RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 SPATA31E1Q6ZUB1 1445 aa9.42□□□□□ -0.9
PPFIA2-220ENST00000550584 F6X3S4 739 aa9.42□□□□□ -0.9
PPFIA2-220ENST00000550584 F8VZ95 297 aa9.42□□□□□ -0.9
PPFIA2-220ENST00000550584 EIF3DO15371 548 aaKnown RBP eCLIP9.42□□□□□ -0.9
PPFIA2-220ENST00000550584 DTNBO60941 627 aa9.42□□□□□ -0.9
PPFIA2-220ENST00000550584 C21orf59P57076 290 aa9.42□□□□□ -0.9
PPFIA2-220ENST00000550584 NLRP11P59045 1033 aaKnown RBP9.42□□□□□ -0.9
PPFIA2-220ENST00000550584 NONOQ15233 471 aaKnown RBP eCLIP9.42□□□□□ -0.9
PPFIA2-220ENST00000550584 CEP78Q5JTW2 689 aa9.42□□□□□ -0.9
PPFIA2-220ENST00000550584 NXNQ6DKJ4 435 aa9.42□□□□□ -0.9
PPFIA2-220ENST00000550584 GALNT17Q6IS24 598 aa9.42□□□□□ -0.9
PPFIA2-220ENST00000550584 BTNL9Q6UXG8 535 aa9.42□□□□□ -0.9
PPFIA2-220ENST00000550584 MCM10Q7L590 875 aa9.42□□□□□ -0.9
PPFIA2-220ENST00000550584 SETD3Q86TU7 594 aaPredicted RBP9.42□□□□□ -0.9
PPFIA2-220ENST00000550584 ZNF444Q8N0Y2 327 aaPredicted RBP9.42□□□□□ -0.9
PPFIA2-220ENST00000550584 ZNF579Q8NAF0 562 aaKnown RBP9.42□□□□□ -0.9
PPFIA2-220ENST00000550584 U2AF1L4Q8WU68 220 aaKnown RBP9.42□□□□□ -0.9
PPFIA2-220ENST00000550584 LRRC39Q96DD0 335 aa9.42□□□□□ -0.9
PPFIA2-220ENST00000550584 MAGED4Q96JG8 741 aa9.42□□□□□ -0.9
PPFIA2-220ENST00000550584 CNPY3Q9BT09 278 aa9.42□□□□□ -0.9
PPFIA2-220ENST00000550584 KLHL4Q9C0H6 718 aa9.42□□□□□ -0.9
PPFIA2-220ENST00000550584 ISCUQ9H1K1 167 aa9.42□□□□□ -0.9
PPFIA2-220ENST00000550584 SENP3Q9H4L4 574 aaPredicted RBP9.42□□□□□ -0.9
PPFIA2-220ENST00000550584 SLC38A10Q9HBR0 1119 aa9.42□□□□□ -0.9
PPFIA2-220ENST00000550584 PCDHA5Q9Y5H7 936 aa9.42□□□□□ -0.9
PPFIA2-220ENST00000550584 ZMYM6O95789 1325 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 GCC2Q8IWJ2 1684 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 CNOT3O75175 753 aaKnown RBP9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 CALB2P22676 271 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 KIF11P52732 1056 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 BLMHQ13867 455 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 ADCK5Q3MIX3 580 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 METTL24Q5JXM2 366 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 WLSQ5T9L3 541 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 PPP4R4Q6NUP7 873 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 TSHZ1Q6ZSZ6 1077 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 RSAD2Q8WXG1 361 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 WDR24Q96S15 920 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 MRPS26Q9BYN8 205 aaKnown RBP9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 PPARGC1AQ9UBK2 798 aaKnown RBP9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 KDM3AQ9Y4C1 1321 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 PDLIM1O00151 329 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 RANBP6O60518 1105 aaKnown RBP9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 RPS6KA2Q15349 733 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 TRMT5Q32P41 509 aaKnown RBP9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 PDCD4Q53EL6 469 aaKnown RBP9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 HDDC2Q7Z4H3 204 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 TRPV6Q9H1D0 765 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 DISC1Q9NRI5 854 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 TARBP1Q13395 1621 aaKnown RBP9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 RPAP1Q9BWH6 1393 aaPredicted RBP9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 STX7O15400 261 aaKnown RBP9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 SLC7A5Q01650 507 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 GEN1Q17RS7 908 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 TCP11X2Q5H9J9 407 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 HAUS3Q68CZ6 603 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 ZNF280DQ6N043 979 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 RNF207Q6ZRF8 634 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 RHOT2Q8IXI1 618 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 ARL10Q8N8L6 244 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 C1orf50Q9BV19 199 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 TNFRSF8P28908 595 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 LRRC63Q05C16 580 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 ARID5BQ14865 1188 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 MINDY2Q8NBR6 621 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 ATXN2LQ8WWM7 1075 aaKnown RBP9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 CHAMP1Q96JM3 812 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 TCEANC2Q96MN5 208 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 LRRC2Q9BYS8 371 aa9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 FOXP1Q9H334 677 aaPredicted RBP9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 FAM207AQ9NSI2 230 aaPredicted RBP9.41□□□□□ -0.9
PPFIA2-220ENST00000550584 EXOC3O60645 756 aa9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 BRAFP15056 766 aa9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 CD302Q8IX05 232 aa9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 SLC26A7Q8TE54 656 aa9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 ZIM3Q96PE6 472 aa9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 PRMT1Q99873 361 aaKnown RBP9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 LZTS2Q9BRK4 669 aa9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 BEGAINQ9BUH8 593 aa9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 OSBPL8Q9BZF1 889 aa9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 MKNK2Q9HBH9 465 aa9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 UBN1Q9NPG3 1134 aa9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 SAMD9Q5K651 1589 aa9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 PPIP5K1Q6PFW1 1433 aa9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 PTPN4P29074 926 aa9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 KRT25Q7Z3Z0 450 aa9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 CCDC125Q86Z20 511 aa9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 OR9Q1Q8NGQ5 310 aa9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 CDK19Q9BWU1 502 aa9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 TCP11X1B4DZS4 312 aa9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 RASA4BC9J798 803 aa9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 RASA4O43374 803 aa9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 KRT37O76014 449 aa9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 BAG3O95817 575 aa9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 SKIV2L2P42285 1042 aaKnown RBP9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 SF3A3Q12874 501 aaKnown RBP eCLIP9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 MIS18BP1Q6P0N0 1132 aa9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 MARK2Q7KZI7 788 aaKnown RBP9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 RBM46Q8TBY0 533 aaKnown RBP9.4□□□□□ -0.9
PPFIA2-220ENST00000550584 CYP39A1Q9NYL5 469 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms