RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 CISD2Q8N5K1 135 aaKnown RBP4.87□□□□□ -1.63
VRK1-202ENST00000553683 WNK4Q96J92 1243 aa4.87□□□□□ -1.63
VRK1-202ENST00000553683 KATNBL1Q9H079 304 aa4.87□□□□□ -1.63
VRK1-202ENST00000553683 MSL2Q9HCI7 577 aa4.87□□□□□ -1.63
VRK1-202ENST00000553683 USP35Q9P2H5 1018 aa4.87□□□□□ -1.63
VRK1-202ENST00000553683 RBPJLQ9UBG7 517 aa4.87□□□□□ -1.63
VRK1-202ENST00000553683 MRPL42Q9Y6G3 142 aaKnown RBP4.87□□□□□ -1.63
VRK1-202ENST00000553683 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.86□□□□□ -1.63
VRK1-202ENST00000553683 PRAMEF25A6NGN4 478 aa4.86□□□□□ -1.63
VRK1-202ENST00000553683 GOLGA6L22H0YM25 854 aa4.86□□□□□ -1.63
VRK1-202ENST00000553683 M0R2C6 588 aa4.86□□□□□ -1.63
VRK1-202ENST00000553683 TRAF5O00463 557 aa4.86□□□□□ -1.63
VRK1-202ENST00000553683 SCDO00767 359 aa4.86□□□□□ -1.63
VRK1-202ENST00000553683 GLRX3O76003 335 aaKnown RBP4.86□□□□□ -1.63
VRK1-202ENST00000553683 SYN1P17600 705 aa4.86□□□□□ -1.63
VRK1-202ENST00000553683 SDSP20132 328 aa4.86□□□□□ -1.63
VRK1-202ENST00000553683 POLD1P28340 1107 aa4.86□□□□□ -1.63
VRK1-202ENST00000553683 RANGAP1P46060 587 aaPredicted RBP4.86□□□□□ -1.63
VRK1-202ENST00000553683 SEC23AQ15436 765 aa4.86□□□□□ -1.63
VRK1-202ENST00000553683 CFAP100Q494V2 611 aa4.86□□□□□ -1.63
VRK1-202ENST00000553683 UBXN11Q5T124 520 aa4.86□□□□□ -1.63
VRK1-202ENST00000553683 CDCA2Q69YH5 1023 aaPredicted RBP4.86□□□□□ -1.63
VRK1-202ENST00000553683 PPM1KQ8N3J5 372 aa4.86□□□□□ -1.63
VRK1-202ENST00000553683 CALML6Q8TD86 181 aa4.86□□□□□ -1.63
VRK1-202ENST00000553683 ASB15Q8WXK1 588 aa4.86□□□□□ -1.63
VRK1-202ENST00000553683 DDX1Q92499 740 aaKnown RBP4.86□□□□□ -1.63
VRK1-202ENST00000553683 SCYL1Q96KG9 808 aa4.86□□□□□ -1.63
VRK1-202ENST00000553683 ZSWIM3Q96MP5 696 aa4.86□□□□□ -1.63
VRK1-202ENST00000553683 CD2APQ9Y5K6 639 aa4.86□□□□□ -1.63
VRK1-202ENST00000553683 FOXD2O60548 495 aaPredicted RBP4.85□□□□□ -1.63
VRK1-202ENST00000553683 MPIG6BO95866 241 aa4.85□□□□□ -1.63
VRK1-202ENST00000553683 PLATP00750 562 aa4.85□□□□□ -1.63
VRK1-202ENST00000553683 JMJD7P0C870 316 aa4.85□□□□□ -1.63
VRK1-202ENST00000553683 HSD3B2P26439 372 aa4.85□□□□□ -1.63
VRK1-202ENST00000553683 ECE1P42892 770 aa4.85□□□□□ -1.63
VRK1-202ENST00000553683 DALRD3Q5D0E6 543 aaKnown RBP4.85□□□□□ -1.63
VRK1-202ENST00000553683 LRRTM3Q86VH5 581 aa4.85□□□□□ -1.63
VRK1-202ENST00000553683 NIM1KQ8IY84 436 aa4.85□□□□□ -1.63
VRK1-202ENST00000553683 ZDHHC14Q8IZN3 488 aa4.85□□□□□ -1.63
VRK1-202ENST00000553683 STPG3Q8N7X2 389 aa4.85□□□□□ -1.63
VRK1-202ENST00000553683 MFSD3Q96ES6 412 aa4.85□□□□□ -1.63
VRK1-202ENST00000553683 GBP4Q96PP9 640 aa4.85□□□□□ -1.63
VRK1-202ENST00000553683 FOXB1Q99853 325 aa4.85□□□□□ -1.63
VRK1-202ENST00000553683 SLC39A2Q9NP94 309 aa4.85□□□□□ -1.63
VRK1-202ENST00000553683 TMA7Q9Y2S6 64 aaKnown RBP4.85□□□□□ -1.63
VRK1-202ENST00000553683 PTPDC1A2A3K4 754 aa4.84□□□□□ -1.63
VRK1-202ENST00000553683 H7C1D1 291 aa4.84□□□□□ -1.63
VRK1-202ENST00000553683 F2P00734 622 aa4.84□□□□□ -1.63
VRK1-202ENST00000553683 MMEP08473 750 aa4.84□□□□□ -1.63
VRK1-202ENST00000553683 ETV4P43268 484 aa4.84□□□□□ -1.63
VRK1-202ENST00000553683 GLRBP48167 497 aa4.84□□□□□ -1.63
VRK1-202ENST00000553683 EPHB4P54760 987 aa4.84□□□□□ -1.63
VRK1-202ENST00000553683 ADCY1Q08828 1119 aa4.84□□□□□ -1.63
VRK1-202ENST00000553683 TOP3AQ13472 1001 aaPredicted RBP4.84□□□□□ -1.63
VRK1-202ENST00000553683 ZNF460Q14592 562 aa4.84□□□□□ -1.63
VRK1-202ENST00000553683 EPHA7Q15375 998 aa4.84□□□□□ -1.63
VRK1-202ENST00000553683 ZNF174Q15697 407 aa4.84□□□□□ -1.63
VRK1-202ENST00000553683 TKFCQ3LXA3 575 aa4.84□□□□□ -1.63
VRK1-202ENST00000553683 TM4SF20Q53R12 229 aa4.84□□□□□ -1.63
VRK1-202ENST00000553683 CATSPEREQ5SY80 951 aa4.84□□□□□ -1.63
VRK1-202ENST00000553683 LCE1DQ5T752 114 aa4.84□□□□□ -1.63
VRK1-202ENST00000553683 PIK3R6Q5UE93 754 aa4.84□□□□□ -1.63
VRK1-202ENST00000553683 CPZQ66K79 652 aa4.84□□□□□ -1.63
VRK1-202ENST00000553683 ZZZ3Q8IYH5 903 aa4.84□□□□□ -1.63
VRK1-202ENST00000553683 NUDT10Q8NFP7 164 aa4.84□□□□□ -1.63
VRK1-202ENST00000553683 WDR48Q8TAF3 677 aa4.84□□□□□ -1.63
VRK1-202ENST00000553683 NUDT11Q96G61 164 aa4.84□□□□□ -1.63
VRK1-202ENST00000553683 TACO1Q9BSH4 297 aaKnown RBP4.84□□□□□ -1.63
VRK1-202ENST00000553683 CARD11Q9BXL7 1154 aa4.84□□□□□ -1.63
VRK1-202ENST00000553683 OR10A5Q9H207 317 aa4.84□□□□□ -1.63
VRK1-202ENST00000553683 SEC61A2Q9H9S3 476 aa4.84□□□□□ -1.63
VRK1-202ENST00000553683 LAMTOR5O43504 91 aa4.83□□□□□ -1.64
VRK1-202ENST00000553683 B4GALT3O60512 393 aa4.83□□□□□ -1.64
VRK1-202ENST00000553683 ITGB3P05106 788 aa4.83□□□□□ -1.64
VRK1-202ENST00000553683 CNR2P34972 360 aa4.83□□□□□ -1.64
VRK1-202ENST00000553683 PPP2CBP62714 309 aa4.83□□□□□ -1.64
VRK1-202ENST00000553683 PPP2CAP67775 309 aa4.83□□□□□ -1.64
VRK1-202ENST00000553683 EIF4HQ15056 248 aaKnown RBP4.83□□□□□ -1.64
VRK1-202ENST00000553683 ZNF827Q17R98 1081 aa4.83□□□□□ -1.64
VRK1-202ENST00000553683 LCE4AQ5TA78 99 aa4.83□□□□□ -1.64
VRK1-202ENST00000553683 KANK2Q63ZY3 851 aa4.83□□□□□ -1.64
VRK1-202ENST00000553683 KBTBD2Q8IY47 623 aa4.83□□□□□ -1.64
VRK1-202ENST00000553683 IFNL2Q8IZJ0 200 aa4.83□□□□□ -1.64
VRK1-202ENST00000553683 TTC9BQ8N6N2 239 aa4.83□□□□□ -1.64
VRK1-202ENST00000553683 FOXRED1Q96CU9 486 aaPredicted RBP4.83□□□□□ -1.64
VRK1-202ENST00000553683 RBM15Q96T37 977 aaKnown RBP eCLIP4.83□□□□□ -1.64
VRK1-202ENST00000553683 AMNQ9BXJ7 453 aa4.83□□□□□ -1.64
VRK1-202ENST00000553683 ZDHHC5Q9C0B5 715 aa4.83□□□□□ -1.64
VRK1-202ENST00000553683 PCIF1Q9H4Z3 704 aa4.83□□□□□ -1.64
VRK1-202ENST00000553683 INVSQ9Y283 1065 aa4.83□□□□□ -1.64
VRK1-202ENST00000553683 ZKSCAN5Q9Y2L8 839 aa4.83□□□□□ -1.64
VRK1-202ENST00000553683 SPO11Q9Y5K1 396 aa4.83□□□□□ -1.64
VRK1-202ENST00000553683 SLC4A7Q9Y6M7 1214 aa4.83□□□□□ -1.64
VRK1-202ENST00000553683 DUSP10Q9Y6W6 482 aa4.83□□□□□ -1.64
VRK1-202ENST00000553683 FAM83GA6ND36 823 aa4.82□□□□□ -1.64
VRK1-202ENST00000553683 RASSF10A6NK89 507 aa4.82□□□□□ -1.64
VRK1-202ENST00000553683 KCNK3O14649 394 aa4.82□□□□□ -1.64
VRK1-202ENST00000553683 MAFGO15525 162 aa4.82□□□□□ -1.64
VRK1-202ENST00000553683 PRICKLE3O43900 615 aaPredicted RBP4.82□□□□□ -1.64
VRK1-202ENST00000553683 CELA3BP08861 270 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms