RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 TRPV2Q9Y5S1 764 aa24.76■■□□□ 1.55
SMARCC2-210ENST00000550519 IGKV6D-21A0A0A0MT36 114 aa24.75■■□□□ 1.55
SMARCC2-210ENST00000550519 SMCO2A6NFE2 343 aa24.75■■□□□ 1.55
SMARCC2-210ENST00000550519 CLK2P49760 499 aaKnown RBP24.75■■□□□ 1.55
SMARCC2-210ENST00000550519 AP3B2Q13367 1082 aa24.75■■□□□ 1.55
SMARCC2-210ENST00000550519 CTC1Q2NKJ3 1217 aa24.75■■□□□ 1.55
SMARCC2-210ENST00000550519 ADCK5Q3MIX3 580 aa24.75■■□□□ 1.55
SMARCC2-210ENST00000550519 PLVAPQ9BX97 442 aa24.75■■□□□ 1.55
SMARCC2-210ENST00000550519 CLDND1Q9NY35 253 aa24.75■■□□□ 1.55
SMARCC2-210ENST00000550519 PADI3Q9ULW8 664 aa24.75■■□□□ 1.55
SMARCC2-210ENST00000550519 IGSF9BQ9UPX0 1349 aa24.75■■□□□ 1.55
SMARCC2-210ENST00000550519 SMIM35A0A1B0GVV1 85 aa24.74■■□□□ 1.55
SMARCC2-210ENST00000550519 POTEB3A0JP26 581 aa24.74■■□□□ 1.55
SMARCC2-210ENST00000550519 FAM86C2PA6NEL3 165 aa24.74■■□□□ 1.55
SMARCC2-210ENST00000550519 M0QZ92 97 aa24.74■■□□□ 1.55
SMARCC2-210ENST00000550519 SSTR3P32745 418 aaPredicted RBP24.74■■□□□ 1.55
SMARCC2-210ENST00000550519 LTBRP36941 435 aa24.74■■□□□ 1.55
SMARCC2-210ENST00000550519 SLC26A2P50443 739 aa24.74■■□□□ 1.55
SMARCC2-210ENST00000550519 TMEM62Q0P6H9 643 aa24.74■■□□□ 1.55
SMARCC2-210ENST00000550519 POTEBQ6S5H4 581 aa24.74■■□□□ 1.55
SMARCC2-210ENST00000550519 EP400NLQ6ZTU2 488 aa24.74■■□□□ 1.55
SMARCC2-210ENST00000550519 NME8Q8N427 588 aa24.74■■□□□ 1.55
SMARCC2-210ENST00000550519 CELF4Q9BZC1 486 aaKnown RBP24.74■■□□□ 1.55
SMARCC2-210ENST00000550519 GLT8D2Q9H1C3 349 aa24.74■■□□□ 1.55
SMARCC2-210ENST00000550519 TMEM260Q9NX78 707 aa24.74■■□□□ 1.55
SMARCC2-210ENST00000550519 HCN4Q9Y3Q4 1203 aa24.74■■□□□ 1.55
SMARCC2-210ENST00000550519 KDM3AQ9Y4C1 1321 aa24.74■■□□□ 1.55
SMARCC2-210ENST00000550519 CCNE2O96020 404 aa24.73■■□□□ 1.55
SMARCC2-210ENST00000550519 CDC27P30260 824 aa24.73■■□□□ 1.55
SMARCC2-210ENST00000550519 RCAN1P53805 252 aa24.73■■□□□ 1.55
SMARCC2-210ENST00000550519 HYAL1Q12794 435 aa24.73■■□□□ 1.55
SMARCC2-210ENST00000550519 MTHFD1LQ6UB35 978 aa24.73■■□□□ 1.55
SMARCC2-210ENST00000550519 NIPA1Q7RTP0 329 aa24.73■■□□□ 1.55
SMARCC2-210ENST00000550519 NPAS4Q8IUM7 802 aa24.73■■□□□ 1.55
SMARCC2-210ENST00000550519 CMTR2Q8IYT2 770 aaKnown RBP24.73■■□□□ 1.55
SMARCC2-210ENST00000550519 FAM50BQ9Y247 325 aa24.73■■□□□ 1.55
SMARCC2-210ENST00000550519 GOLGA8AA7E2F4 631 aa24.72■■□□□ 1.55
SMARCC2-210ENST00000550519 GOLGA8BA8MQT2 603 aa24.72■■□□□ 1.55
SMARCC2-210ENST00000550519 MMP1P03956 469 aa24.72■■□□□ 1.55
SMARCC2-210ENST00000550519 CAMK1Q14012 370 aa24.72■■□□□ 1.55
SMARCC2-210ENST00000550519 ABHD15Q6UXT9 468 aa24.72■■□□□ 1.55
SMARCC2-210ENST00000550519 SKAP1Q86WV1 359 aa24.72■■□□□ 1.55
SMARCC2-210ENST00000550519 P2RX5Q93086 422 aa24.72■■□□□ 1.55
SMARCC2-210ENST00000550519 PRKAG3Q9UGI9 489 aa24.72■■□□□ 1.55
SMARCC2-210ENST00000550519 PLAGL2Q9UPG8 496 aa24.72■■□□□ 1.55
SMARCC2-210ENST00000550519 MRPL42Q9Y6G3 142 aaKnown RBP24.72■■□□□ 1.55
SMARCC2-210ENST00000550519 KLF18A0A0U1RQI7 1052 aa24.71■■□□□ 1.55
SMARCC2-210ENST00000550519 FAM86B1E9PN63 330 aa24.71■■□□□ 1.55
SMARCC2-210ENST00000550519 FAM86B2P0C5J1 330 aa24.71■■□□□ 1.55
SMARCC2-210ENST00000550519 KRT76Q01546 638 aa24.71■■□□□ 1.55
SMARCC2-210ENST00000550519 PAK2Q13177 524 aa24.71■■□□□ 1.55
SMARCC2-210ENST00000550519 KRT32Q14532 448 aa24.71■■□□□ 1.55
SMARCC2-210ENST00000550519 TMX1Q9H3N1 280 aa24.71■■□□□ 1.55
SMARCC2-210ENST00000550519 ALG13Q9NP73 1137 aaKnown RBP24.71■■□□□ 1.55
SMARCC2-210ENST00000550519 DHX15O43143 795 aaKnown RBP24.7■■□□□ 1.54
SMARCC2-210ENST00000550519 HBP1O60381 514 aa24.7■■□□□ 1.54
SMARCC2-210ENST00000550519 STAG3L1P0CL83 205 aa24.7■■□□□ 1.54
SMARCC2-210ENST00000550519 SCG2P13521 617 aa24.7■■□□□ 1.54
SMARCC2-210ENST00000550519 ALADP13716 330 aa24.7■■□□□ 1.54
SMARCC2-210ENST00000550519 KLRC1P26715 233 aa24.7■■□□□ 1.54
SMARCC2-210ENST00000550519 ZNF76P36508 570 aa24.7■■□□□ 1.54
SMARCC2-210ENST00000550519 ZP2Q05996 745 aa24.7■■□□□ 1.54
SMARCC2-210ENST00000550519 NAALADL2Q58DX5 795 aa24.7■■□□□ 1.54
SMARCC2-210ENST00000550519 ATP8B4Q8TF62 1192 aa24.7■■□□□ 1.54
SMARCC2-210ENST00000550519 CRYGNQ8WXF5 182 aa24.7■■□□□ 1.54
SMARCC2-210ENST00000550519 IGLV3-22A0A075B6J6 115 aa24.69■■□□□ 1.54
SMARCC2-210ENST00000550519 C19orf67A6NJJ6 358 aa24.69■■□□□ 1.54
SMARCC2-210ENST00000550519 CYP3A4P08684 503 aa24.69■■□□□ 1.54
SMARCC2-210ENST00000550519 ADD1P35611 737 aaKnown RBP24.69■■□□□ 1.54
SMARCC2-210ENST00000550519 DLX2Q07687 328 aaPredicted RBP24.69■■□□□ 1.54
SMARCC2-210ENST00000550519 PFKFB3Q16875 520 aaPredicted RBP24.69■■□□□ 1.54
SMARCC2-210ENST00000550519 FAM43BQ6ZT52 329 aaPredicted RBP24.69■■□□□ 1.54
SMARCC2-210ENST00000550519 PLA2G4DQ86XP0 818 aa24.69■■□□□ 1.54
SMARCC2-210ENST00000550519 CCDC60Q8IWA6 550 aaPredicted RBP24.69■■□□□ 1.54
SMARCC2-210ENST00000550519 PRR33A8MZF0 331 aa24.68■■□□□ 1.54
SMARCC2-210ENST00000550519 DDX39AO00148 427 aaKnown RBP24.68■■□□□ 1.54
SMARCC2-210ENST00000550519 BACH1O14867 736 aa24.68■■□□□ 1.54
SMARCC2-210ENST00000550519 HMGB1P09429 215 aaKnown RBP24.68■■□□□ 1.54
SMARCC2-210ENST00000550519 GTF2F1P35269 517 aaKnown RBP eCLIP24.68■■□□□ 1.54
SMARCC2-210ENST00000550519 TMEM266Q2M3C6 531 aa24.68■■□□□ 1.54
SMARCC2-210ENST00000550519 JAKMIP3Q5VZ66 844 aa24.68■■□□□ 1.54
SMARCC2-210ENST00000550519 FAM160B1Q5W0V3 765 aa24.68■■□□□ 1.54
SMARCC2-210ENST00000550519 ADHFE1Q8IWW8 467 aa24.68■■□□□ 1.54
SMARCC2-210ENST00000550519 KIAA0319LQ8IZA0 1049 aa24.68■■□□□ 1.54
SMARCC2-210ENST00000550519 SPPL3Q8TCT6 385 aa24.68■■□□□ 1.54
SMARCC2-210ENST00000550519 COL1A2P08123 1366 aa24.67■■□□□ 1.54
SMARCC2-210ENST00000550519 ESYT2A0FGR8 921 aa24.67■■□□□ 1.54
SMARCC2-210ENST00000550519 ITGB1P05556 798 aa24.67■■□□□ 1.54
SMARCC2-210ENST00000550519 DNAJB1P25685 340 aa24.67■■□□□ 1.54
SMARCC2-210ENST00000550519 SMAD2Q15796 467 aaKnown RBP24.67■■□□□ 1.54
SMARCC2-210ENST00000550519 CENPQQ7L2Z9 268 aaPredicted RBP24.67■■□□□ 1.54
SMARCC2-210ENST00000550519 ZMYND12Q9H0C1 365 aa24.67■■□□□ 1.54
SMARCC2-210ENST00000550519 CDHR5Q9HBB8 845 aa24.67■■□□□ 1.54
SMARCC2-210ENST00000550519 ERVK-5Q9HDB9 667 aa24.67■■□□□ 1.54
SMARCC2-210ENST00000550519 ZNF302Q9NR11 478 aa24.67■■□□□ 1.54
SMARCC2-210ENST00000550519 ATG2AQ2TAZ0 1938 aa24.67■■□□□ 1.54
SMARCC2-210ENST00000550519 ZBTB42B2RXF5 422 aa24.66■■□□□ 1.54
SMARCC2-210ENST00000550519 IPO5O00410 1097 aaKnown RBP24.66■■□□□ 1.54
SMARCC2-210ENST00000550519 CDC45O75419 566 aa24.66■■□□□ 1.54
SMARCC2-210ENST00000550519 ATP4AP20648 1035 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms