RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 ZNF318Q5VUA4 2279 aa11.29□□□□□ -0.6
ACTN1-210ENST00000553779 ZDBF2Q9HCK1 2354 aa11.28□□□□□ -0.6
ACTN1-210ENST00000553779 POTEB3A0JP26 581 aa11.28□□□□□ -0.6
ACTN1-210ENST00000553779 MBLAC1A4D2B0 266 aaPredicted RBP11.28□□□□□ -0.6
ACTN1-210ENST00000553779 hCG_1984214I3L0E3 225 aa11.28□□□□□ -0.6
ACTN1-210ENST00000553779 ENPP3O14638 875 aa11.28□□□□□ -0.6
ACTN1-210ENST00000553779 GRM6O15303 877 aa11.28□□□□□ -0.6
ACTN1-210ENST00000553779 DCXO43602 365 aa11.28□□□□□ -0.6
ACTN1-210ENST00000553779 NFX1Q12986 1120 aaKnown RBP11.28□□□□□ -0.6
ACTN1-210ENST00000553779 CEP55Q53EZ4 464 aa11.28□□□□□ -0.6
ACTN1-210ENST00000553779 ODR4Q5SWX8 454 aa11.28□□□□□ -0.6
ACTN1-210ENST00000553779 APOA5Q6Q788 366 aa11.28□□□□□ -0.6
ACTN1-210ENST00000553779 POTEBQ6S5H4 581 aa11.28□□□□□ -0.6
ACTN1-210ENST00000553779 CMTR2Q8IYT2 770 aaKnown RBP11.28□□□□□ -0.6
ACTN1-210ENST00000553779 ZNF713Q8N859 430 aaPredicted RBP11.28□□□□□ -0.6
ACTN1-210ENST00000553779 NEK9Q8TD19 979 aa11.28□□□□□ -0.6
ACTN1-210ENST00000553779 KHSRPQ92945 711 aaKnown RBP eCLIP11.28□□□□□ -0.6
ACTN1-210ENST00000553779 TCEANC2Q96MN5 208 aa11.28□□□□□ -0.6
ACTN1-210ENST00000553779 NEK1Q96PY6 1258 aa11.28□□□□□ -0.6
ACTN1-210ENST00000553779 PLVAPQ9BX97 442 aa11.28□□□□□ -0.6
ACTN1-210ENST00000553779 ALG13Q9NP73 1137 aaKnown RBP11.28□□□□□ -0.6
ACTN1-210ENST00000553779 CD320Q9NPF0 282 aa11.28□□□□□ -0.6
ACTN1-210ENST00000553779 RIC8AQ9NPQ8 531 aa11.28□□□□□ -0.6
ACTN1-210ENST00000553779 PRKAG3Q9UGI9 489 aa11.28□□□□□ -0.6
ACTN1-210ENST00000553779 NFASCO94856 1347 aa11.28□□□□□ -0.6
ACTN1-210ENST00000553779 KLF18A0A0U1RQI7 1052 aa11.27□□□□□ -0.61
ACTN1-210ENST00000553779 SMCO2A6NFE2 343 aa11.27□□□□□ -0.61
ACTN1-210ENST00000553779 PRR33A8MZF0 331 aa11.27□□□□□ -0.61
ACTN1-210ENST00000553779 C5orf67F2Z3F1 127 aa11.27□□□□□ -0.61
ACTN1-210ENST00000553779 MMP1P03956 469 aa11.27□□□□□ -0.61
ACTN1-210ENST00000553779 SLC26A2P50443 739 aa11.27□□□□□ -0.61
ACTN1-210ENST00000553779 AKAP17AQ02040 695 aaKnown RBP11.27□□□□□ -0.61
ACTN1-210ENST00000553779 AP3B2Q13367 1082 aa11.27□□□□□ -0.61
ACTN1-210ENST00000553779 KRT32Q14532 448 aa11.27□□□□□ -0.61
ACTN1-210ENST00000553779 PLCB4Q15147 1175 aa11.27□□□□□ -0.61
ACTN1-210ENST00000553779 TMEM266Q2M3C6 531 aa11.27□□□□□ -0.61
ACTN1-210ENST00000553779 MARCH8Q5T0T0 291 aa11.27□□□□□ -0.61
ACTN1-210ENST00000553779 MIS18BP1Q6P0N0 1132 aa11.27□□□□□ -0.61
ACTN1-210ENST00000553779 PDXDC2PQ6P474 469 aa11.27□□□□□ -0.61
ACTN1-210ENST00000553779 TRMT1LQ7Z2T5 733 aaKnown RBP11.27□□□□□ -0.61
ACTN1-210ENST00000553779 SGMS1Q86VZ5 419 aa11.27□□□□□ -0.61
ACTN1-210ENST00000553779 ADHFE1Q8IWW8 467 aa11.27□□□□□ -0.61
ACTN1-210ENST00000553779 MICAL1Q8TDZ2 1067 aa11.27□□□□□ -0.61
ACTN1-210ENST00000553779 CCDC12Q8WUD4 166 aaPredicted RBP11.27□□□□□ -0.61
ACTN1-210ENST00000553779 SCLT1Q96NL6 688 aa11.27□□□□□ -0.61
ACTN1-210ENST00000553779 PPP1R16BQ96T49 567 aa11.27□□□□□ -0.61
ACTN1-210ENST00000553779 CELF4Q9BZC1 486 aaKnown RBP11.27□□□□□ -0.61
ACTN1-210ENST00000553779 AAASQ9NRG9 546 aa11.27□□□□□ -0.61
ACTN1-210ENST00000553779 CD207Q9UJ71 328 aa11.27□□□□□ -0.61
ACTN1-210ENST00000553779 PADI3Q9ULW8 664 aa11.27□□□□□ -0.61
ACTN1-210ENST00000553779 PCDHB7Q9Y5E2 793 aa11.27□□□□□ -0.61
ACTN1-210ENST00000553779 PCDHB12Q9Y5F1 795 aa11.27□□□□□ -0.61
ACTN1-210ENST00000553779 PCDHA2Q9Y5H9 948 aa11.27□□□□□ -0.61
ACTN1-210ENST00000553779 MRPL42Q9Y6G3 142 aaKnown RBP11.27□□□□□ -0.61
ACTN1-210ENST00000553779 MYO10Q9HD67 2058 aa11.26□□□□□ -0.61
ACTN1-210ENST00000553779 STXBP3O00186 592 aa11.26□□□□□ -0.61
ACTN1-210ENST00000553779 PPFIA3O75145 1194 aa11.26□□□□□ -0.61
ACTN1-210ENST00000553779 RPS6KA5O75582 802 aa11.26□□□□□ -0.61
ACTN1-210ENST00000553779 DGKIO75912 1065 aa11.26□□□□□ -0.61
ACTN1-210ENST00000553779 ZP2Q05996 745 aa11.26□□□□□ -0.61
ACTN1-210ENST00000553779 HYAL1Q12794 435 aa11.26□□□□□ -0.61
ACTN1-210ENST00000553779 SMAD4Q13485 552 aaKnown RBP11.26□□□□□ -0.61
ACTN1-210ENST00000553779 JAKMIP3Q5VZ66 844 aa11.26□□□□□ -0.61
ACTN1-210ENST00000553779 MTHFD1LQ6UB35 978 aa11.26□□□□□ -0.61
ACTN1-210ENST00000553779 PLPPR4Q7Z2D5 763 aa11.26□□□□□ -0.61
ACTN1-210ENST00000553779 PLA2G4DQ86XP0 818 aa11.26□□□□□ -0.61
ACTN1-210ENST00000553779 NME8Q8N427 588 aa11.26□□□□□ -0.61
ACTN1-210ENST00000553779 METTL13Q8N6R0 699 aa11.26□□□□□ -0.61
ACTN1-210ENST00000553779 CLP1Q92989 425 aaKnown RBP11.26□□□□□ -0.61
ACTN1-210ENST00000553779 AGO3Q9H9G7 860 aaKnown RBP11.26□□□□□ -0.61
ACTN1-210ENST00000553779 AGO4Q9HCK5 861 aaKnown RBP11.26□□□□□ -0.61
ACTN1-210ENST00000553779 ZNF302Q9NR11 478 aa11.26□□□□□ -0.61
ACTN1-210ENST00000553779 TMEM260Q9NX78 707 aa11.26□□□□□ -0.61
ACTN1-210ENST00000553779 SAMM50Q9Y512 469 aa11.26□□□□□ -0.61
ACTN1-210ENST00000553779 SQORQ9Y6N5 450 aa11.26□□□□□ -0.61
ACTN1-210ENST00000553779 V9GY48 417 aaPredicted RBP11.26□□□□□ -0.61
ACTN1-210ENST00000553779 IGSF9BQ9UPX0 1349 aa11.26□□□□□ -0.61
ACTN1-210ENST00000553779 WDFY4Q6ZS81 3184 aa11.26□□□□□ -0.61
ACTN1-210ENST00000553779 TECTAO75443 2155 aa11.26□□□□□ -0.61
ACTN1-210ENST00000553779 CCDC196A0A1B0GTZ2 297 aa11.25□□□□□ -0.61
ACTN1-210ENST00000553779 SMIM35A0A1B0GVV1 85 aa11.25□□□□□ -0.61
ACTN1-210ENST00000553779 TBKBP1A7MCY6 615 aa11.25□□□□□ -0.61
ACTN1-210ENST00000553779 HBP1O60381 514 aa11.25□□□□□ -0.61
ACTN1-210ENST00000553779 HMGB1P09429 215 aaKnown RBP11.25□□□□□ -0.61
ACTN1-210ENST00000553779 SRGAP2BP0DMP2 458 aa11.25□□□□□ -0.61
ACTN1-210ENST00000553779 ARP10275 920 aa11.25□□□□□ -0.61
ACTN1-210ENST00000553779 KLRC1P26715 233 aa11.25□□□□□ -0.61
ACTN1-210ENST00000553779 SREBF1P36956 1147 aa11.25□□□□□ -0.61
ACTN1-210ENST00000553779 NRIP1P48552 1158 aa11.25□□□□□ -0.61
ACTN1-210ENST00000553779 METAP2P50579 478 aaKnown RBP eCLIP11.25□□□□□ -0.61
ACTN1-210ENST00000553779 SETQ01105 290 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-210ENST00000553779 ITGB3BPQ13352 177 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-210ENST00000553779 NECTIN1Q15223 517 aa11.25□□□□□ -0.61
ACTN1-210ENST00000553779 NAALADL2Q58DX5 795 aa11.25□□□□□ -0.61
ACTN1-210ENST00000553779 DHX32Q7L7V1 743 aaKnown RBP11.25□□□□□ -0.61
ACTN1-210ENST00000553779 RBM23Q86U06 439 aaKnown RBP11.25□□□□□ -0.61
ACTN1-210ENST00000553779 TEX2Q8IWB9 1127 aa11.25□□□□□ -0.61
ACTN1-210ENST00000553779 THNSL1Q8IYQ7 743 aa11.25□□□□□ -0.61
ACTN1-210ENST00000553779 KLHL23Q8NBE8 558 aa11.25□□□□□ -0.61
ACTN1-210ENST00000553779 CYP2W1Q8TAV3 490 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms