RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 DBF4Q9UBU7 674 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-220ENST00000553491 LAMB2P55268 1798 aa5.93□□□□□ -1.46
ATXN3-220ENST00000553491 SLX4Q8IY92 1834 aa5.92□□□□□ -1.46
ATXN3-220ENST00000553491 ARFGEF1Q9Y6D6 1849 aa5.92□□□□□ -1.46
ATXN3-220ENST00000553491 BRCA1P38398 1863 aaKnown RBP5.92□□□□□ -1.46
ATXN3-220ENST00000553491 POLRMTO00411 1230 aaKnown RBP5.92□□□□□ -1.46
ATXN3-220ENST00000553491 ZNF205O95201 554 aa5.92□□□□□ -1.46
ATXN3-220ENST00000553491 ZNF853P0CG23 659 aa5.92□□□□□ -1.46
ATXN3-220ENST00000553491 RPL10P27635 214 aaKnown RBP5.92□□□□□ -1.46
ATXN3-220ENST00000553491 BMP8BP34820 402 aa5.92□□□□□ -1.46
ATXN3-220ENST00000553491 ZNF143P52747 638 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-220ENST00000553491 JAG1P78504 1218 aa5.92□□□□□ -1.46
ATXN3-220ENST00000553491 CHRNEQ04844 493 aa5.92□□□□□ -1.46
ATXN3-220ENST00000553491 SSRP1Q08945 709 aaKnown RBP5.92□□□□□ -1.46
ATXN3-220ENST00000553491 DUSP4Q13115 394 aa5.92□□□□□ -1.46
ATXN3-220ENST00000553491 HEATR6Q6AI08 1181 aaKnown RBP5.92□□□□□ -1.46
ATXN3-220ENST00000553491 MPZL3Q6UWV2 235 aa5.92□□□□□ -1.46
ATXN3-220ENST00000553491 SPPL2CQ8IUH8 684 aa5.92□□□□□ -1.46
ATXN3-220ENST00000553491 JMYQ8N9B5 988 aa5.92□□□□□ -1.46
ATXN3-220ENST00000553491 CNBD1Q8NA66 436 aa5.92□□□□□ -1.46
ATXN3-220ENST00000553491 BHLHE22Q8NFJ8 381 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-220ENST00000553491 MAP6Q96JE9 813 aa5.92□□□□□ -1.46
ATXN3-220ENST00000553491 HHIPL1Q96JK4 782 aa5.92□□□□□ -1.46
ATXN3-220ENST00000553491 FGD4Q96M96 766 aa5.92□□□□□ -1.46
ATXN3-220ENST00000553491 CHMP4AQ9BY43 222 aa5.92□□□□□ -1.46
ATXN3-220ENST00000553491 EPN3Q9H201 632 aa5.92□□□□□ -1.46
ATXN3-220ENST00000553491 APEX2Q9UBZ4 518 aa5.92□□□□□ -1.46
ATXN3-220ENST00000553491 MAP3K15Q6ZN16 1313 aa5.92□□□□□ -1.46
ATXN3-220ENST00000553491 KDM2BQ8NHM5 1336 aa5.92□□□□□ -1.46
ATXN3-220ENST00000553491 SCN7AQ01118 1682 aa5.91□□□□□ -1.46
ATXN3-220ENST00000553491 ERVV-1B6SEH8 477 aa5.91□□□□□ -1.46
ATXN3-220ENST00000553491 DDX58O95786 925 aaKnown RBP5.91□□□□□ -1.46
ATXN3-220ENST00000553491 VAV1P15498 845 aa5.91□□□□□ -1.46
ATXN3-220ENST00000553491 CD247P20963 164 aa5.91□□□□□ -1.46
ATXN3-220ENST00000553491 YY1P25490 414 aa5.91□□□□□ -1.46
ATXN3-220ENST00000553491 PDE6BP35913 854 aa5.91□□□□□ -1.46
ATXN3-220ENST00000553491 KIR2DL1P43626 348 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-220ENST00000553491 KIR2DL2P43627 348 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-220ENST00000553491 ZNF445P59923 1031 aa5.91□□□□□ -1.46
ATXN3-220ENST00000553491 TGFB2P61812 414 aa5.91□□□□□ -1.46
ATXN3-220ENST00000553491 SNX17Q15036 470 aa5.91□□□□□ -1.46
ATXN3-220ENST00000553491 TCEAL1Q15170 157 aa5.91□□□□□ -1.46
ATXN3-220ENST00000553491 SV2CQ496J9 727 aa5.91□□□□□ -1.46
ATXN3-220ENST00000553491 C2orf27AQ580R0 203 aa5.91□□□□□ -1.46
ATXN3-220ENST00000553491 DALRD3Q5D0E6 543 aaKnown RBP5.91□□□□□ -1.46
ATXN3-220ENST00000553491 EGFLAMQ63HQ2 1017 aa5.91□□□□□ -1.46
ATXN3-220ENST00000553491 CLEC4GQ6UXB4 293 aa5.91□□□□□ -1.46
ATXN3-220ENST00000553491 PPP1R42Q7Z4L9 355 aa5.91□□□□□ -1.46
ATXN3-220ENST00000553491 NLRX1Q86UT6 975 aa5.91□□□□□ -1.46
ATXN3-220ENST00000553491 APBA2Q99767 749 aa5.91□□□□□ -1.46
ATXN3-220ENST00000553491 MYD88Q99836 296 aa5.91□□□□□ -1.46
ATXN3-220ENST00000553491 SPATA9Q9BWV2 254 aa5.91□□□□□ -1.46
ATXN3-220ENST00000553491 NYXQ9GZU5 481 aa5.91□□□□□ -1.46
ATXN3-220ENST00000553491 NSUN3Q9H649 340 aaKnown RBP5.91□□□□□ -1.46
ATXN3-220ENST00000553491 CWC22Q9HCG8 908 aaKnown RBP5.91□□□□□ -1.46
ATXN3-220ENST00000553491 GP6Q9HCN6 339 aa5.91□□□□□ -1.46
ATXN3-220ENST00000553491 TRMT112Q9UI30 125 aaKnown RBP5.91□□□□□ -1.46
ATXN3-220ENST00000553491 FBXL21Q9UKT6 434 aa5.91□□□□□ -1.46
ATXN3-220ENST00000553491 YBX2Q9Y2T7 364 aaKnown RBP5.91□□□□□ -1.46
ATXN3-220ENST00000553491 DICER1Q9UPY3 1922 aaKnown RBP5.9□□□□□ -1.46
ATXN3-220ENST00000553491 ESYT3A0FGR9 886 aa5.9□□□□□ -1.46
ATXN3-220ENST00000553491 FADS2P1A8MWK0 482 aa5.9□□□□□ -1.46
ATXN3-220ENST00000553491 MEIS1O00470 390 aa5.9□□□□□ -1.46
ATXN3-220ENST00000553491 ENPP3O14638 875 aa5.9□□□□□ -1.46
ATXN3-220ENST00000553491 NRDCO43847 1150 aa5.9□□□□□ -1.46
ATXN3-220ENST00000553491 ADCY3O60266 1144 aa5.9□□□□□ -1.46
ATXN3-220ENST00000553491 FKTNO75072 461 aa5.9□□□□□ -1.46
ATXN3-220ENST00000553491 VAMP4O75379 141 aa5.9□□□□□ -1.46
ATXN3-220ENST00000553491 USP2O75604 605 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-220ENST00000553491 TCIRG1Q13488 830 aa5.9□□□□□ -1.46
ATXN3-220ENST00000553491 SQSTM1Q13501 440 aa5.9□□□□□ -1.46
ATXN3-220ENST00000553491 HSP90AB3PQ58FF7 597 aa5.9□□□□□ -1.46
ATXN3-220ENST00000553491 RTP2Q5QGT7 225 aa5.9□□□□□ -1.46
ATXN3-220ENST00000553491 SUSD4Q5VX71 490 aa5.9□□□□□ -1.46
ATXN3-220ENST00000553491 PRR5LQ6MZQ0 368 aa5.9□□□□□ -1.46
ATXN3-220ENST00000553491 CRTC3Q6UUV7 619 aa5.9□□□□□ -1.46
ATXN3-220ENST00000553491 ZNF662Q6ZS27 426 aa5.9□□□□□ -1.46
ATXN3-220ENST00000553491 TMEM52Q8NDY8 209 aa5.9□□□□□ -1.46
ATXN3-220ENST00000553491 PLBD2Q8NHP8 589 aa5.9□□□□□ -1.46
ATXN3-220ENST00000553491 THAP3Q8WTV1 239 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-220ENST00000553491 RPGRQ92834 1020 aaKnown RBP5.9□□□□□ -1.46
ATXN3-220ENST00000553491 YTHDC1Q96MU7 727 aaKnown RBP5.9□□□□□ -1.46
ATXN3-220ENST00000553491 DIRC2Q96SL1 478 aa5.9□□□□□ -1.46
ATXN3-220ENST00000553491 UTP14AQ9BVJ6 771 aaKnown RBP5.9□□□□□ -1.46
ATXN3-220ENST00000553491 LGR4Q9BXB1 951 aa5.9□□□□□ -1.46
ATXN3-220ENST00000553491 ERVK13-1Q9NX77 482 aa5.9□□□□□ -1.46
ATXN3-220ENST00000553491 MAP3K2Q9Y2U5 619 aa5.9□□□□□ -1.46
ATXN3-220ENST00000553491 IL16Q14005 1332 aa5.9□□□□□ -1.47
ATXN3-220ENST00000553491 FANCIQ9NVI1 1328 aa5.9□□□□□ -1.47
ATXN3-220ENST00000553491 CARMIL3Q8ND23 1372 aa5.9□□□□□ -1.47
ATXN3-220ENST00000553491 DLEC1Q9Y238 1755 aa5.9□□□□□ -1.47
ATXN3-220ENST00000553491 NRXN2Q9P2S2 1712 aa5.89□□□□□ -1.47
ATXN3-220ENST00000553491 A0A1W2PQU0 124 aa5.89□□□□□ -1.47
ATXN3-220ENST00000553491 ITGAVP06756 1048 aa5.89□□□□□ -1.47
ATXN3-220ENST00000553491 HOXB7P09629 217 aa5.89□□□□□ -1.47
ATXN3-220ENST00000553491 FAM153BP0C7A2 387 aa5.89□□□□□ -1.47
ATXN3-220ENST00000553491 NAT2P11245 290 aa5.89□□□□□ -1.47
ATXN3-220ENST00000553491 GALK1P51570 392 aa5.89□□□□□ -1.47
ATXN3-220ENST00000553491 NEXNQ0ZGT2 675 aa5.89□□□□□ -1.47
ATXN3-220ENST00000553491 SLC4A10Q6U841 1118 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms