RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 ESYT3A0FGR9 886 aa6.96□□□□□ -1.3
ATXN3-225ENST00000554214 B4E1Z4 1266 aa6.96□□□□□ -1.3
ATXN3-225ENST00000554214 H0Y858 1186 aa6.96□□□□□ -1.3
ATXN3-225ENST00000554214 B4GALT3O60512 393 aa6.96□□□□□ -1.3
ATXN3-225ENST00000554214 B4GALT4O60513 344 aa6.96□□□□□ -1.3
ATXN3-225ENST00000554214 HERVK_113P62684 666 aa6.96□□□□□ -1.3
ATXN3-225ENST00000554214 PKN3Q6P5Z2 889 aa6.96□□□□□ -1.3
ATXN3-225ENST00000554214 DPP8Q6V1X1 898 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-225ENST00000554214 DDX53Q86TM3 631 aaKnown RBP6.96□□□□□ -1.3
ATXN3-225ENST00000554214 KBTBD2Q8IY47 623 aa6.96□□□□□ -1.3
ATXN3-225ENST00000554214 GALNT8Q9NY28 637 aa6.96□□□□□ -1.3
ATXN3-225ENST00000554214 TNPO3Q9Y5L0 923 aaKnown RBP6.96□□□□□ -1.3
ATXN3-225ENST00000554214 ZNF536O15090 1300 aa6.96□□□□□ -1.3
ATXN3-225ENST00000554214 OPA1O60313 960 aa6.95□□□□□ -1.3
ATXN3-225ENST00000554214 ASLP04424 464 aa6.95□□□□□ -1.3
ATXN3-225ENST00000554214 PTGS1P23219 599 aa6.95□□□□□ -1.3
ATXN3-225ENST00000554214 BUD31P41223 144 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-225ENST00000554214 TBC1D10BQ4KMP7 808 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-225ENST00000554214 Q6ZUG5 572 aa6.95□□□□□ -1.3
ATXN3-225ENST00000554214 NOSTRINQ8IVI9 506 aa6.95□□□□□ -1.3
ATXN3-225ENST00000554214 KCNH7Q9NS40 1196 aa6.95□□□□□ -1.3
ATXN3-225ENST00000554214 SAMD15Q9P1V8 674 aa6.95□□□□□ -1.3
ATXN3-225ENST00000554214 BTBD7Q9P203 1132 aa6.95□□□□□ -1.3
ATXN3-225ENST00000554214 ADAM29Q9UKF5 820 aa6.95□□□□□ -1.3
ATXN3-225ENST00000554214 M0R2C6 588 aa6.94□□□□□ -1.3
ATXN3-225ENST00000554214 DNAJC8O75937 253 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-225ENST00000554214 PLATP00750 562 aa6.94□□□□□ -1.3
ATXN3-225ENST00000554214 ITGB3P05106 788 aa6.94□□□□□ -1.3
ATXN3-225ENST00000554214 MMEP08473 750 aa6.94□□□□□ -1.3
ATXN3-225ENST00000554214 SDSP20132 328 aa6.94□□□□□ -1.3
ATXN3-225ENST00000554214 AOAHP28039 575 aa6.94□□□□□ -1.3
ATXN3-225ENST00000554214 IGFALSP35858 605 aa6.94□□□□□ -1.3
ATXN3-225ENST00000554214 TMEM132BQ14DG7 1078 aa6.94□□□□□ -1.3
ATXN3-225ENST00000554214 FSTL4Q6MZW2 842 aa6.94□□□□□ -1.3
ATXN3-225ENST00000554214 ZCCHC8Q6NZY4 707 aaKnown RBP6.94□□□□□ -1.3
ATXN3-225ENST00000554214 PLEKHH3Q7Z736 793 aa6.94□□□□□ -1.3
ATXN3-225ENST00000554214 DLG3Q92796 817 aa6.94□□□□□ -1.3
ATXN3-225ENST00000554214 INCENPQ9NQS7 918 aa6.94□□□□□ -1.3
ATXN3-225ENST00000554214 UCKL1Q9NWZ5 548 aa6.94□□□□□ -1.3
ATXN3-225ENST00000554214 B3GALT1Q9Y5Z6 326 aa6.94□□□□□ -1.3
ATXN3-225ENST00000554214 CFTRP13569 1480 aa6.93□□□□□ -1.3
ATXN3-225ENST00000554214 RFPL3O75679 317 aa6.93□□□□□ -1.3
ATXN3-225ENST00000554214 ZBTB48P10074 688 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-225ENST00000554214 MC4RP32245 332 aa6.93□□□□□ -1.3
ATXN3-225ENST00000554214 PPP2CBP62714 309 aa6.93□□□□□ -1.3
ATXN3-225ENST00000554214 PPP2CAP67775 309 aa6.93□□□□□ -1.3
ATXN3-225ENST00000554214 PABPC4Q13310 644 aaKnown RBP eCLIP6.93□□□□□ -1.3
ATXN3-225ENST00000554214 SURF1Q15526 300 aa6.93□□□□□ -1.3
ATXN3-225ENST00000554214 ARHGAP44Q17R89 818 aa6.93□□□□□ -1.3
ATXN3-225ENST00000554214 C21orf62-AS1Q17RA5 79 aa6.93□□□□□ -1.3
ATXN3-225ENST00000554214 TM4SF20Q53R12 229 aa6.93□□□□□ -1.3
ATXN3-225ENST00000554214 HOMER1Q86YM7 354 aa6.93□□□□□ -1.3
ATXN3-225ENST00000554214 AJUBAQ96IF1 538 aa6.93□□□□□ -1.3
ATXN3-225ENST00000554214 GBP4Q96PP9 640 aa6.93□□□□□ -1.3
ATXN3-225ENST00000554214 RBM15Q96T37 977 aaKnown RBP eCLIP6.93□□□□□ -1.3
ATXN3-225ENST00000554214 KRTAP4-7Q9BYR0 210 aa6.93□□□□□ -1.3
ATXN3-225ENST00000554214 EIF4G3O43432 1585 aaKnown RBP6.92□□□□□ -1.3
ATXN3-225ENST00000554214 K7ESM1 405 aa6.92□□□□□ -1.3
ATXN3-225ENST00000554214 FOXP2O15409 715 aa6.92□□□□□ -1.3
ATXN3-225ENST00000554214 HIP1RO75146 1068 aa6.92□□□□□ -1.3
ATXN3-225ENST00000554214 GLRX3O76003 335 aaKnown RBP6.92□□□□□ -1.3
ATXN3-225ENST00000554214 KRT37O76014 449 aa6.92□□□□□ -1.3
ATXN3-225ENST00000554214 FLT3P36888 993 aa6.92□□□□□ -1.3
ATXN3-225ENST00000554214 IRF9Q00978 393 aa6.92□□□□□ -1.3
ATXN3-225ENST00000554214 ZNF460Q14592 562 aa6.92□□□□□ -1.3
ATXN3-225ENST00000554214 TCEA2Q15560 299 aa6.92□□□□□ -1.3
ATXN3-225ENST00000554214 WDR72Q3MJ13 1102 aa6.92□□□□□ -1.3
ATXN3-225ENST00000554214 ARHGEF18Q6ZSZ5 1173 aa6.92□□□□□ -1.3
ATXN3-225ENST00000554214 UBE2R2Q712K3 238 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-225ENST00000554214 LIMS2Q7Z4I7 341 aa6.92□□□□□ -1.3
ATXN3-225ENST00000554214 PRRT2Q7Z6L0 340 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-225ENST00000554214 SYNPOQ8N3V7 929 aa6.92□□□□□ -1.3
ATXN3-225ENST00000554214 WDR48Q8TAF3 677 aa6.92□□□□□ -1.3
ATXN3-225ENST00000554214 ASB15Q8WXK1 588 aa6.92□□□□□ -1.3
ATXN3-225ENST00000554214 JADE2Q9NQC1 790 aa6.92□□□□□ -1.3
ATXN3-225ENST00000554214 AQRO60306 1485 aaKnown RBP eCLIP6.92□□□□□ -1.3
ATXN3-225ENST00000554214 PRAMEF22A3QJZ6 481 aa6.91□□□□□ -1.3
ATXN3-225ENST00000554214 LAMTOR5O43504 91 aa6.91□□□□□ -1.3
ATXN3-225ENST00000554214 MPIG6BO95866 241 aa6.91□□□□□ -1.3
ATXN3-225ENST00000554214 POLD1P28340 1107 aa6.91□□□□□ -1.3
ATXN3-225ENST00000554214 ECE1P42892 770 aa6.91□□□□□ -1.3
ATXN3-225ENST00000554214 MECP2P51608 486 aaKnown RBP6.91□□□□□ -1.3
ATXN3-225ENST00000554214 GLB1LQ6UWU2 654 aa6.91□□□□□ -1.3
ATXN3-225ENST00000554214 OTOP1Q7RTM1 612 aa6.91□□□□□ -1.3
ATXN3-225ENST00000554214 HIPK4Q8NE63 616 aa6.91□□□□□ -1.3
ATXN3-225ENST00000554214 APPBP2Q92624 585 aa6.91□□□□□ -1.3
ATXN3-225ENST00000554214 WNK4Q96J92 1243 aa6.91□□□□□ -1.3
ATXN3-225ENST00000554214 BOCQ9BWV1 1114 aa6.91□□□□□ -1.3
ATXN3-225ENST00000554214 BTBD2Q9BX70 525 aa6.91□□□□□ -1.3
ATXN3-225ENST00000554214 AMNQ9BXJ7 453 aa6.91□□□□□ -1.3
ATXN3-225ENST00000554214 KATNBL1Q9H079 304 aa6.91□□□□□ -1.3
ATXN3-225ENST00000554214 FANCLQ9NW38 375 aa6.91□□□□□ -1.3
ATXN3-225ENST00000554214 CNOT11Q9UKZ1 510 aaKnown RBP6.91□□□□□ -1.3
ATXN3-225ENST00000554214 NPEPPSL1A6NEC2 478 aa6.9□□□□□ -1.3
ATXN3-225ENST00000554214 RASSF10A6NK89 507 aa6.9□□□□□ -1.3
ATXN3-225ENST00000554214 GOLGA6L22H0YM25 854 aa6.9□□□□□ -1.3
ATXN3-225ENST00000554214 TRAF5O00463 557 aa6.9□□□□□ -1.3
ATXN3-225ENST00000554214 JMJD7P0C870 316 aa6.9□□□□□ -1.3
ATXN3-225ENST00000554214 SDHAP31040 664 aa6.9□□□□□ -1.3
ATXN3-225ENST00000554214 CSF2RBP32927 897 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms