RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 SPATS2Q86XZ4 545 aaKnown RBP9.67□□□□□ -0.86
SYNE2-217ENST00000555022 MYOCDQ8IZQ8 938 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 TGFBRAP1Q8WUH2 860 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 RIOK1Q9BRS2 568 aaKnown RBP9.67□□□□□ -0.86
SYNE2-217ENST00000555022 DCP1AQ9NPI6 582 aaPredicted RBP9.67□□□□□ -0.86
SYNE2-217ENST00000555022 BMP2KQ9NSY1 1161 aaPredicted RBP9.67□□□□□ -0.86
SYNE2-217ENST00000555022 BLOC1S4Q9NUP1 217 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 ZMYND8Q9ULU4 1186 aaPredicted RBP9.67□□□□□ -0.86
SYNE2-217ENST00000555022 C15orf41Q9Y2V0 281 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 COL4A3BPQ9Y5P4 624 aa9.67□□□□□ -0.86
SYNE2-217ENST00000555022 GOLGA6L10A0A0M3HER8 536 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 PPP1R12AO14974 1030 aaPredicted RBP9.66□□□□□ -0.86
SYNE2-217ENST00000555022 ORC4O43929 436 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 ATF3P18847 181 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 SLC16A2P36021 539 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 ADAM9Q13443 819 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 RCSD1Q6JBY9 416 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 TRPM8Q7Z2W7 1104 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 BTBD6Q96KE9 485 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 SLC4A9Q96Q91 983 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 OSBPL1AQ9BXW6 950 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 ATP6V0A4Q9HBG4 840 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 IL17RBQ9NRM6 502 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 METTL5Q9NRN9 209 aaKnown RBP9.66□□□□□ -0.86
SYNE2-217ENST00000555022 IRAK4Q9NWZ3 460 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 LMO7Q8WWI1 1683 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 POTEB3A0JP26 581 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 POTECB2RU33 542 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 C21orf2O43822 256 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 FGFR1OPO95684 399 aaKnown RBP9.66□□□□□ -0.86
SYNE2-217ENST00000555022 FGFR2P21802 821 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 TUBP50607 506 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 CASP5P51878 434 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 COASYQ13057 564 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 CRYMQ14894 314 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 SLC18A3Q16572 532 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 FAM26FQ5R3K3 315 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 POTEBQ6S5H4 581 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 NSMFQ6X4W1 530 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 LRRC55Q6ZSA7 311 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 DZIP1Q86YF9 867 aaKnown RBP9.66□□□□□ -0.86
SYNE2-217ENST00000555022 RNF25Q96BH1 459 aaPredicted RBP9.66□□□□□ -0.86
SYNE2-217ENST00000555022 PNMA5Q96PV4 448 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 ZMYND12Q9H0C1 365 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 LUC7LQ9NQ29 371 aaKnown RBP9.66□□□□□ -0.86
SYNE2-217ENST00000555022 PPP1R9AQ9ULJ8 1098 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 KIAA1024Q9UPX6 916 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 IGSF9BQ9UPX0 1349 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 BAZ2AQ9UIF9 1905 aaKnown RBP9.66□□□□□ -0.86
SYNE2-217ENST00000555022 RGPD5Q99666 1765 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 ANKRD63C9JTQ0 380 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 NR2F2P24468 414 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 KCNH2Q12809 1159 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 SPOCK2Q92563 424 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 FAM129AQ9BZQ8 928 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 ACP6Q9NPH0 428 aa9.66□□□□□ -0.86
SYNE2-217ENST00000555022 A0A1B0GVG6 124 aa9.65□□□□□ -0.86
SYNE2-217ENST00000555022 SPDYE5A6NIY4 337 aa9.65□□□□□ -0.86
SYNE2-217ENST00000555022 STXBP3O00186 592 aa9.65□□□□□ -0.86
SYNE2-217ENST00000555022 CALCAP01258 141 aa9.65□□□□□ -0.86
SYNE2-217ENST00000555022 CASP4P49662 377 aa9.65□□□□□ -0.86
SYNE2-217ENST00000555022 AMPD3Q01432 767 aa9.65□□□□□ -0.86
SYNE2-217ENST00000555022 DR1Q01658 176 aa9.65□□□□□ -0.86
SYNE2-217ENST00000555022 KCNA1Q09470 495 aa9.65□□□□□ -0.86
SYNE2-217ENST00000555022 PABPC4Q13310 644 aaKnown RBP eCLIP9.65□□□□□ -0.86
SYNE2-217ENST00000555022 AP1ARQ63HQ0 302 aa9.65□□□□□ -0.86
SYNE2-217ENST00000555022 TLDC1Q6P9B6 456 aa9.65□□□□□ -0.86
SYNE2-217ENST00000555022 MIGA2Q7L4E1 593 aa9.65□□□□□ -0.86
SYNE2-217ENST00000555022 GPBP1Q86WP2 473 aa9.65□□□□□ -0.86
SYNE2-217ENST00000555022 ARMC2Q8NEN0 867 aa9.65□□□□□ -0.86
SYNE2-217ENST00000555022 CTNNBL1Q8WYA6 563 aaPredicted RBP9.65□□□□□ -0.86
SYNE2-217ENST00000555022 TAS2R14Q9NYV8 317 aa9.65□□□□□ -0.86
SYNE2-217ENST00000555022 CPSF2Q9P2I0 782 aaKnown RBP9.65□□□□□ -0.86
SYNE2-217ENST00000555022 NKX1-2Q9UD57 310 aaPredicted RBP9.65□□□□□ -0.86
SYNE2-217ENST00000555022 UBR1Q8IWV7 1749 aa9.65□□□□□ -0.86
SYNE2-217ENST00000555022 DDAH1O94760 285 aa9.65□□□□□ -0.86
SYNE2-217ENST00000555022 CALM1P0DP23 149 aa9.65□□□□□ -0.86
SYNE2-217ENST00000555022 CALM2P0DP24 149 aa9.65□□□□□ -0.86
SYNE2-217ENST00000555022 CALM3P0DP25 149 aa9.65□□□□□ -0.86
SYNE2-217ENST00000555022 HSPA2P54652 639 aa9.65□□□□□ -0.86
SYNE2-217ENST00000555022 POLE2P56282 527 aa9.65□□□□□ -0.86
SYNE2-217ENST00000555022 ASTE1Q2TB18 679 aaPredicted RBP9.65□□□□□ -0.86
SYNE2-217ENST00000555022 RBM26Q5T8P6 1007 aaKnown RBP9.65□□□□□ -0.86
SYNE2-217ENST00000555022 ARL6IP4Q66PJ3 421 aaKnown RBP9.65□□□□□ -0.86
SYNE2-217ENST00000555022 ILDR2Q71H61 639 aa9.65□□□□□ -0.86
SYNE2-217ENST00000555022 NEK8Q86SG6 692 aa9.65□□□□□ -0.86
SYNE2-217ENST00000555022 PALB2Q86YC2 1186 aa9.65□□□□□ -0.86
SYNE2-217ENST00000555022 ZNF444Q8N0Y2 327 aaPredicted RBP9.65□□□□□ -0.86
SYNE2-217ENST00000555022 ZNF483Q8TF39 744 aaPredicted RBP9.65□□□□□ -0.86
SYNE2-217ENST00000555022 RMDN2Q96LZ7 410 aa9.65□□□□□ -0.86
SYNE2-217ENST00000555022 SPATS2LQ9NUQ6 558 aaKnown RBP9.65□□□□□ -0.86
SYNE2-217ENST00000555022 TCRBV7S2A1N4TA0A589 114 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 POTEFA5A3E0 1075 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 SPAG7O75391 227 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 POTEIP0CG38 1075 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 TARSP26639 723 aaKnown RBP9.64□□□□□ -0.87
SYNE2-217ENST00000555022 NCALDP61601 193 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 GRIK5Q16478 980 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 KRT79Q5XKE5 535 aa9.64□□□□□ -0.87
SYNE2-217ENST00000555022 CENPPQ6IPU0 288 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms