RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 TMEM150BA6NC51 233 aa11.07□□□□□ -0.64
HDAC7-229ENST00000549883 BTBD18B2RXH4 712 aa11.07□□□□□ -0.64
HDAC7-229ENST00000549883 GAS7O60861 476 aa11.07□□□□□ -0.64
HDAC7-229ENST00000549883 ACTN1P12814 892 aa11.07□□□□□ -0.64
HDAC7-229ENST00000549883 LRCH2Q5VUJ6 765 aa11.07□□□□□ -0.64
HDAC7-229ENST00000549883 KRT40Q6A162 431 aa11.07□□□□□ -0.64
HDAC7-229ENST00000549883 ZNF746Q6NUN9 644 aaPredicted RBP11.07□□□□□ -0.64
HDAC7-229ENST00000549883 FAM117BQ6P1L5 589 aa11.07□□□□□ -0.64
HDAC7-229ENST00000549883 B3GNT9Q6UX72 402 aa11.07□□□□□ -0.64
HDAC7-229ENST00000549883 HERC6Q8IVU3 1022 aa11.07□□□□□ -0.64
HDAC7-229ENST00000549883 ATP8B4Q8TF62 1192 aa11.07□□□□□ -0.64
HDAC7-229ENST00000549883 RIT2Q99578 217 aa11.07□□□□□ -0.64
HDAC7-229ENST00000549883 MTIF3Q9H2K0 278 aaKnown RBP11.07□□□□□ -0.64
HDAC7-229ENST00000549883 PRDM12Q9H4Q4 367 aa11.07□□□□□ -0.64
HDAC7-229ENST00000549883 CERS4Q9HA82 394 aa11.07□□□□□ -0.64
HDAC7-229ENST00000549883 DISC1Q9NRI5 854 aa11.07□□□□□ -0.64
HDAC7-229ENST00000549883 DDX25Q9UHL0 483 aaKnown RBP11.07□□□□□ -0.64
HDAC7-229ENST00000549883 STXBP5LQ9Y2K9 1186 aa11.07□□□□□ -0.64
HDAC7-229ENST00000549883 PCDHA10Q9Y5I2 948 aa11.07□□□□□ -0.64
HDAC7-229ENST00000549883 MAFBQ9Y5Q3 323 aaPredicted RBP11.07□□□□□ -0.64
HDAC7-229ENST00000549883 CDY2AQ9Y6F7 541 aa11.07□□□□□ -0.64
HDAC7-229ENST00000549883 EYSQ5T1H1 3165 aa11.07□□□□□ -0.64
HDAC7-229ENST00000549883 CHD9Q3L8U1 2897 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 EPOPA6NHQ4 379 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 RRN3P2A6NIE6 340 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 RFXAPO00287 272 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 EML1O00423 815 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 EIF5BO60841 1220 aaKnown RBP11.06□□□□□ -0.64
HDAC7-229ENST00000549883 MMP1P03956 469 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 CA3P07451 260 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 GHRP10912 638 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 KLRC1P26715 233 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 KRT76Q01546 638 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 ADGRE1Q14246 886 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 LPIN1Q14693 890 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 FAM160B1Q5W0V3 765 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 MTHFD1LQ6UB35 978 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 NEK8Q86SG6 692 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 POTEDQ86YR6 584 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 FAM177A1Q8N128 213 aaPredicted RBP11.06□□□□□ -0.64
HDAC7-229ENST00000549883 HAS1Q92839 578 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 PPP1R16BQ96T49 567 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 SH2D3AQ9BRG2 576 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 TEKT3Q9BXF9 490 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 AGO3Q9H9G7 860 aaKnown RBP11.06□□□□□ -0.64
HDAC7-229ENST00000549883 CDHR5Q9HBB8 845 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 MSRAQ9UJ68 235 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 SAMM50Q9Y512 469 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 PCDHA2Q9Y5H9 948 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 PCDHA11Q9Y5I1 949 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 CHD7Q9P2D1 2997 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 IGSF9BQ9UPX0 1349 aa11.06□□□□□ -0.64
HDAC7-229ENST00000549883 ABHD14A-ACY1A0A1B0GW23 586 aa11.05□□□□□ -0.64
HDAC7-229ENST00000549883 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.05□□□□□ -0.64
HDAC7-229ENST00000549883 HBP1O60381 514 aa11.05□□□□□ -0.64
HDAC7-229ENST00000549883 CCNT1O60563 726 aaKnown RBP11.05□□□□□ -0.64
HDAC7-229ENST00000549883 BAIAP3O94812 1187 aa11.05□□□□□ -0.64
HDAC7-229ENST00000549883 STBD1O95210 358 aa11.05□□□□□ -0.64
HDAC7-229ENST00000549883 PARNO95453 639 aaKnown RBP11.05□□□□□ -0.64
HDAC7-229ENST00000549883 C22orf31O95567 290 aa11.05□□□□□ -0.64
HDAC7-229ENST00000549883 PSAPP07602 524 aa11.05□□□□□ -0.64
HDAC7-229ENST00000549883 KRT2P35908 639 aa11.05□□□□□ -0.64
HDAC7-229ENST00000549883 KCNJ6P48051 423 aa11.05□□□□□ -0.64
HDAC7-229ENST00000549883 MRPS6P82932 125 aaKnown RBP11.05□□□□□ -0.64
HDAC7-229ENST00000549883 IKBKEQ14164 716 aa11.05□□□□□ -0.64
HDAC7-229ENST00000549883 RAB30Q15771 203 aa11.05□□□□□ -0.64
HDAC7-229ENST00000549883 FBXO47Q5MNV8 452 aa11.05□□□□□ -0.64
HDAC7-229ENST00000549883 TAF2Q6P1X5 1199 aa11.05□□□□□ -0.64
HDAC7-229ENST00000549883 MOXD1Q6UVY6 613 aa11.05□□□□□ -0.64
HDAC7-229ENST00000549883 RPAINQ86UA6 219 aa11.05□□□□□ -0.64
HDAC7-229ENST00000549883 CKAP2LQ8IYA6 745 aa11.05□□□□□ -0.64
HDAC7-229ENST00000549883 SMAP1Q8IYB5 467 aaPredicted RBP11.05□□□□□ -0.64
HDAC7-229ENST00000549883 DIS3L2Q8IYB7 885 aaKnown RBP11.05□□□□□ -0.64
HDAC7-229ENST00000549883 KIAA0319LQ8IZA0 1049 aa11.05□□□□□ -0.64
HDAC7-229ENST00000549883 WASF1Q92558 559 aa11.05□□□□□ -0.64
HDAC7-229ENST00000549883 SLC9A7Q96T83 725 aa11.05□□□□□ -0.64
HDAC7-229ENST00000549883 KCNMB3Q9NPA1 279 aa11.05□□□□□ -0.64
HDAC7-229ENST00000549883 VAV3Q9UKW4 847 aa11.05□□□□□ -0.64
HDAC7-229ENST00000549883 COL4A4P53420 1690 aaPredicted RBP11.04□□□□□ -0.64
HDAC7-229ENST00000549883 TTC3P53804 2025 aa11.04□□□□□ -0.64
HDAC7-229ENST00000549883 TMEM265A0A087WTH1 108 aa11.04□□□□□ -0.64
HDAC7-229ENST00000549883 WDR64B1ANS9 1081 aa11.04□□□□□ -0.64
HDAC7-229ENST00000549883 CAND2O75155 1236 aa11.04□□□□□ -0.64
HDAC7-229ENST00000549883 XBP1P17861 261 aa11.04□□□□□ -0.64
HDAC7-229ENST00000549883 SLC26A2P50443 739 aa11.04□□□□□ -0.64
HDAC7-229ENST00000549883 PRKCEQ02156 737 aa11.04□□□□□ -0.64
HDAC7-229ENST00000549883 TAP1Q03518 808 aa11.04□□□□□ -0.64
HDAC7-229ENST00000549883 TMEM266Q2M3C6 531 aa11.04□□□□□ -0.64
HDAC7-229ENST00000549883 PPP2R2DQ66LE6 453 aa11.04□□□□□ -0.64
HDAC7-229ENST00000549883 MIER3Q7Z3K6 550 aa11.04□□□□□ -0.64
HDAC7-229ENST00000549883 RTN4RL1Q86UN2 441 aaPredicted RBP11.04□□□□□ -0.64
HDAC7-229ENST00000549883 LRRC71Q8N4P6 559 aa11.04□□□□□ -0.64
HDAC7-229ENST00000549883 USP38Q8NB14 1042 aa11.04□□□□□ -0.64
HDAC7-229ENST00000549883 BANK1Q8NDB2 785 aa11.04□□□□□ -0.64
HDAC7-229ENST00000549883 PHOSPHO2Q8TCD6 241 aa11.04□□□□□ -0.64
HDAC7-229ENST00000549883 TMEM40Q8WWA1 233 aa11.04□□□□□ -0.64
HDAC7-229ENST00000549883 LINC01599Q8WXQ3 324 aa11.04□□□□□ -0.64
HDAC7-229ENST00000549883 SEPT8Q92599 483 aa11.04□□□□□ -0.64
HDAC7-229ENST00000549883 ZNF668Q96K58 619 aaPredicted RBP11.04□□□□□ -0.64
HDAC7-229ENST00000549883 TBC1D32Q96NH3 1257 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms