RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 KLRG2A4D1S0 409 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-208ENST00000553278 WASH4PA8MWX3 477 aa7.16□□□□□ -1.26
SCFD1-208ENST00000553278 C22orf46C9J442 243 aa7.16□□□□□ -1.26
SCFD1-208ENST00000553278 FAM227AF5H4B4 570 aa7.16□□□□□ -1.26
SCFD1-208ENST00000553278 H3BS24 57 aa7.16□□□□□ -1.26
SCFD1-208ENST00000553278 PQBP1O60828 265 aaKnown RBP7.16□□□□□ -1.26
SCFD1-208ENST00000553278 CENPBP07199 599 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-208ENST00000553278 OSMP13725 252 aa7.16□□□□□ -1.26
SCFD1-208ENST00000553278 FNTBP49356 437 aa7.16□□□□□ -1.26
SCFD1-208ENST00000553278 ALDH5A1P51649 535 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-208ENST00000553278 SLC9A5Q14940 896 aa7.16□□□□□ -1.26
SCFD1-208ENST00000553278 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.16□□□□□ -1.26
SCFD1-208ENST00000553278 ZNF385CQ66K41 422 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-208ENST00000553278 XRRA1Q6P2D8 792 aa7.16□□□□□ -1.26
SCFD1-208ENST00000553278 ESPNLQ6ZVH7 1005 aa7.16□□□□□ -1.26
SCFD1-208ENST00000553278 TMPRSS7Q7RTY8 843 aa7.16□□□□□ -1.26
SCFD1-208ENST00000553278 OVCH2Q7RTZ1 564 aa7.16□□□□□ -1.26
SCFD1-208ENST00000553278 WAPLQ7Z5K2 1190 aa7.16□□□□□ -1.26
SCFD1-208ENST00000553278 CXorf67Q86X51 503 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-208ENST00000553278 FAM156AQ8NDB6 213 aa7.16□□□□□ -1.26
SCFD1-208ENST00000553278 SH3RF2Q8TEC5 729 aa7.16□□□□□ -1.26
SCFD1-208ENST00000553278 UBE2FQ969M7 185 aa7.16□□□□□ -1.26
SCFD1-208ENST00000553278 MVB12AQ96EY5 273 aa7.16□□□□□ -1.26
SCFD1-208ENST00000553278 RAX2Q96IS3 184 aa7.16□□□□□ -1.26
SCFD1-208ENST00000553278 FCRL2Q96LA5 508 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-208ENST00000553278 SCLT1Q96NL6 688 aa7.16□□□□□ -1.26
SCFD1-208ENST00000553278 TMEM60Q9H2L4 133 aa7.16□□□□□ -1.26
SCFD1-208ENST00000553278 SLC6A20Q9NP91 592 aa7.16□□□□□ -1.26
SCFD1-208ENST00000553278 ERVK13-1Q9NX77 482 aa7.16□□□□□ -1.26
SCFD1-208ENST00000553278 GULP1Q9UBP9 304 aa7.16□□□□□ -1.26
SCFD1-208ENST00000553278 F5H423 210 aaPredicted RBP7.15□□□□□ -1.26
SCFD1-208ENST00000553278 H3BML4 177 aa7.15□□□□□ -1.26
SCFD1-208ENST00000553278 TUSC2O75896 110 aa7.15□□□□□ -1.26
SCFD1-208ENST00000553278 FUCA1P04066 466 aa7.15□□□□□ -1.26
SCFD1-208ENST00000553278 SLC5A1P13866 664 aa7.15□□□□□ -1.26
SCFD1-208ENST00000553278 PDCP20941 246 aa7.15□□□□□ -1.26
SCFD1-208ENST00000553278 GJA4P35212 333 aa7.15□□□□□ -1.26
SCFD1-208ENST00000553278 ADMP35318 185 aa7.15□□□□□ -1.26
SCFD1-208ENST00000553278 CLCN7P51798 805 aa7.15□□□□□ -1.26
SCFD1-208ENST00000553278 SLC16A1P53985 500 aa7.15□□□□□ -1.26
SCFD1-208ENST00000553278 MRPS9P82933 396 aaKnown RBP7.15□□□□□ -1.26
SCFD1-208ENST00000553278 KIAA0753Q2KHM9 967 aa7.15□□□□□ -1.26
SCFD1-208ENST00000553278 CT83Q5H943 113 aa7.15□□□□□ -1.26
SCFD1-208ENST00000553278 MROH9Q5TGP6 573 aa7.15□□□□□ -1.26
SCFD1-208ENST00000553278 DUSP27Q5VZP5 1158 aa7.15□□□□□ -1.26
SCFD1-208ENST00000553278 DARS2Q6PI48 645 aaKnown RBP7.15□□□□□ -1.26
SCFD1-208ENST00000553278 USP45Q70EL2 814 aa7.15□□□□□ -1.26
SCFD1-208ENST00000553278 ZNF354CQ86Y25 554 aa7.15□□□□□ -1.26
SCFD1-208ENST00000553278 DENND1CQ8IV53 801 aa7.15□□□□□ -1.26
SCFD1-208ENST00000553278 THEMISQ8N1K5 641 aaPredicted RBP7.15□□□□□ -1.26
SCFD1-208ENST00000553278 UHMK1Q8TAS1 419 aaKnown RBP7.15□□□□□ -1.26
SCFD1-208ENST00000553278 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.15□□□□□ -1.26
SCFD1-208ENST00000553278 MEGF10Q96KG7 1140 aa7.15□□□□□ -1.26
SCFD1-208ENST00000553278 C16orf92Q96LL3 132 aa7.15□□□□□ -1.26
SCFD1-208ENST00000553278 HSPA12BQ96MM6 686 aa7.15□□□□□ -1.26
SCFD1-208ENST00000553278 ANO3Q9BYT9 981 aa7.15□□□□□ -1.26
SCFD1-208ENST00000553278 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.15□□□□□ -1.26
SCFD1-208ENST00000553278 EDARQ9UNE0 448 aa7.15□□□□□ -1.26
SCFD1-208ENST00000553278 MAFKO60675 156 aa7.14□□□□□ -1.27
SCFD1-208ENST00000553278 TMEM253P0C7T8 217 aa7.14□□□□□ -1.27
SCFD1-208ENST00000553278 MANFP55145 182 aaKnown RBP7.14□□□□□ -1.27
SCFD1-208ENST00000553278 TEKQ02763 1124 aa7.14□□□□□ -1.27
SCFD1-208ENST00000553278 KCNMA1Q12791 1236 aa7.14□□□□□ -1.27
SCFD1-208ENST00000553278 IFIT5Q13325 482 aaKnown RBP7.14□□□□□ -1.27
SCFD1-208ENST00000553278 MOGSQ13724 837 aa7.14□□□□□ -1.27
SCFD1-208ENST00000553278 ADGRE1Q14246 886 aa7.14□□□□□ -1.27
SCFD1-208ENST00000553278 MBTPS1Q14703 1052 aa7.14□□□□□ -1.27
SCFD1-208ENST00000553278 NKPD1Q17RQ9 610 aa7.14□□□□□ -1.27
SCFD1-208ENST00000553278 ZPBP2Q6X784 338 aa7.14□□□□□ -1.27
SCFD1-208ENST00000553278 ZNF765Q7L2R6 523 aa7.14□□□□□ -1.27
SCFD1-208ENST00000553278 KCNK18Q7Z418 384 aa7.14□□□□□ -1.27
SCFD1-208ENST00000553278 MYLK4Q86YV6 388 aaPredicted RBP7.14□□□□□ -1.27
SCFD1-208ENST00000553278 RIOX2Q8IUF8 465 aa7.14□□□□□ -1.27
SCFD1-208ENST00000553278 CREG2Q8IUH2 290 aa7.14□□□□□ -1.27
SCFD1-208ENST00000553278 SIRT2Q8IXJ6 389 aa7.14□□□□□ -1.27
SCFD1-208ENST00000553278 C7orf31Q8N865 590 aa7.14□□□□□ -1.27
SCFD1-208ENST00000553278 TMEM52Q8NDY8 209 aa7.14□□□□□ -1.27
SCFD1-208ENST00000553278 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.14□□□□□ -1.27
SCFD1-208ENST00000553278 PPP1R35Q8TAP8 253 aa7.14□□□□□ -1.27
SCFD1-208ENST00000553278 EAF2Q96CJ1 260 aaPredicted RBP7.14□□□□□ -1.27
SCFD1-208ENST00000553278 PGBD4Q96DM1 585 aa7.14□□□□□ -1.27
SCFD1-208ENST00000553278 CCDC138Q96M89 665 aa7.14□□□□□ -1.27
SCFD1-208ENST00000553278 SLC2A13Q96QE2 648 aa7.14□□□□□ -1.27
SCFD1-208ENST00000553278 CD244Q9BZW8 370 aa7.14□□□□□ -1.27
SCFD1-208ENST00000553278 WNT8AQ9H1J5 351 aa7.14□□□□□ -1.27
SCFD1-208ENST00000553278 MKNK2Q9HBH9 465 aa7.14□□□□□ -1.27
SCFD1-208ENST00000553278 LUZP4Q9P127 313 aa7.14□□□□□ -1.27
SCFD1-208ENST00000553278 TUBD1Q9UJT1 453 aa7.14□□□□□ -1.27
SCFD1-208ENST00000553278 NBNO60934 754 aa7.13□□□□□ -1.27
SCFD1-208ENST00000553278 CLEC2LP0C7M8 214 aa7.13□□□□□ -1.27
SCFD1-208ENST00000553278 TYRP1P17643 537 aa7.13□□□□□ -1.27
SCFD1-208ENST00000553278 SDHAP31040 664 aa7.13□□□□□ -1.27
SCFD1-208ENST00000553278 TM4SF4P48230 202 aa7.13□□□□□ -1.27
SCFD1-208ENST00000553278 CACNB3P54284 484 aa7.13□□□□□ -1.27
SCFD1-208ENST00000553278 OXCT1P55809 520 aa7.13□□□□□ -1.27
SCFD1-208ENST00000553278 BTKQ06187 659 aa7.13□□□□□ -1.27
SCFD1-208ENST00000553278 EGR3Q06889 387 aa7.13□□□□□ -1.27
SCFD1-208ENST00000553278 SEMA5AQ13591 1074 aa7.13□□□□□ -1.27
SCFD1-208ENST00000553278 CHRNA2Q15822 529 aa7.13□□□□□ -1.27
SCFD1-208ENST00000553278 MBNL2Q5VZF2 373 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms