RNA–Protein interactions for RNA: ENST00000554482.1

NPC2-205, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2

Gene NPC2, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-205ENST00000554482 LINC01599Q8WXQ3 324 aa12.75□□□□□ -0.37
NPC2-205ENST00000554482 CLP1Q92989 425 aaKnown RBP12.75□□□□□ -0.37
NPC2-205ENST00000554482 FTHL17Q9BXU8 183 aa12.75□□□□□ -0.37
NPC2-205ENST00000554482 ALG13Q9NP73 1137 aaKnown RBP12.75□□□□□ -0.37
NPC2-205ENST00000554482 RIC8AQ9NPQ8 531 aa12.75□□□□□ -0.37
NPC2-205ENST00000554482 MRPL42Q9Y6G3 142 aaKnown RBP12.75□□□□□ -0.37
NPC2-205ENST00000554482 NFASCO94856 1347 aa12.74□□□□□ -0.37
NPC2-205ENST00000554482 IGSF9BQ9UPX0 1349 aa12.74□□□□□ -0.37
NPC2-205ENST00000554482 POTEB3A0JP26 581 aa12.74□□□□□ -0.37
NPC2-205ENST00000554482 GOLGA8AA7E2F4 631 aa12.74□□□□□ -0.37
NPC2-205ENST00000554482 GOLGA8BA8MQT2 603 aa12.74□□□□□ -0.37
NPC2-205ENST00000554482 PRR33A8MZF0 331 aa12.74□□□□□ -0.37
NPC2-205ENST00000554482 ZBTB43O43298 467 aa12.74□□□□□ -0.37
NPC2-205ENST00000554482 DCXO43602 365 aa12.74□□□□□ -0.37
NPC2-205ENST00000554482 FOSP01100 380 aaPredicted RBP12.74□□□□□ -0.37
NPC2-205ENST00000554482 MMP1P03956 469 aa12.74□□□□□ -0.37
NPC2-205ENST00000554482 STAG3L1P0CL83 205 aa12.74□□□□□ -0.37
NPC2-205ENST00000554482 ARP10275 920 aa12.74□□□□□ -0.37
NPC2-205ENST00000554482 SCG2P13521 617 aa12.74□□□□□ -0.37
NPC2-205ENST00000554482 GTF2F1P35269 517 aaKnown RBP eCLIP12.74□□□□□ -0.37
NPC2-205ENST00000554482 ZP2Q05996 745 aa12.74□□□□□ -0.37
NPC2-205ENST00000554482 ITGB3BPQ13352 177 aaPredicted RBP12.74□□□□□ -0.37
NPC2-205ENST00000554482 TMEM266Q2M3C6 531 aa12.74□□□□□ -0.37
NPC2-205ENST00000554482 CEP55Q53EZ4 464 aa12.74□□□□□ -0.37
NPC2-205ENST00000554482 TYW1BQ6NUM6 668 aa12.74□□□□□ -0.37
NPC2-205ENST00000554482 POTEBQ6S5H4 581 aa12.74□□□□□ -0.37
NPC2-205ENST00000554482 NPAS4Q8IUM7 802 aa12.74□□□□□ -0.37
NPC2-205ENST00000554482 CMTR2Q8IYT2 770 aaKnown RBP12.74□□□□□ -0.37
NPC2-205ENST00000554482 PPP2R3CQ969Q6 453 aa12.74□□□□□ -0.37
NPC2-205ENST00000554482 ZNF689Q96CS4 500 aaPredicted RBP12.74□□□□□ -0.37
NPC2-205ENST00000554482 NEK1Q96PY6 1258 aa12.74□□□□□ -0.37
NPC2-205ENST00000554482 PLVAPQ9BX97 442 aa12.74□□□□□ -0.37
NPC2-205ENST00000554482 AGO4Q9HCK5 861 aaKnown RBP12.74□□□□□ -0.37
NPC2-205ENST00000554482 TMEM260Q9NX78 707 aa12.74□□□□□ -0.37
NPC2-205ENST00000554482 PRKAG3Q9UGI9 489 aa12.74□□□□□ -0.37
NPC2-205ENST00000554482 LRFN2Q9ULH4 789 aa12.74□□□□□ -0.37
NPC2-205ENST00000554482 PADI3Q9ULW8 664 aa12.74□□□□□ -0.37
NPC2-205ENST00000554482 KIAA1671Q9BY89 1806 aa12.74□□□□□ -0.37
NPC2-205ENST00000554482 TTC3P53804 2025 aa12.73□□□□□ -0.37
NPC2-205ENST00000554482 LOXHD1Q8IVV2 1947 aa12.73□□□□□ -0.37
NPC2-205ENST00000554482 SMCO2A6NFE2 343 aa12.73□□□□□ -0.37
NPC2-205ENST00000554482 STXBP3O00186 592 aa12.73□□□□□ -0.37
NPC2-205ENST00000554482 LINC01565O15544 149 aa12.73□□□□□ -0.37
NPC2-205ENST00000554482 TBX10O75333 385 aa12.73□□□□□ -0.37
NPC2-205ENST00000554482 LTBRP36941 435 aa12.73□□□□□ -0.37
NPC2-205ENST00000554482 NDUFV1P49821 464 aa12.73□□□□□ -0.37
NPC2-205ENST00000554482 FGD1P98174 961 aa12.73□□□□□ -0.37
NPC2-205ENST00000554482 KRT76Q01546 638 aa12.73□□□□□ -0.37
NPC2-205ENST00000554482 DLX2Q07687 328 aaPredicted RBP12.73□□□□□ -0.37
NPC2-205ENST00000554482 NFX1Q12986 1120 aaKnown RBP12.73□□□□□ -0.37
NPC2-205ENST00000554482 COL19A1Q14993 1142 aa12.73□□□□□ -0.37
NPC2-205ENST00000554482 FAM160B1Q5W0V3 765 aa12.73□□□□□ -0.37
NPC2-205ENST00000554482 PLPPR4Q7Z2D5 763 aa12.73□□□□□ -0.37
NPC2-205ENST00000554482 ADHFE1Q8IWW8 467 aa12.73□□□□□ -0.37
NPC2-205ENST00000554482 PPP1R16BQ96T49 567 aa12.73□□□□□ -0.37
NPC2-205ENST00000554482 CELF4Q9BZC1 486 aaKnown RBP12.73□□□□□ -0.37
NPC2-205ENST00000554482 PLAGL2Q9UPG8 496 aa12.73□□□□□ -0.37
NPC2-205ENST00000554482 ARIH1Q9Y4X5 557 aaPredicted RBP12.73□□□□□ -0.37
NPC2-205ENST00000554482 PCDHA2Q9Y5H9 948 aa12.73□□□□□ -0.37
NPC2-205ENST00000554482 SQORQ9Y6N5 450 aa12.73□□□□□ -0.37
NPC2-205ENST00000554482 V9GY48 417 aaPredicted RBP12.73□□□□□ -0.37
NPC2-205ENST00000554482 KLF18A0A0U1RQI7 1052 aa12.72□□□□□ -0.37
NPC2-205ENST00000554482 SMIM35A0A1B0GVV1 85 aa12.72□□□□□ -0.37
NPC2-205ENST00000554482 hCG_1984214I3L0E3 225 aa12.72□□□□□ -0.37
NPC2-205ENST00000554482 ITGB1P05556 798 aa12.72□□□□□ -0.37
NPC2-205ENST00000554482 SREBF1P36956 1147 aa12.72□□□□□ -0.37
NPC2-205ENST00000554482 GATMP50440 423 aa12.72□□□□□ -0.37
NPC2-205ENST00000554482 AP3B2Q13367 1082 aa12.72□□□□□ -0.37
NPC2-205ENST00000554482 SPOUT1Q5T280 376 aaKnown RBP12.72□□□□□ -0.37
NPC2-205ENST00000554482 JAKMIP3Q5VZ66 844 aa12.72□□□□□ -0.37
NPC2-205ENST00000554482 MTHFD1LQ6UB35 978 aa12.72□□□□□ -0.37
NPC2-205ENST00000554482 TRMT1LQ7Z2T5 733 aaKnown RBP12.72□□□□□ -0.37
NPC2-205ENST00000554482 RTN4RL1Q86UN2 441 aaPredicted RBP12.72□□□□□ -0.37
NPC2-205ENST00000554482 CKAP2LQ8IYA6 745 aa12.72□□□□□ -0.37
NPC2-205ENST00000554482 ZNF713Q8N859 430 aaPredicted RBP12.72□□□□□ -0.37
NPC2-205ENST00000554482 P2RX5Q93086 422 aa12.72□□□□□ -0.37
NPC2-205ENST00000554482 TCEAL9Q9UHQ7 104 aa12.72□□□□□ -0.37
NPC2-205ENST00000554482 BRPF3Q9ULD4 1205 aa12.72□□□□□ -0.37
NPC2-205ENST00000554482 MYO7AQ13402 2215 aa12.72□□□□□ -0.37
NPC2-205ENST00000554482 DENND3A2RUS2 1198 aa12.71□□□□□ -0.37
NPC2-205ENST00000554482 MBTPS2O43462 519 aa12.71□□□□□ -0.37
NPC2-205ENST00000554482 PPFIA3O75145 1194 aa12.71□□□□□ -0.37
NPC2-205ENST00000554482 RPS6KA5O75582 802 aa12.71□□□□□ -0.37
NPC2-205ENST00000554482 CCNE2O96020 404 aa12.71□□□□□ -0.37
NPC2-205ENST00000554482 KLRC1P26715 233 aa12.71□□□□□ -0.37
NPC2-205ENST00000554482 IRS1P35568 1242 aa12.71□□□□□ -0.37
NPC2-205ENST00000554482 SLC26A2P50443 739 aa12.71□□□□□ -0.37
NPC2-205ENST00000554482 SMAD4Q13485 552 aaKnown RBP12.71□□□□□ -0.37
NPC2-205ENST00000554482 SMAD2Q15796 467 aaKnown RBP12.71□□□□□ -0.37
NPC2-205ENST00000554482 CTC1Q2NKJ3 1217 aa12.71□□□□□ -0.37
NPC2-205ENST00000554482 MIS18BP1Q6P0N0 1132 aa12.71□□□□□ -0.37
NPC2-205ENST00000554482 PDXDC2PQ6P474 469 aa12.71□□□□□ -0.37
NPC2-205ENST00000554482 DHX32Q7L7V1 743 aaKnown RBP12.71□□□□□ -0.37
NPC2-205ENST00000554482 SKAP1Q86WV1 359 aa12.71□□□□□ -0.37
NPC2-205ENST00000554482 PLA2G4DQ86XP0 818 aa12.71□□□□□ -0.37
NPC2-205ENST00000554482 CCDC60Q8IWA6 550 aaPredicted RBP12.71□□□□□ -0.37
NPC2-205ENST00000554482 NME8Q8N427 588 aa12.71□□□□□ -0.37
NPC2-205ENST00000554482 KLHL23Q8NBE8 558 aa12.71□□□□□ -0.37
NPC2-205ENST00000554482 ATP8B4Q8TF62 1192 aa12.71□□□□□ -0.37
NPC2-205ENST00000554482 POP1Q99575 1024 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms