RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 RIT2Q99578 217 aa12.05□□□□□ -0.48
SHMT2-213ENST00000554600 ZBED2Q9BTP6 218 aa12.05□□□□□ -0.48
SHMT2-213ENST00000554600 ZNF576Q9H609 170 aa12.05□□□□□ -0.48
SHMT2-213ENST00000554600 SLC28A3Q9HAS3 691 aa12.05□□□□□ -0.48
SHMT2-213ENST00000554600 GABBR1Q9UBS5 961 aa12.05□□□□□ -0.48
SHMT2-213ENST00000554600 ARID2Q68CP9 1835 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 IGKV6D-21A0A0A0MT36 114 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 ABHD14A-ACY1A0A1B0GW23 586 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 KIF28PB7ZC32 967 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 M0QZ92 97 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 EDIL3O43854 480 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 ST18O60284 1047 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 HBP1O60381 514 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 CCNT1O60563 726 aaKnown RBP12.04□□□□□ -0.48
SHMT2-213ENST00000554600 MYOGP15173 224 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 RBM25P49756 843 aaKnown RBP12.04□□□□□ -0.48
SHMT2-213ENST00000554600 JAK3P52333 1124 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 WDR5P61964 334 aaKnown RBP12.04□□□□□ -0.48
SHMT2-213ENST00000554600 GUCY1B3Q02153 619 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 TMEM62Q0P6H9 643 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 NR5A1Q13285 461 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 RABEP1Q15276 862 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 MARCH8Q5T0T0 291 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 PPP2R2DQ66LE6 453 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 KRT40Q6A162 431 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 FAM117BQ6P1L5 589 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 MIER3Q7Z3K6 550 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 DBF4BQ8NFT6 615 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 ATP8B4Q8TF62 1192 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 MYLIPQ8WY64 445 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 GUCD1Q96NT3 240 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 CDX2Q99626 313 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-213ENST00000554600 KIF2CQ99661 725 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 COL25A1Q9BXS0 654 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-213ENST00000554600 UNC45AQ9H3U1 944 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 DISC1Q9NRI5 854 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 YBX2Q9Y2T7 364 aaKnown RBP12.04□□□□□ -0.48
SHMT2-213ENST00000554600 PCDHA11Q9Y5I1 949 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 TTC3P53804 2025 aa12.04□□□□□ -0.48
SHMT2-213ENST00000554600 PRRC2BQ5JSZ5 2229 aaKnown RBP12.03□□□□□ -0.48
SHMT2-213ENST00000554600 CYP3A7-CYP3A51PA0A087WV96 503 aa12.03□□□□□ -0.48
SHMT2-213ENST00000554600 MBLAC1A4D2B0 266 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-213ENST00000554600 FAM205CA6NFA0 338 aa12.03□□□□□ -0.48
SHMT2-213ENST00000554600 SLC37A4O43826 429 aa12.03□□□□□ -0.48
SHMT2-213ENST00000554600 TLL1O43897 1013 aa12.03□□□□□ -0.48
SHMT2-213ENST00000554600 EFCAB14O75071 495 aa12.03□□□□□ -0.48
SHMT2-213ENST00000554600 MMP1P03956 469 aa12.03□□□□□ -0.48
SHMT2-213ENST00000554600 GHRP10912 638 aa12.03□□□□□ -0.48
SHMT2-213ENST00000554600 CYP3A7P24462 503 aa12.03□□□□□ -0.48
SHMT2-213ENST00000554600 SFNP31947 248 aa12.03□□□□□ -0.48
SHMT2-213ENST00000554600 DEFB103AP81534 67 aa12.03□□□□□ -0.48
SHMT2-213ENST00000554600 MRPS6P82932 125 aaKnown RBP12.03□□□□□ -0.48
SHMT2-213ENST00000554600 ST3GAL1Q11201 340 aa12.03□□□□□ -0.48
SHMT2-213ENST00000554600 SAFBQ15424 915 aaKnown RBP eCLIP12.03□□□□□ -0.48
SHMT2-213ENST00000554600 TCTN1Q2MV58 587 aa12.03□□□□□ -0.48
SHMT2-213ENST00000554600 ZNF484Q5JVG2 852 aa12.03□□□□□ -0.48
SHMT2-213ENST00000554600 MTHFD1LQ6UB35 978 aa12.03□□□□□ -0.48
SHMT2-213ENST00000554600 MOXD1Q6UVY6 613 aa12.03□□□□□ -0.48
SHMT2-213ENST00000554600 TMCO2Q7Z6W1 182 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-213ENST00000554600 HERC6Q8IVU3 1022 aa12.03□□□□□ -0.48
SHMT2-213ENST00000554600 DIS3L2Q8IYB7 885 aaKnown RBP12.03□□□□□ -0.48
SHMT2-213ENST00000554600 FAM184AQ8NB25 1140 aa12.03□□□□□ -0.48
SHMT2-213ENST00000554600 PHOSPHO2Q8TCD6 241 aa12.03□□□□□ -0.48
SHMT2-213ENST00000554600 C8orf76Q96K31 380 aa12.03□□□□□ -0.48
SHMT2-213ENST00000554600 NAP1L4Q99733 375 aaKnown RBP12.03□□□□□ -0.48
SHMT2-213ENST00000554600 SH2B1Q9NRF2 756 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-213ENST00000554600 STXBP5LQ9Y2K9 1186 aa12.03□□□□□ -0.48
SHMT2-213ENST00000554600 CDY2AQ9Y6F7 541 aa12.03□□□□□ -0.48
SHMT2-213ENST00000554600 COL1A2P08123 1366 aa12.03□□□□□ -0.48
SHMT2-213ENST00000554600 BTBD18B2RXH4 712 aa12.02□□□□□ -0.49
SHMT2-213ENST00000554600 PSMD10O75832 226 aa12.02□□□□□ -0.49
SHMT2-213ENST00000554600 CHRNA1P02708 482 aa12.02□□□□□ -0.49
SHMT2-213ENST00000554600 AMHP03971 560 aa12.02□□□□□ -0.49
SHMT2-213ENST00000554600 RPLP2P05387 115 aaKnown RBP12.02□□□□□ -0.49
SHMT2-213ENST00000554600 FOSL2P15408 326 aa12.02□□□□□ -0.49
SHMT2-213ENST00000554600 GCFC2P16383 781 aaKnown RBP12.02□□□□□ -0.49
SHMT2-213ENST00000554600 ATP2B1P20020 1258 aa12.02□□□□□ -0.49
SHMT2-213ENST00000554600 KLRC1P26715 233 aa12.02□□□□□ -0.49
SHMT2-213ENST00000554600 GNL2Q13823 731 aaKnown RBP12.02□□□□□ -0.49
SHMT2-213ENST00000554600 GRIN2CQ14957 1233 aa12.02□□□□□ -0.49
SHMT2-213ENST00000554600 PLEKHG4Q58EX7 1191 aa12.02□□□□□ -0.49
SHMT2-213ENST00000554600 FAM26DQ5JW98 314 aa12.02□□□□□ -0.49
SHMT2-213ENST00000554600 IER5Q5VY09 327 aa12.02□□□□□ -0.49
SHMT2-213ENST00000554600 MYOCDQ8IZQ8 938 aa12.02□□□□□ -0.49
SHMT2-213ENST00000554600 METTL13Q8N6R0 699 aa12.02□□□□□ -0.49
SHMT2-213ENST00000554600 BBXQ8WY36 941 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-213ENST00000554600 FAM167AQ96KS9 214 aa12.02□□□□□ -0.49
SHMT2-213ENST00000554600 GAS2L1Q99501 681 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-213ENST00000554600 LLPHQ9BRT6 129 aaKnown RBP12.02□□□□□ -0.49
SHMT2-213ENST00000554600 IFIH1Q9BYX4 1025 aaKnown RBP12.02□□□□□ -0.49
SHMT2-213ENST00000554600 OSBPL7Q9BZF2 842 aa12.02□□□□□ -0.49
SHMT2-213ENST00000554600 PRDM12Q9H4Q4 367 aa12.02□□□□□ -0.49
SHMT2-213ENST00000554600 NRBP2Q9NSY0 501 aa12.02□□□□□ -0.49
SHMT2-213ENST00000554600 GINS2Q9Y248 185 aa12.02□□□□□ -0.49
SHMT2-213ENST00000554600 PCDHA2Q9Y5H9 948 aa12.02□□□□□ -0.49
SHMT2-213ENST00000554600 MAFBQ9Y5Q3 323 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-213ENST00000554600 COL4A4P53420 1690 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-213ENST00000554600 SMIM35A0A1B0GVV1 85 aa12.01□□□□□ -0.49
SHMT2-213ENST00000554600 BAG4O95429 457 aaKnown RBP12.01□□□□□ -0.49
SHMT2-213ENST00000554600 CA3P07451 260 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms