RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 STXBP5LQ9Y2K9 1186 aa14.77□□□□□ -0.05
SHMT2-211ENST00000554310 PCDHA11Q9Y5I1 949 aa14.77□□□□□ -0.05
SHMT2-211ENST00000554310 PCDHA10Q9Y5I2 948 aa14.77□□□□□ -0.05
SHMT2-211ENST00000554310 HBP1O60381 514 aa14.76□□□□□ -0.05
SHMT2-211ENST00000554310 WDR5P61964 334 aaKnown RBP14.76□□□□□ -0.05
SHMT2-211ENST00000554310 IGBP1P78318 339 aa14.76□□□□□ -0.05
SHMT2-211ENST00000554310 TRIM29Q14134 588 aa14.76□□□□□ -0.05
SHMT2-211ENST00000554310 RUFY4Q6ZNE9 571 aa14.76□□□□□ -0.05
SHMT2-211ENST00000554310 RDM1Q8NG50 284 aa14.76□□□□□ -0.05
SHMT2-211ENST00000554310 FAM167AQ96KS9 214 aa14.76□□□□□ -0.05
SHMT2-211ENST00000554310 UIMC1Q96RL1 719 aa14.76□□□□□ -0.05
SHMT2-211ENST00000554310 LLPHQ9BRT6 129 aaKnown RBP14.76□□□□□ -0.05
SHMT2-211ENST00000554310 SAMM50Q9Y512 469 aa14.76□□□□□ -0.05
SHMT2-211ENST00000554310 MAFBQ9Y5Q3 323 aaPredicted RBP14.76□□□□□ -0.05
SHMT2-211ENST00000554310 CHD9Q3L8U1 2897 aa14.76□□□□□ -0.05
SHMT2-211ENST00000554310 CDH23Q9H251 3354 aa14.75□□□□□ -0.05
SHMT2-211ENST00000554310 DTNBO60941 627 aa14.75□□□□□ -0.05
SHMT2-211ENST00000554310 MMP1P03956 469 aa14.75□□□□□ -0.05
SHMT2-211ENST00000554310 IKBKEQ14164 716 aa14.75□□□□□ -0.05
SHMT2-211ENST00000554310 LETM2Q2VYF4 491 aa14.75□□□□□ -0.05
SHMT2-211ENST00000554310 PLEKHG4Q58EX7 1191 aa14.75□□□□□ -0.05
SHMT2-211ENST00000554310 PPP4R3AQ6IN85 833 aa14.75□□□□□ -0.05
SHMT2-211ENST00000554310 SWSAP1Q6NVH7 229 aa14.75□□□□□ -0.05
SHMT2-211ENST00000554310 PIK3AP1Q6ZUJ8 805 aa14.75□□□□□ -0.05
SHMT2-211ENST00000554310 HERC6Q8IVU3 1022 aa14.75□□□□□ -0.05
SHMT2-211ENST00000554310 CCDC83Q8IWF9 413 aa14.75□□□□□ -0.05
SHMT2-211ENST00000554310 ETNPPLQ8TBG4 499 aa14.75□□□□□ -0.05
SHMT2-211ENST00000554310 OXER1Q8TDS5 423 aa14.75□□□□□ -0.05
SHMT2-211ENST00000554310 BBXQ8WY36 941 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-211ENST00000554310 SEPT8Q92599 483 aa14.75□□□□□ -0.05
SHMT2-211ENST00000554310 ZNF576Q9H609 170 aa14.75□□□□□ -0.05
SHMT2-211ENST00000554310 SLC28A3Q9HAS3 691 aa14.75□□□□□ -0.05
SHMT2-211ENST00000554310 DISC1Q9NRI5 854 aa14.75□□□□□ -0.05
SHMT2-211ENST00000554310 PCDHA2Q9Y5H9 948 aa14.75□□□□□ -0.05
SHMT2-211ENST00000554310 SMIM35A0A1B0GVV1 85 aa14.74□□□□□ -0.05
SHMT2-211ENST00000554310 CHMP2AO43633 222 aa14.74□□□□□ -0.05
SHMT2-211ENST00000554310 SLC37A4O43826 429 aa14.74□□□□□ -0.05
SHMT2-211ENST00000554310 ST18O60284 1047 aa14.74□□□□□ -0.05
SHMT2-211ENST00000554310 PSMD10O75832 226 aa14.74□□□□□ -0.05
SHMT2-211ENST00000554310 MRPS6P82932 125 aaKnown RBP14.74□□□□□ -0.05
SHMT2-211ENST00000554310 MGAT3Q09327 533 aa14.74□□□□□ -0.05
SHMT2-211ENST00000554310 TCTN1Q2MV58 587 aa14.74□□□□□ -0.05
SHMT2-211ENST00000554310 ZNF484Q5JVG2 852 aa14.74□□□□□ -0.05
SHMT2-211ENST00000554310 CKAP2LQ8IYA6 745 aa14.74□□□□□ -0.05
SHMT2-211ENST00000554310 TRAPPC12Q8WVT3 735 aa14.74□□□□□ -0.05
SHMT2-211ENST00000554310 DNAJB3Q8WWF6 145 aa14.74□□□□□ -0.05
SHMT2-211ENST00000554310 APBB2Q92870 758 aa14.74□□□□□ -0.05
SHMT2-211ENST00000554310 TNFRSF25Q93038 417 aa14.74□□□□□ -0.05
SHMT2-211ENST00000554310 CDX2Q99626 313 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-211ENST00000554310 UNC45AQ9H3U1 944 aa14.74□□□□□ -0.05
SHMT2-211ENST00000554310 GABBR1Q9UBS5 961 aa14.74□□□□□ -0.05
SHMT2-211ENST00000554310 CEP131Q9UPN4 1083 aa14.74□□□□□ -0.05
SHMT2-211ENST00000554310 YBX2Q9Y2T7 364 aaKnown RBP14.74□□□□□ -0.05
SHMT2-211ENST00000554310 MYO9BQ13459 2157 aa14.74□□□□□ -0.05
SHMT2-211ENST00000554310 KIF28PB7ZC32 967 aa14.73□□□□□ -0.05
SHMT2-211ENST00000554310 M0QZ92 97 aa14.73□□□□□ -0.05
SHMT2-211ENST00000554310 TBX3O15119 743 aa14.73□□□□□ -0.05
SHMT2-211ENST00000554310 CCNT1O60563 726 aaKnown RBP14.73□□□□□ -0.05
SHMT2-211ENST00000554310 CHRNA1P02708 482 aa14.73□□□□□ -0.05
SHMT2-211ENST00000554310 ATP4AP20648 1035 aa14.73□□□□□ -0.05
SHMT2-211ENST00000554310 RABGGTBP53611 331 aa14.73□□□□□ -0.05
SHMT2-211ENST00000554310 HMGN5P82970 282 aaKnown RBP14.73□□□□□ -0.05
SHMT2-211ENST00000554310 NR5A1Q13285 461 aa14.73□□□□□ -0.05
SHMT2-211ENST00000554310 MKRN4PQ13434 485 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-211ENST00000554310 IER5Q5VY09 327 aa14.73□□□□□ -0.05
SHMT2-211ENST00000554310 PPP2R2DQ66LE6 453 aa14.73□□□□□ -0.05
SHMT2-211ENST00000554310 KRT40Q6A162 431 aa14.73□□□□□ -0.05
SHMT2-211ENST00000554310 MTHFD1LQ6UB35 978 aa14.73□□□□□ -0.05
SHMT2-211ENST00000554310 B3GNT9Q6UX72 402 aa14.73□□□□□ -0.05
SHMT2-211ENST00000554310 DIS3L2Q8IYB7 885 aaKnown RBP14.73□□□□□ -0.05
SHMT2-211ENST00000554310 DBF4BQ8NFT6 615 aa14.73□□□□□ -0.05
SHMT2-211ENST00000554310 FAM20AQ96MK3 541 aa14.73□□□□□ -0.05
SHMT2-211ENST00000554310 IFIH1Q9BYX4 1025 aaKnown RBP14.73□□□□□ -0.05
SHMT2-211ENST00000554310 FAM49AQ9H0Q0 323 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-211ENST00000554310 NKX2-4Q9H2Z4 354 aa14.73□□□□□ -0.05
SHMT2-211ENST00000554310 KCNMB3Q9NPA1 279 aa14.73□□□□□ -0.05
SHMT2-211ENST00000554310 ZBTB42B2RXF5 422 aa14.72□□□□□ -0.05
SHMT2-211ENST00000554310 AMHP03971 560 aa14.72□□□□□ -0.05
SHMT2-211ENST00000554310 OATP04181 439 aa14.72□□□□□ -0.05
SHMT2-211ENST00000554310 DEFB103AP81534 67 aa14.72□□□□□ -0.05
SHMT2-211ENST00000554310 SAFBQ15424 915 aaKnown RBP eCLIP14.72□□□□□ -0.05
SHMT2-211ENST00000554310 EARS2Q5JPH6 523 aaKnown RBP14.72□□□□□ -0.05
SHMT2-211ENST00000554310 MIER3Q7Z3K6 550 aa14.72□□□□□ -0.05
SHMT2-211ENST00000554310 GJA10Q969M2 543 aa14.72□□□□□ -0.05
SHMT2-211ENST00000554310 ZBTB10Q96DT7 871 aa14.72□□□□□ -0.05
SHMT2-211ENST00000554310 TRPV2Q9Y5S1 764 aa14.72□□□□□ -0.05
SHMT2-211ENST00000554310 CDY2AQ9Y6F7 541 aa14.72□□□□□ -0.05
SHMT2-211ENST00000554310 EVPLQ92817 2033 aa14.71□□□□□ -0.05
SHMT2-211ENST00000554310 COL4A6Q14031 1691 aa14.71□□□□□ -0.05
SHMT2-211ENST00000554310 KDM3AQ9Y4C1 1321 aa14.71□□□□□ -0.05
SHMT2-211ENST00000554310 LOXHD1Q8IVV2 1947 aa14.71□□□□□ -0.05
SHMT2-211ENST00000554310 FAM205CA6NFA0 338 aa14.71□□□□□ -0.05
SHMT2-211ENST00000554310 GJB5O95377 273 aa14.71□□□□□ -0.05
SHMT2-211ENST00000554310 C22orf31O95567 290 aa14.71□□□□□ -0.05
SHMT2-211ENST00000554310 CA3P07451 260 aa14.71□□□□□ -0.05
SHMT2-211ENST00000554310 GHRP10912 638 aa14.71□□□□□ -0.05
SHMT2-211ENST00000554310 FOSL2P15408 326 aa14.71□□□□□ -0.05
SHMT2-211ENST00000554310 KLRC1P26715 233 aa14.71□□□□□ -0.05
SHMT2-211ENST00000554310 FOSBP53539 338 aa14.71□□□□□ -0.05
SHMT2-211ENST00000554310 PRKCEQ02156 737 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms