RNA–Protein interactions for RNA: ENST00000548126.1

CCDC59-203, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 984 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-203ENST00000548126 ATRNL1Q5VV63 1379 aa8.37□□□□□ -1.07
CCDC59-203ENST00000548126 UTYO14607 1347 aa8.37□□□□□ -1.07
CCDC59-203ENST00000548126 GRXCR1A8MXD5 290 aa8.37□□□□□ -1.07
CCDC59-203ENST00000548126 ZNF862O60290 1169 aa8.37□□□□□ -1.07
CCDC59-203ENST00000548126 CLTBP09497 229 aa8.37□□□□□ -1.07
CCDC59-203ENST00000548126 SERPINB4P48594 390 aa8.37□□□□□ -1.07
CCDC59-203ENST00000548126 SPP2Q13103 211 aa8.37□□□□□ -1.07
CCDC59-203ENST00000548126 KCNMB1Q16558 191 aa8.37□□□□□ -1.07
CCDC59-203ENST00000548126 DTHD1Q6ZMT9 781 aa8.37□□□□□ -1.07
CCDC59-203ENST00000548126 GPR142Q7Z601 462 aa8.37□□□□□ -1.07
CCDC59-203ENST00000548126 PLEKHH3Q7Z736 793 aa8.37□□□□□ -1.07
CCDC59-203ENST00000548126 ZSWIM9Q86XI8 627 aa8.37□□□□□ -1.07
CCDC59-203ENST00000548126 VPS37DQ86XT2 251 aa8.37□□□□□ -1.07
CCDC59-203ENST00000548126 CCAR1Q8IX12 1150 aaKnown RBP8.37□□□□□ -1.07
CCDC59-203ENST00000548126 KCNB2Q92953 911 aa8.37□□□□□ -1.07
CCDC59-203ENST00000548126 EDC3Q96F86 508 aaKnown RBP8.37□□□□□ -1.07
CCDC59-203ENST00000548126 UIMC1Q96RL1 719 aa8.37□□□□□ -1.07
CCDC59-203ENST00000548126 TXNRD2Q9NNW7 524 aa8.37□□□□□ -1.07
CCDC59-203ENST00000548126 CNNM1Q9NRU3 951 aa8.37□□□□□ -1.07
CCDC59-203ENST00000548126 MSRAQ9UJ68 235 aa8.37□□□□□ -1.07
CCDC59-203ENST00000548126 COG5Q9UP83 839 aa8.37□□□□□ -1.07
CCDC59-203ENST00000548126 PRRC2BQ5JSZ5 2229 aaKnown RBP8.37□□□□□ -1.07
CCDC59-203ENST00000548126 DOCK1Q14185 1865 aa8.36□□□□□ -1.07
CCDC59-203ENST00000548126 ELL2O00472 640 aaPredicted RBP8.36□□□□□ -1.07
CCDC59-203ENST00000548126 PEX10O60683 326 aa8.36□□□□□ -1.07
CCDC59-203ENST00000548126 ITIH2P19823 946 aa8.36□□□□□ -1.07
CCDC59-203ENST00000548126 ADCYAP1R1P41586 468 aa8.36□□□□□ -1.07
CCDC59-203ENST00000548126 HMGCS2P54868 508 aa8.36□□□□□ -1.07
CCDC59-203ENST00000548126 RAB30Q15771 203 aa8.36□□□□□ -1.07
CCDC59-203ENST00000548126 RASIP1Q5U651 963 aa8.36□□□□□ -1.07
CCDC59-203ENST00000548126 SPOCD1Q6ZMY3 1216 aa8.36□□□□□ -1.07
CCDC59-203ENST00000548126 CCDC84Q86UT8 332 aaPredicted RBP8.36□□□□□ -1.07
CCDC59-203ENST00000548126 TOP6BLQ8N6T0 577 aa8.36□□□□□ -1.07
CCDC59-203ENST00000548126 PPP1R16BQ96T49 567 aa8.36□□□□□ -1.07
CCDC59-203ENST00000548126 FAM129BQ96TA1 746 aa8.36□□□□□ -1.07
CCDC59-203ENST00000548126 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.36□□□□□ -1.078e-8■■■■■ 37.7
CCDC59-203ENST00000548126 CHMP4AQ9BY43 222 aa8.36□□□□□ -1.07
CCDC59-203ENST00000548126 USP40Q9NVE5 1235 aa8.36□□□□□ -1.07
CCDC59-203ENST00000548126 FLRT1Q9NZU1 646 aa8.36□□□□□ -1.07
CCDC59-203ENST00000548126 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.36□□□□□ -1.07
CCDC59-203ENST00000548126 RBPJLQ9UBG7 517 aa8.36□□□□□ -1.07
CCDC59-203ENST00000548126 PCDHGC5Q9Y5F6 944 aa8.36□□□□□ -1.07
CCDC59-203ENST00000548126 LOC285556D6RIA3 1793 aa8.35□□□□□ -1.07
CCDC59-203ENST00000548126 EIF1AYO14602 144 aaKnown RBP8.35□□□□□ -1.07
CCDC59-203ENST00000548126 LEFTY1O75610 366 aa8.35□□□□□ -1.07
CCDC59-203ENST00000548126 HOXA7P31268 230 aaPredicted RBP8.35□□□□□ -1.07
CCDC59-203ENST00000548126 CD96P40200 585 aa8.35□□□□□ -1.07
CCDC59-203ENST00000548126 IRX3P78415 501 aaPredicted RBP8.35□□□□□ -1.07
CCDC59-203ENST00000548126 FOXO4P98177 505 aa8.35□□□□□ -1.07
CCDC59-203ENST00000548126 ATP2B2Q01814 1243 aa8.35□□□□□ -1.07
CCDC59-203ENST00000548126 IKZF1Q13422 519 aa8.35□□□□□ -1.07
CCDC59-203ENST00000548126 CCDC57Q2TAC2 916 aa8.35□□□□□ -1.07
CCDC59-203ENST00000548126 TAF7LQ5H9L4 462 aa8.35□□□□□ -1.07
CCDC59-203ENST00000548126 CCDC30Q5VVM6 783 aa8.35□□□□□ -1.07
CCDC59-203ENST00000548126 CCDC174Q6PII3 467 aa8.35□□□□□ -1.07
CCDC59-203ENST00000548126 TRPV1Q8NER1 839 aa8.35□□□□□ -1.07
CCDC59-203ENST00000548126 FERMT2Q96AC1 680 aa8.35□□□□□ -1.07
CCDC59-203ENST00000548126 TOX2Q96NM4 488 aa8.35□□□□□ -1.07
CCDC59-203ENST00000548126 EMILIN2Q9BXX0 1053 aa8.35□□□□□ -1.07
CCDC59-203ENST00000548126 PORCNQ9H237 461 aa8.35□□□□□ -1.07
CCDC59-203ENST00000548126 TNKS2Q9H2K2 1166 aa8.35□□□□□ -1.07
CCDC59-203ENST00000548126 SLC28A3Q9HAS3 691 aa8.35□□□□□ -1.07
CCDC59-203ENST00000548126 CD320Q9NPF0 282 aa8.35□□□□□ -1.07
CCDC59-203ENST00000548126 LRRC37A2A6NM11 1700 aa8.34□□□□□ -1.07
CCDC59-203ENST00000548126 TRIOO75962 3097 aa8.34□□□□□ -1.07
CCDC59-203ENST00000548126 DOCK2Q92608 1830 aa8.34□□□□□ -1.07
CCDC59-203ENST00000548126 SOWAHDA6NJG2 315 aa8.34□□□□□ -1.07
CCDC59-203ENST00000548126 ENTPD3O75355 529 aa8.34□□□□□ -1.07
CCDC59-203ENST00000548126 GLRX3O76003 335 aaKnown RBP8.34□□□□□ -1.07
CCDC59-203ENST00000548126 POU3F3P20264 500 aaPredicted RBP8.34□□□□□ -1.07
CCDC59-203ENST00000548126 HERVK_113P62684 666 aa8.34□□□□□ -1.07
CCDC59-203ENST00000548126 ERVK-24P63145 666 aa8.34□□□□□ -1.07
CCDC59-203ENST00000548126 FAAP100Q0VG06 881 aa8.34□□□□□ -1.07
CCDC59-203ENST00000548126 CAVIN4Q5BKX8 364 aa8.34□□□□□ -1.07
CCDC59-203ENST00000548126 TMEM240Q5SV17 173 aa8.34□□□□□ -1.07
CCDC59-203ENST00000548126 C16orf59Q7L2K0 433 aa8.34□□□□□ -1.07
CCDC59-203ENST00000548126 ZSCAN29Q8IWY8 852 aaPredicted RBP8.34□□□□□ -1.07
CCDC59-203ENST00000548126 SLC44A5Q8NCS7 719 aa8.34□□□□□ -1.07
CCDC59-203ENST00000548126 RNF214Q8ND24 703 aa8.34□□□□□ -1.07
CCDC59-203ENST00000548126 NKX2-4Q9H2Z4 354 aa8.34□□□□□ -1.07
CCDC59-203ENST00000548126 MYH16Q9H6N6 1097 aa8.34□□□□□ -1.07
CCDC59-203ENST00000548126 CACNA1GO43497 2377 aa8.34□□□□□ -1.07
CCDC59-203ENST00000548126 TIMP1P01033 207 aa8.33□□□□□ -1.08
CCDC59-203ENST00000548126 HOXC6P09630 235 aa8.33□□□□□ -1.08
CCDC59-203ENST00000548126 CYBAP13498 195 aa8.33□□□□□ -1.08
CCDC59-203ENST00000548126 ALADP13716 330 aa8.33□□□□□ -1.08
CCDC59-203ENST00000548126 CYP2C19P33261 490 aa8.33□□□□□ -1.08
CCDC59-203ENST00000548126 RAP1GAPP47736 663 aa8.33□□□□□ -1.08
CCDC59-203ENST00000548126 RGS3P49796 1198 aa8.33□□□□□ -1.08
CCDC59-203ENST00000548126 GRM2Q14416 872 aa8.33□□□□□ -1.08
CCDC59-203ENST00000548126 LRRC41Q15345 812 aa8.33□□□□□ -1.08
CCDC59-203ENST00000548126 LMBR1LQ6UX01 489 aa8.33□□□□□ -1.08
CCDC59-203ENST00000548126 ZSCAN18Q8TBC5 510 aaPredicted RBP8.33□□□□□ -1.08
CCDC59-203ENST00000548126 ISL2Q96A47 359 aa8.33□□□□□ -1.08
CCDC59-203ENST00000548126 DMRTB1Q96MA1 342 aa8.33□□□□□ -1.08
CCDC59-203ENST00000548126 IDI2Q9BXS1 227 aa8.33□□□□□ -1.08
CCDC59-203ENST00000548126 CWC22Q9HCG8 908 aaKnown RBP8.33□□□□□ -1.08
CCDC59-203ENST00000548126 PLAGL2Q9UPG8 496 aa8.33□□□□□ -1.08
CCDC59-203ENST00000548126 ZNF318Q5VUA4 2279 aa8.33□□□□□ -1.08
CCDC59-203ENST00000548126 PTPRZ1P23471 2315 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms