RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 ASPNQ9BXN1 380 aa4.68□□□□□ -1.66
APAF1-208ENST00000549007 PCDH11XQ9BZA7 1347 aa4.68□□□□□ -1.66
APAF1-208ENST00000549007 PCDH11YQ9BZA8 1340 aa4.68□□□□□ -1.66
APAF1-208ENST00000549007 MIS18AQ9NYP9 233 aa4.68□□□□□ -1.66
APAF1-208ENST00000549007 EDARQ9UNE0 448 aa4.68□□□□□ -1.66
APAF1-208ENST00000549007 DIS3Q9Y2L1 958 aaKnown RBP4.68□□□□□ -1.66
APAF1-208ENST00000549007 SHANK3Q9BYB0 1731 aa4.68□□□□□ -1.66
APAF1-208ENST00000549007 KDM6AO15550 1401 aaPredicted RBP4.67□□□□□ -1.66
APAF1-208ENST00000549007 AQP7O14520 342 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 SCG5P05408 212 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 GSTM1P09488 218 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 SLC9A1P19634 815 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 CCND1P24385 295 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 GMPRP36959 345 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 ETV3P41162 512 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 TMPOP42166 694 aaKnown RBP4.67□□□□□ -1.66
APAF1-208ENST00000549007 ERVK-21P61565 698 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 CWF19L1Q69YN2 538 aaKnown RBP4.67□□□□□ -1.66
APAF1-208ENST00000549007 DTWD1Q8N5C7 304 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 FAM181AQ8N9Y4 354 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 PARD3BQ8TEW8 1205 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 FUBP3Q96I24 572 aaKnown RBP eCLIP4.67□□□□□ -1.66
APAF1-208ENST00000549007 LUC7LQ9NQ29 371 aaKnown RBP4.67□□□□□ -1.66
APAF1-208ENST00000549007 ZKSCAN5Q9Y2L8 839 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 PARP4Q9UKK3 1724 aaKnown RBP4.67□□□□□ -1.66
APAF1-208ENST00000549007 MEFVO15553 781 aaPredicted RBP4.67□□□□□ -1.66
APAF1-208ENST00000549007 FBXO21O94952 628 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 HTRA3P83110 453 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 TRIM28Q13263 835 aaKnown RBP4.67□□□□□ -1.66
APAF1-208ENST00000549007 BRD3Q15059 726 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 BROXQ5VW32 411 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 CPZQ66K79 652 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 PNMA8AQ86V59 439 aaPredicted RBP4.67□□□□□ -1.66
APAF1-208ENST00000549007 IFNL2Q8IZJ0 200 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 IL17REQ8NFR9 667 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 ARPC5LQ9BPX5 153 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 APOBEC2Q9Y235 224 aaKnown RBP4.67□□□□□ -1.66
APAF1-208ENST00000549007 LAS1LQ9Y4W2 734 aaKnown RBP4.67□□□□□ -1.66
APAF1-208ENST00000549007 MAP3K5Q99683 1374 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.67□□□□□ -1.66
APAF1-208ENST00000549007 AURKAO14965 403 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 POU4F1Q01851 419 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 SLC39A6Q13433 755 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 AMOTQ4VCS5 1084 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 ANKRD34AQ69YU3 496 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 HEXIM2Q96MH2 286 aaKnown RBP4.67□□□□□ -1.66
APAF1-208ENST00000549007 HDAC8Q9BY41 377 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 AKTIPQ9H8T0 292 aa4.67□□□□□ -1.66
APAF1-208ENST00000549007 TOPORSQ9NS56 1045 aaPredicted RBP4.67□□□□□ -1.66
APAF1-208ENST00000549007 GNAT3A8MTJ3 354 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 RNMTO43148 476 aaKnown RBP4.66□□□□□ -1.66
APAF1-208ENST00000549007 CPP00450 1065 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 MYL3P08590 195 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 ELNP15502 786 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 GRM3Q14832 879 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 CLEC16AQ2KHT3 1053 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 DEFB132Q7Z7B7 95 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 RBM12BQ8IXT5 1001 aaKnown RBP4.66□□□□□ -1.66
APAF1-208ENST00000549007 FBXL6Q8N531 539 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 VPS37AQ8NEZ2 397 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 UTP4Q969X6 686 aaKnown RBP4.66□□□□□ -1.66
APAF1-208ENST00000549007 TCTN2Q96GX1 697 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 SLC39A13Q96H72 371 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 FOXP3Q9BZS1 431 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 PRDM5Q9NQX1 630 aaPredicted RBP4.66□□□□□ -1.66
APAF1-208ENST00000549007 SF3B6Q9Y3B4 125 aaKnown RBP4.66□□□□□ -1.66
APAF1-208ENST00000549007 PKD1L3Q7Z443 1732 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 ARVCFO00192 962 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 KCNQ3O43525 872 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 CAND2O75155 1236 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 MYL1P05976 194 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 SLURP2P0DP57 97 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 COL6A2P12110 1019 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 PDE6AP16499 860 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 FPR2P25090 351 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 PTX3P26022 381 aaPredicted RBP4.66□□□□□ -1.66
APAF1-208ENST00000549007 ADMP35318 185 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 KPNA1P52294 538 aaPredicted RBP4.66□□□□□ -1.66
APAF1-208ENST00000549007 OSTM1Q86WC4 334 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 RTF1Q92541 710 aaKnown RBP4.66□□□□□ -1.66
APAF1-208ENST00000549007 CDADC1Q9BWV3 514 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 CABP5Q9NP86 173 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 CATSPERZQ9NTU4 200 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 INTUQ9ULD6 942 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 TOGARAM1Q9Y4F4 1720 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 CREB3O43889 395 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 PCDHGA12O60330 932 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 MAP4P27816 1152 aaKnown RBP4.66□□□□□ -1.66
APAF1-208ENST00000549007 NOS3P29474 1203 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 FXR1P51114 621 aaKnown RBP eCLIP4.66□□□□□ -1.66
APAF1-208ENST00000549007 PAK1Q13153 545 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 ZNF267Q14586 743 aaPredicted RBP4.66□□□□□ -1.66
APAF1-208ENST00000549007 LINC00114Q6XXX2 140 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 LBX2Q6XYB7 198 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 EPM2AIP1Q7L775 607 aaPredicted RBP4.66□□□□□ -1.66
APAF1-208ENST00000549007 CATIPQ7Z7H3 387 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 IFNL3Q8IZI9 196 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 CHST14Q8NCH0 376 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 PIGBQ92521 554 aa4.66□□□□□ -1.66
APAF1-208ENST00000549007 IRF7Q92985 503 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms