□□ -0.27
VRK1-204ENST00000555351 CKAP2LQ8IYA6 745 aa13.37□□□□□ -0.27
VRK1-204ENST00000555351 KIAA0319LQ8IZA0 1049 aa13.37□□□□□ -0.27
VRK1-204ENST00000555351 IL27Q8NEV9 243 aa13.37□□□□□ -0.27
VRK1-204ENST00000555351 ETNPPLQ8TBG4 499 aa13.37□□□□□ -0.27
VRK1-204ENST00000555351 TRAPPC12Q8WVT3 735 aa13.37□□□□□ -0.27
VRK1-204ENST00000555351 GTF3C6Q969F1 213 aa13.37□□□□□ -0.27
VRK1-204ENST00000555351 FAM20AQ96MK3 541 aa13.37□□□□□ -0.27
VRK1-204ENST00000555351 YME1L1Q96TA2 773 aa13.37□□□□□ -0.27
VRK1-204ENST00000555351 FAM49AQ9H0Q0 323 aaPredicted RBP13.37□□□□□ -0.27
VRK1-204ENST00000555351 NRBP2Q9NSY0 501 aa13.37□□□□□ -0.27
VRK1-204ENST00000555351 THEGQ9P2T0 379 aa13.37□□□□□ -0.27
VRK1-204ENST00000555351 ORC3Q9UBD5 711 aaPredicted RBP13.37□□□□□ -0.27
VRK1-204ENST00000555351 GABBR1Q9UBS5 961 aa13.37□□□□□ -0.27
VRK1-204ENST00000555351 SAMM50Q9Y512 469 aa13.37□□□□□ -0.27
VRK1-204ENST00000555351 COL4A4P53420 1690 aaPredicted RBP13.37□□□□□ -0.27
VRK1-204ENST00000555351 CCDC194A0A1B0GVG4 234 aa13.36□□□□□ -0.27
VRK1-204ENST00000555351 EPOPA6NHQ4 379 aa13.36□□□□□ -0.27
VRK1-204ENST00000555351 ENPP3O14638 875 aa13.36□□□□□ -0.27
VRK1-204ENST00000555351 TBX3O15119 743 aa13.36□□□□□ -0.27
VRK1-204ENST00000555351 CTDNEP1O95476 244 aa13.36□□□□□ -0.27
VRK1-204ENST00000555351 C22orf31O95567 290 aa13.36□□□□□ -0.27
VRK1-204ENST00000555351 OATP04181 439 aa13.36□□□□□ -0.27
VRK1-204ENST00000555351 NEK4P51957 841 aa13.36□□□□□ -0.27
VRK1-204ENST00000555351 GRB10Q13322 594 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms