RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 TUBE1Q9UJT0 475 aa11.86□□□□□ -0.51
CCDC38-207ENST00000549752 YBX2Q9Y2T7 364 aaKnown RBP11.86□□□□□ -0.51
CCDC38-207ENST00000549752 PRRC2BQ5JSZ5 2229 aaKnown RBP11.86□□□□□ -0.51
CCDC38-207ENST00000549752 COL4A4P53420 1690 aaPredicted RBP11.85□□□□□ -0.51
CCDC38-207ENST00000549752 M0QZ92 97 aa11.85□□□□□ -0.51
CCDC38-207ENST00000549752 CA3P07451 260 aa11.85□□□□□ -0.51
CCDC38-207ENST00000549752 XBP1P17861 261 aa11.85□□□□□ -0.51
CCDC38-207ENST00000549752 STAT5BP51692 787 aa11.85□□□□□ -0.51
CCDC38-207ENST00000549752 NLRP5P59047 1200 aa11.85□□□□□ -0.51
CCDC38-207ENST00000549752 ACTR2P61160 394 aa11.85□□□□□ -0.51
CCDC38-207ENST00000549752 CCT2P78371 535 aaKnown RBP11.85□□□□□ -0.51
CCDC38-207ENST00000549752 TOB2Q14106 344 aaPredicted RBP11.85□□□□□ -0.51
CCDC38-207ENST00000549752 GRIK4Q16099 956 aa11.85□□□□□ -0.51
CCDC38-207ENST00000549752 PKN1Q16512 942 aa11.85□□□□□ -0.51
CCDC38-207ENST00000549752 PLEKHG4Q58EX7 1191 aa11.85□□□□□ -0.51
CCDC38-207ENST00000549752 FAM26DQ5JW98 314 aa11.85□□□□□ -0.51
CCDC38-207ENST00000549752 GALNT17Q6IS24 598 aa11.85□□□□□ -0.51
CCDC38-207ENST00000549752 TRAF7Q6Q0C0 670 aa11.85□□□□□ -0.51
CCDC38-207ENST00000549752 FAM43BQ6ZT52 329 aaPredicted RBP11.85□□□□□ -0.51
CCDC38-207ENST00000549752 PGBD1Q96JS3 809 aa11.85□□□□□ -0.51
CCDC38-207ENST00000549752 RAD9AQ99638 391 aa11.85□□□□□ -0.51
CCDC38-207ENST00000549752 ZNF577Q9BSK1 485 aa11.85□□□□□ -0.51
CCDC38-207ENST00000549752 TMEM260Q9NX78 707 aa11.85□□□□□ -0.51
CCDC38-207ENST00000549752 IPO5O00410 1097 aaKnown RBP11.84□□□□□ -0.51
CCDC38-207ENST00000549752 ATMINO43313 823 aaPredicted RBP11.84□□□□□ -0.51
CCDC38-207ENST00000549752 ATG7O95352 703 aa11.84□□□□□ -0.51
CCDC38-207ENST00000549752 GJB5O95377 273 aa11.84□□□□□ -0.51
CCDC38-207ENST00000549752 ARP10275 920 aa11.84□□□□□ -0.51
CCDC38-207ENST00000549752 IGFBP4P22692 258 aa11.84□□□□□ -0.51
CCDC38-207ENST00000549752 MARK3P27448 753 aa11.84□□□□□ -0.51
CCDC38-207ENST00000549752 USP11P51784 963 aa11.84□□□□□ -0.51
CCDC38-207ENST00000549752 HIC1Q14526 733 aa11.84□□□□□ -0.51
CCDC38-207ENST00000549752 GPNMBQ14956 572 aa11.84□□□□□ -0.51
CCDC38-207ENST00000549752 IER5Q5VY09 327 aa11.84□□□□□ -0.51
CCDC38-207ENST00000549752 ASTLQ6HA08 431 aaPredicted RBP11.84□□□□□ -0.51
CCDC38-207ENST00000549752 MIS18BP1Q6P0N0 1132 aa11.84□□□□□ -0.51
CCDC38-207ENST00000549752 SMAP1Q8IYB5 467 aaPredicted RBP11.84□□□□□ -0.51
CCDC38-207ENST00000549752 DBF4BQ8NFT6 615 aa11.84□□□□□ -0.51
CCDC38-207ENST00000549752 CYP2W1Q8TAV3 490 aa11.84□□□□□ -0.51
CCDC38-207ENST00000549752 WNT8BQ93098 351 aa11.84□□□□□ -0.51
CCDC38-207ENST00000549752 UPF3BQ9BZI7 483 aaKnown RBP11.84□□□□□ -0.51
CCDC38-207ENST00000549752 NCOA5Q9HCD5 579 aaKnown RBP11.84□□□□□ -0.51
CCDC38-207ENST00000549752 INSL6Q9Y581 213 aa11.84□□□□□ -0.51
CCDC38-207ENST00000549752 NCOR1O75376 2440 aa11.84□□□□□ -0.51
CCDC38-207ENST00000549752 COL1A2P08123 1366 aa11.83□□□□□ -0.52
CCDC38-207ENST00000549752 POTEB3A0JP26 581 aa11.83□□□□□ -0.52
CCDC38-207ENST00000549752 MBLAC1A4D2B0 266 aaPredicted RBP11.83□□□□□ -0.52
CCDC38-207ENST00000549752 FAM86B1E9PN63 330 aa11.83□□□□□ -0.52
CCDC38-207ENST00000549752 DLL1O00548 723 aa11.83□□□□□ -0.52
CCDC38-207ENST00000549752 BACH1O14867 736 aa11.83□□□□□ -0.52
CCDC38-207ENST00000549752 HBP1O60381 514 aa11.83□□□□□ -0.52
CCDC38-207ENST00000549752 CTSHP09668 335 aa11.83□□□□□ -0.52
CCDC38-207ENST00000549752 FAM86B2P0C5J1 330 aa11.83□□□□□ -0.52
CCDC38-207ENST00000549752 INSRRP14616 1297 aa11.83□□□□□ -0.52
CCDC38-207ENST00000549752 MYOGP15173 224 aa11.83□□□□□ -0.52
CCDC38-207ENST00000549752 CIITAP33076 1130 aa11.83□□□□□ -0.52
CCDC38-207ENST00000549752 KRT76Q01546 638 aa11.83□□□□□ -0.52
CCDC38-207ENST00000549752 MBTPS1Q14703 1052 aa11.83□□□□□ -0.52
CCDC38-207ENST00000549752 ZNF746Q6NUN9 644 aaPredicted RBP11.83□□□□□ -0.52
CCDC38-207ENST00000549752 POTEBQ6S5H4 581 aa11.83□□□□□ -0.52
CCDC38-207ENST00000549752 NME8Q8N427 588 aa11.83□□□□□ -0.52
CCDC38-207ENST00000549752 USP38Q8NB14 1042 aa11.83□□□□□ -0.52
CCDC38-207ENST00000549752 IL27Q8NEV9 243 aa11.83□□□□□ -0.52
CCDC38-207ENST00000549752 CRYGNQ8WXF5 182 aa11.83□□□□□ -0.52
CCDC38-207ENST00000549752 IFIH1Q9BYX4 1025 aaKnown RBP11.83□□□□□ -0.52
CCDC38-207ENST00000549752 SLKQ9H2G2 1235 aaPredicted RBP11.83□□□□□ -0.52
CCDC38-207ENST00000549752 VPS54Q9P1Q0 977 aa11.83□□□□□ -0.52
CCDC38-207ENST00000549752 PCDHA4Q9UN74 947 aa11.83□□□□□ -0.52
CCDC38-207ENST00000549752 SQORQ9Y6N5 450 aa11.83□□□□□ -0.52
CCDC38-207ENST00000549752 IGLV3-22A0A075B6J6 115 aa11.82□□□□□ -0.52
CCDC38-207ENST00000549752 DDX39AO00148 427 aaKnown RBP11.82□□□□□ -0.52
CCDC38-207ENST00000549752 PSAPP07602 524 aa11.82□□□□□ -0.52
CCDC38-207ENST00000549752 IGBP1P78318 339 aa11.82□□□□□ -0.52
CCDC38-207ENST00000549752 DEFB103AP81534 67 aa11.82□□□□□ -0.52
CCDC38-207ENST00000549752 TAP1Q03518 808 aa11.82□□□□□ -0.52
CCDC38-207ENST00000549752 ITGB3BPQ13352 177 aaPredicted RBP11.82□□□□□ -0.52
CCDC38-207ENST00000549752 PLCB4Q15147 1175 aa11.82□□□□□ -0.52
CCDC38-207ENST00000549752 PRR16Q569H4 304 aa11.82□□□□□ -0.52
CCDC38-207ENST00000549752 ODR4Q5SWX8 454 aa11.82□□□□□ -0.52
CCDC38-207ENST00000549752 PDXDC2PQ6P474 469 aa11.82□□□□□ -0.52
CCDC38-207ENST00000549752 HOMEZQ8IX15 550 aa11.82□□□□□ -0.52
CCDC38-207ENST00000549752 MYOCDQ8IZQ8 938 aa11.82□□□□□ -0.52
CCDC38-207ENST00000549752 WASF1Q92558 559 aa11.82□□□□□ -0.52
CCDC38-207ENST00000549752 SYMPKQ92797 1274 aaKnown RBP11.82□□□□□ -0.52
CCDC38-207ENST00000549752 ZNF302Q9NR11 478 aa11.82□□□□□ -0.52
CCDC38-207ENST00000549752 CEP131Q9UPN4 1083 aa11.82□□□□□ -0.52
CCDC38-207ENST00000549752 TELO2Q9Y4R8 837 aa11.82□□□□□ -0.52
CCDC38-207ENST00000549752 SAMM50Q9Y512 469 aa11.82□□□□□ -0.52
CCDC38-207ENST00000549752 PCDHA2Q9Y5H9 948 aa11.82□□□□□ -0.52
CCDC38-207ENST00000549752 PCDHA10Q9Y5I2 948 aa11.82□□□□□ -0.52
CCDC38-207ENST00000549752 REV3LO60673 3130 aa11.82□□□□□ -0.52
CCDC38-207ENST00000549752 COL4A6Q14031 1691 aa11.81□□□□□ -0.52
CCDC38-207ENST00000549752 IGKV6D-21A0A0A0MT36 114 aa11.81□□□□□ -0.52
CCDC38-207ENST00000549752 SMIM35A0A1B0GVV1 85 aa11.81□□□□□ -0.52
CCDC38-207ENST00000549752 POU3F3P20264 500 aaPredicted RBP11.81□□□□□ -0.52
CCDC38-207ENST00000549752 MRPS6P82932 125 aaKnown RBP11.81□□□□□ -0.52
CCDC38-207ENST00000549752 STK3Q13188 491 aa11.81□□□□□ -0.52
CCDC38-207ENST00000549752 ZNF484Q5JVG2 852 aa11.81□□□□□ -0.52
CCDC38-207ENST00000549752 ABHD15Q6UXT9 468 aa11.81□□□□□ -0.52
CCDC38-207ENST00000549752 CKAP2LQ8IYA6 745 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms