RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 LEMD3Q9Y2U8 911 aa16.4■□□□□ 0.22
PDE1B-207ENST00000550620 MYH14Q7Z406 1995 aaKnown RBP16.4■□□□□ 0.22
PDE1B-207ENST00000550620 E9PMD0 336 aa16.4■□□□□ 0.22
PDE1B-207ENST00000550620 TMOD1P28289 359 aa16.4■□□□□ 0.22
PDE1B-207ENST00000550620 IFFO1Q0D2I5 559 aa16.4■□□□□ 0.22
PDE1B-207ENST00000550620 PREPLQ4J6C6 727 aaPredicted RBP16.4■□□□□ 0.22
PDE1B-207ENST00000550620 LACTB2Q53H82 288 aaPredicted RBP16.4■□□□□ 0.22
PDE1B-207ENST00000550620 RAPGEF5Q92565 580 aa16.4■□□□□ 0.22
PDE1B-207ENST00000550620 SETDB2Q96T68 719 aa16.4■□□□□ 0.22
PDE1B-207ENST00000550620 RAB17Q9H0T7 212 aa16.4■□□□□ 0.22
PDE1B-207ENST00000550620 ANKIB1Q9P2G1 1089 aa16.4■□□□□ 0.22
PDE1B-207ENST00000550620 AMACRQ9UHK6 382 aa16.4■□□□□ 0.22
PDE1B-207ENST00000550620 PNMA6FA0A0J9YX94 578 aa16.39■□□□□ 0.21
PDE1B-207ENST00000550620 FRMD3A2A2Y4 597 aa16.39■□□□□ 0.21
PDE1B-207ENST00000550620 ZBTB48P10074 688 aaPredicted RBP16.39■□□□□ 0.21
PDE1B-207ENST00000550620 ACTN1P12814 892 aa16.39■□□□□ 0.21
PDE1B-207ENST00000550620 CYP11B2P19099 503 aa16.39■□□□□ 0.21
PDE1B-207ENST00000550620 CLK2P49760 499 aaKnown RBP16.39■□□□□ 0.21
PDE1B-207ENST00000550620 MRPL12P52815 198 aaKnown RBP16.39■□□□□ 0.21
PDE1B-207ENST00000550620 MAGOHP61326 146 aaKnown RBP16.39■□□□□ 0.21
PDE1B-207ENST00000550620 PPP2R5EQ16537 467 aa16.39■□□□□ 0.21
PDE1B-207ENST00000550620 CPLX4Q7Z7G2 160 aa16.39■□□□□ 0.21
PDE1B-207ENST00000550620 HOOK3Q86VS8 718 aa16.39■□□□□ 0.21
PDE1B-207ENST00000550620 PARP9Q8IXQ6 854 aa16.39■□□□□ 0.21
PDE1B-207ENST00000550620 TATDN2Q93075 761 aa16.39■□□□□ 0.21
PDE1B-207ENST00000550620 MAGOHBQ96A72 148 aaKnown RBP16.39■□□□□ 0.21
PDE1B-207ENST00000550620 OSBPL7Q9BZF2 842 aa16.39■□□□□ 0.21
PDE1B-207ENST00000550620 TRAF3IP3Q9Y228 551 aa16.39■□□□□ 0.21
PDE1B-207ENST00000550620 STXBP5LQ9Y2K9 1186 aa16.39■□□□□ 0.21
PDE1B-207ENST00000550620 DIS3Q9Y2L1 958 aaKnown RBP16.39■□□□□ 0.21
PDE1B-207ENST00000550620 WNK3Q9BYP7 1800 aa16.39■□□□□ 0.21
PDE1B-207ENST00000550620 F8VZ95 297 aa16.38■□□□□ 0.21
PDE1B-207ENST00000550620 CALUO43852 315 aaPredicted RBP16.38■□□□□ 0.21
PDE1B-207ENST00000550620 GHRP10912 638 aa16.38■□□□□ 0.21
PDE1B-207ENST00000550620 XRCC5P13010 732 aaKnown RBP16.38■□□□□ 0.21
PDE1B-207ENST00000550620 SLC9A1P19634 815 aa16.38■□□□□ 0.21
PDE1B-207ENST00000550620 CYB5D1Q6P9G0 228 aa16.38■□□□□ 0.21
PDE1B-207ENST00000550620 MAGEC3Q8TD91 643 aa16.38■□□□□ 0.21
PDE1B-207ENST00000550620 SGSM3Q96HU1 749 aa16.38■□□□□ 0.21
PDE1B-207ENST00000550620 MXD3Q9BW11 206 aa16.38■□□□□ 0.21
PDE1B-207ENST00000550620 GOLPH3Q9H4A6 298 aa16.38■□□□□ 0.21
PDE1B-207ENST00000550620 TTC7AQ9ULT0 858 aaPredicted RBP16.38■□□□□ 0.21
PDE1B-207ENST00000550620 THRAP3Q9Y2W1 955 aaKnown RBP16.38■□□□□ 0.21
PDE1B-207ENST00000550620 TTI1O43156 1089 aa16.38■□□□□ 0.21
PDE1B-207ENST00000550620 PON1P27169 355 aa16.38■□□□□ 0.21
PDE1B-207ENST00000550620 DHX9Q08211 1270 aaKnown RBP16.38■□□□□ 0.21
PDE1B-207ENST00000550620 UBE2SQ16763 222 aa16.38■□□□□ 0.21
PDE1B-207ENST00000550620 QPCTQ16769 361 aa16.38■□□□□ 0.21
PDE1B-207ENST00000550620 TPTE2Q6XPS3 522 aa16.38■□□□□ 0.21
PDE1B-207ENST00000550620 DAAM2Q86T65 1068 aa16.38■□□□□ 0.21
PDE1B-207ENST00000550620 FUKQ8N0W3 1084 aa16.38■□□□□ 0.21
PDE1B-207ENST00000550620 CENPTQ96BT3 561 aa16.38■□□□□ 0.21
PDE1B-207ENST00000550620 KDM4CQ9H3R0 1056 aa16.38■□□□□ 0.21
PDE1B-207ENST00000550620 ZHX3Q9H4I2 956 aa16.38■□□□□ 0.21
PDE1B-207ENST00000550620 METTL14Q9HCE5 456 aaKnown RBP16.38■□□□□ 0.21
PDE1B-207ENST00000550620 CNOT8Q9UFF9 292 aaKnown RBP16.38■□□□□ 0.21
PDE1B-207ENST00000550620 AMFRQ9UKV5 643 aa16.38■□□□□ 0.21
PDE1B-207ENST00000550620 NENFQ9UMX5 172 aa16.38■□□□□ 0.21
PDE1B-207ENST00000550620 PLIN4Q96Q06 1357 aa16.38■□□□□ 0.21
PDE1B-207ENST00000550620 GPR75-ASB3A0A0A6YYF3 556 aa16.37■□□□□ 0.21
PDE1B-207ENST00000550620 C21orf2O43822 256 aa16.37■□□□□ 0.21
PDE1B-207ENST00000550620 GFPT2O94808 682 aa16.37■□□□□ 0.21
PDE1B-207ENST00000550620 SNHG28P0DPA3 235 aa16.37■□□□□ 0.21
PDE1B-207ENST00000550620 FLT3P36888 993 aa16.37■□□□□ 0.21
PDE1B-207ENST00000550620 GRIK5Q16478 980 aa16.37■□□□□ 0.21
PDE1B-207ENST00000550620 WLSQ5T9L3 541 aa16.37■□□□□ 0.21
PDE1B-207ENST00000550620 DPY19L2P1Q6NXN4 242 aa16.37■□□□□ 0.21
PDE1B-207ENST00000550620 HES6Q96HZ4 224 aa16.37■□□□□ 0.21
PDE1B-207ENST00000550620 NAP1L3Q99457 506 aaPredicted RBP16.37■□□□□ 0.21
PDE1B-207ENST00000550620 FMO2Q99518 471 aa16.37■□□□□ 0.21
PDE1B-207ENST00000550620 NPHP3-ACAD11A0A0J9YXS1 232 aa16.37■□□□□ 0.21
PDE1B-207ENST00000550620 POTEB3A0JP26 581 aa16.37■□□□□ 0.21
PDE1B-207ENST00000550620 POTECB2RU33 542 aa16.37■□□□□ 0.21
PDE1B-207ENST00000550620 FERP16591 822 aa16.37■□□□□ 0.21
PDE1B-207ENST00000550620 NF2P35240 595 aa16.37■□□□□ 0.21
PDE1B-207ENST00000550620 SCTRP47872 440 aa16.37■□□□□ 0.21
PDE1B-207ENST00000550620 CACNB1Q02641 598 aaPredicted RBP16.37■□□□□ 0.21
PDE1B-207ENST00000550620 CLUL1Q15846 466 aa16.37■□□□□ 0.21
PDE1B-207ENST00000550620 KNOP1Q1ED39 458 aaKnown RBP16.37■□□□□ 0.21
PDE1B-207ENST00000550620 POTEBQ6S5H4 581 aa16.37■□□□□ 0.21
PDE1B-207ENST00000550620 NT5DC3Q86UY8 548 aa16.37■□□□□ 0.21
PDE1B-207ENST00000550620 CHMP6Q96FZ7 201 aa16.37■□□□□ 0.21
PDE1B-207ENST00000550620 MTMR4Q9NYA4 1195 aa16.37■□□□□ 0.21
PDE1B-207ENST00000550620 ATAD5Q96QE3 1844 aa16.36■□□□□ 0.21
PDE1B-207ENST00000550620 DNM1LO00429 736 aa16.36■□□□□ 0.21
PDE1B-207ENST00000550620 PPFIA2O75334 1257 aa16.36■□□□□ 0.21
PDE1B-207ENST00000550620 ITGA4P13612 1032 aa16.36■□□□□ 0.21
PDE1B-207ENST00000550620 SLF2Q8IX21 1173 aa16.36■□□□□ 0.21
PDE1B-207ENST00000550620 MARCH10Q8NA82 808 aaPredicted RBP16.36■□□□□ 0.21
PDE1B-207ENST00000550620 LINC00116Q8NCU8 138 aa16.36■□□□□ 0.21
PDE1B-207ENST00000550620 RBM46Q8TBY0 533 aaKnown RBP16.36■□□□□ 0.21
PDE1B-207ENST00000550620 TLCD1Q96CP7 247 aa16.36■□□□□ 0.21
PDE1B-207ENST00000550620 GLT8D2Q9H1C3 349 aa16.36■□□□□ 0.21
PDE1B-207ENST00000550620 MCM8Q9UJA3 840 aa16.36■□□□□ 0.21
PDE1B-207ENST00000550620 DDX60LQ5H9U9 1706 aaKnown RBP16.36■□□□□ 0.21
PDE1B-207ENST00000550620 GOLGA6L10A0A0M3HER8 536 aa16.36■□□□□ 0.21
PDE1B-207ENST00000550620 PDXKO00764 312 aa16.36■□□□□ 0.21
PDE1B-207ENST00000550620 SLC16A3O15427 465 aaKnown RBP16.36■□□□□ 0.21
PDE1B-207ENST00000550620 DNAJC8O75937 253 aaPredicted RBP16.36■□□□□ 0.21
PDE1B-207ENST00000550620 RPL13P26373 211 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms