RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 MRPS6P82932 125 aaKnown RBP12.9□□□□□ -0.34
BEST3-209ENST00000548658 STK3Q13188 491 aa12.9□□□□□ -0.34
BEST3-209ENST00000548658 TCTN1Q2MV58 587 aa12.9□□□□□ -0.34
BEST3-209ENST00000548658 ZNF484Q5JVG2 852 aa12.9□□□□□ -0.34
BEST3-209ENST00000548658 SWSAP1Q6NVH7 229 aa12.9□□□□□ -0.34
BEST3-209ENST00000548658 RUFY4Q6ZNE9 571 aa12.9□□□□□ -0.34
BEST3-209ENST00000548658 CKAP2LQ8IYA6 745 aa12.9□□□□□ -0.34
BEST3-209ENST00000548658 BLIDQ8IZY5 108 aa12.9□□□□□ -0.34
BEST3-209ENST00000548658 DAGLBQ8NCG7 672 aa12.9□□□□□ -0.34
BEST3-209ENST00000548658 ATXN2LQ8WWM7 1075 aaKnown RBP12.9□□□□□ -0.34
BEST3-209ENST00000548658 BBXQ8WY36 941 aaPredicted RBP12.9□□□□□ -0.34
BEST3-209ENST00000548658 PPM1EQ8WY54 764 aa12.9□□□□□ -0.34
BEST3-209ENST00000548658 TGS1Q96RS0 853 aaKnown RBP12.9□□□□□ -0.34
BEST3-209ENST00000548658 FTHL17Q9BXU8 183 aa12.9□□□□□ -0.34
BEST3-209ENST00000548658 LMCD1Q9NZU5 365 aa12.9□□□□□ -0.34
BEST3-209ENST00000548658 CEP131Q9UPN4 1083 aa12.9□□□□□ -0.34
BEST3-209ENST00000548658 SAMM50Q9Y512 469 aa12.9□□□□□ -0.34
BEST3-209ENST00000548658 COL1A2P08123 1366 aa12.9□□□□□ -0.34
BEST3-209ENST00000548658 EYSQ5T1H1 3165 aa12.89□□□□□ -0.35
BEST3-209ENST00000548658 WDR64B1ANS9 1081 aa12.89□□□□□ -0.35
BEST3-209ENST00000548658 PFKFB2O60825 505 aa12.89□□□□□ -0.35
BEST3-209ENST00000548658 GHRP10912 638 aa12.89□□□□□ -0.35
BEST3-209ENST00000548658 KLRC1P26715 233 aa12.89□□□□□ -0.35
BEST3-209ENST00000548658 SFNP31947 248 aa12.89□□□□□ -0.35
BEST3-209ENST00000548658 ERVK-21P61565 698 aa12.89□□□□□ -0.35
BEST3-209ENST00000548658 HTRA4P83105 476 aaPredicted RBP12.89□□□□□ -0.35
BEST3-209ENST00000548658 MGAT3Q09327 533 aa12.89□□□□□ -0.35
BEST3-209ENST00000548658 FBXO47Q5MNV8 452 aa12.89□□□□□ -0.35
BEST3-209ENST00000548658 MTHFD1LQ6UB35 978 aa12.89□□□□□ -0.35
BEST3-209ENST00000548658 MOXD1Q6UVY6 613 aa12.89□□□□□ -0.35
BEST3-209ENST00000548658 TSHZ1Q6ZSZ6 1077 aa12.89□□□□□ -0.35
BEST3-209ENST00000548658 TMCO2Q7Z6W1 182 aaPredicted RBP12.89□□□□□ -0.35
BEST3-209ENST00000548658 ZNF710Q8N1W2 664 aa12.89□□□□□ -0.35
BEST3-209ENST00000548658 RASGRP4Q8TDF6 673 aa12.89□□□□□ -0.35
BEST3-209ENST00000548658 TBCKQ8TEA7 893 aa12.89□□□□□ -0.35
BEST3-209ENST00000548658 WASF1Q92558 559 aa12.89□□□□□ -0.35
BEST3-209ENST00000548658 IL17RAQ96F46 866 aa12.89□□□□□ -0.35
BEST3-209ENST00000548658 FAM167AQ96KS9 214 aa12.89□□□□□ -0.35
BEST3-209ENST00000548658 SAMD11Q96NU1 681 aa12.89□□□□□ -0.35
BEST3-209ENST00000548658 YME1L1Q96TA2 773 aa12.89□□□□□ -0.35
BEST3-209ENST00000548658 LARP6Q9BRS8 491 aaKnown RBP12.89□□□□□ -0.35
BEST3-209ENST00000548658 FAM49AQ9H0Q0 323 aaPredicted RBP12.89□□□□□ -0.35
BEST3-209ENST00000548658 CERS4Q9HA82 394 aa12.89□□□□□ -0.35
BEST3-209ENST00000548658 MAFBQ9Y5Q3 323 aaPredicted RBP12.89□□□□□ -0.35
BEST3-209ENST00000548658 CDY2AQ9Y6F7 541 aa12.89□□□□□ -0.35
BEST3-209ENST00000548658 STK36Q9NRP7 1315 aa12.88□□□□□ -0.35
BEST3-209ENST00000548658 CHD9Q3L8U1 2897 aa12.88□□□□□ -0.35
BEST3-209ENST00000548658 UNC80Q8N2C7 3258 aa12.88□□□□□ -0.35
BEST3-209ENST00000548658 CYP3A7-CYP3A51PA0A087WV96 503 aa12.88□□□□□ -0.35
BEST3-209ENST00000548658 LCHNA4D1U4 455 aa12.88□□□□□ -0.35
BEST3-209ENST00000548658 LINC01553A4QN01 128 aa12.88□□□□□ -0.35
BEST3-209ENST00000548658 CYP3A7P24462 503 aa12.88□□□□□ -0.35
BEST3-209ENST00000548658 SCRN1Q12765 414 aa12.88□□□□□ -0.35
BEST3-209ENST00000548658 LPIN1Q14693 890 aa12.88□□□□□ -0.35
BEST3-209ENST00000548658 NONOQ15233 471 aaKnown RBP eCLIP12.88□□□□□ -0.35
BEST3-209ENST00000548658 CCDC85BQ15834 202 aaPredicted RBP12.88□□□□□ -0.35
BEST3-209ENST00000548658 AAK1Q2M2I8 961 aa12.88□□□□□ -0.35
BEST3-209ENST00000548658 Q4G0T1 1027 aa12.88□□□□□ -0.35
BEST3-209ENST00000548658 ODR4Q5SWX8 454 aa12.88□□□□□ -0.35
BEST3-209ENST00000548658 FAM117BQ6P1L5 589 aa12.88□□□□□ -0.35
BEST3-209ENST00000548658 KRT25Q7Z3Z0 450 aa12.88□□□□□ -0.35
BEST3-209ENST00000548658 CCDC60Q8IWA6 550 aaPredicted RBP12.88□□□□□ -0.35
BEST3-209ENST00000548658 LENG9Q96B70 501 aa12.88□□□□□ -0.35
BEST3-209ENST00000548658 CELF4Q9BZC1 486 aaKnown RBP12.88□□□□□ -0.35
BEST3-209ENST00000548658 NRBP2Q9NSY0 501 aa12.88□□□□□ -0.35
BEST3-209ENST00000548658 THEGQ9P2T0 379 aa12.88□□□□□ -0.35
BEST3-209ENST00000548658 TRPV2Q9Y5S1 764 aa12.88□□□□□ -0.35
BEST3-209ENST00000548658 MTCH2Q9Y6C9 303 aa12.88□□□□□ -0.35
BEST3-209ENST00000548658 PRUNE2Q8WUY3 3088 aa12.88□□□□□ -0.35
BEST3-209ENST00000548658 MICAL3Q7RTP6 2002 aa12.88□□□□□ -0.35
BEST3-209ENST00000548658 KDM3AQ9Y4C1 1321 aa12.88□□□□□ -0.35
BEST3-209ENST00000548658 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.87□□□□□ -0.35
BEST3-209ENST00000548658 M0R2N6 131 aa12.87□□□□□ -0.35
BEST3-209ENST00000548658 ENPP3O14638 875 aa12.87□□□□□ -0.35
BEST3-209ENST00000548658 ADAMTS3O15072 1205 aa12.87□□□□□ -0.35
BEST3-209ENST00000548658 MSH4O15457 936 aa12.87□□□□□ -0.35
BEST3-209ENST00000548658 MAGEB2O15479 319 aa12.87□□□□□ -0.35
BEST3-209ENST00000548658 GAS7O60861 476 aa12.87□□□□□ -0.35
BEST3-209ENST00000548658 UPP2O95045 317 aa12.87□□□□□ -0.35
BEST3-209ENST00000548658 JAK3P52333 1124 aa12.87□□□□□ -0.35
BEST3-209ENST00000548658 TJAP1Q5JTD0 557 aa12.87□□□□□ -0.35
BEST3-209ENST00000548658 LRCH2Q5VUJ6 765 aa12.87□□□□□ -0.35
BEST3-209ENST00000548658 RDM1Q8NG50 284 aa12.87□□□□□ -0.35
BEST3-209ENST00000548658 SP7Q8TDD2 431 aaPredicted RBP12.87□□□□□ -0.35
BEST3-209ENST00000548658 SLC5A5Q92911 643 aa12.87□□□□□ -0.35
BEST3-209ENST00000548658 NAP1L4Q99733 375 aaKnown RBP12.87□□□□□ -0.35
BEST3-209ENST00000548658 TEKT3Q9BXF9 490 aa12.87□□□□□ -0.35
BEST3-209ENST00000548658 COL25A1Q9BXS0 654 aaPredicted RBP12.87□□□□□ -0.35
BEST3-209ENST00000548658 SUGCTQ9HAC7 445 aa12.87□□□□□ -0.35
BEST3-209ENST00000548658 DISC1Q9NRI5 854 aa12.87□□□□□ -0.35
BEST3-209ENST00000548658 GABBR1Q9UBS5 961 aa12.87□□□□□ -0.35
BEST3-209ENST00000548658 TPCN1Q9ULQ1 816 aa12.87□□□□□ -0.35
BEST3-209ENST00000548658 IGSF9BQ9UPX0 1349 aa12.87□□□□□ -0.35
BEST3-209ENST00000548658 CHD7Q9P2D1 2997 aa12.86□□□□□ -0.35
BEST3-209ENST00000548658 CCDC194A0A1B0GVG4 234 aa12.86□□□□□ -0.35
BEST3-209ENST00000548658 RFXAPO00287 272 aa12.86□□□□□ -0.35
BEST3-209ENST00000548658 ARHGEF15O94989 841 aa12.86□□□□□ -0.35
BEST3-209ENST00000548658 TMOD1P28289 359 aa12.86□□□□□ -0.35
BEST3-209ENST00000548658 AK2P54819 239 aa12.86□□□□□ -0.35
BEST3-209ENST00000548658 MRPS5P82675 430 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms