RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 IPO5O00410 1097 aaKnown RBP15.18■□□□□ 0.02
CPSF6-204ENST00000547486 IFNAR1P17181 557 aa15.18■□□□□ 0.02
CPSF6-204ENST00000547486 KLRC1P26715 233 aa15.18■□□□□ 0.02
CPSF6-204ENST00000547486 CD52P31358 61 aa15.18■□□□□ 0.02
CPSF6-204ENST00000547486 AAK1Q2M2I8 961 aa15.18■□□□□ 0.02
CPSF6-204ENST00000547486 SWSAP1Q6NVH7 229 aa15.18■□□□□ 0.02
CPSF6-204ENST00000547486 TSHZ1Q6ZSZ6 1077 aa15.18■□□□□ 0.02
CPSF6-204ENST00000547486 CCDC60Q8IWA6 550 aaPredicted RBP15.18■□□□□ 0.02
CPSF6-204ENST00000547486 REXO1Q8N1G1 1221 aaKnown RBP15.18■□□□□ 0.02
CPSF6-204ENST00000547486 LINC01599Q8WXQ3 324 aa15.18■□□□□ 0.02
CPSF6-204ENST00000547486 IL17RAQ96F46 866 aa15.18■□□□□ 0.02
CPSF6-204ENST00000547486 BACH1O14867 736 aa15.17■□□□□ 0.02
CPSF6-204ENST00000547486 LINC00271P0C7V0 271 aa15.17■□□□□ 0.02
CPSF6-204ENST00000547486 SLC26A2P50443 739 aa15.17■□□□□ 0.02
CPSF6-204ENST00000547486 AKAP17AQ02040 695 aaKnown RBP15.17■□□□□ 0.02
CPSF6-204ENST00000547486 IER5Q5VY09 327 aa15.17■□□□□ 0.02
CPSF6-204ENST00000547486 TMEM192Q8IY95 271 aa15.17■□□□□ 0.02
CPSF6-204ENST00000547486 CRIPAKQ8N1N5 446 aa15.17■□□□□ 0.02
CPSF6-204ENST00000547486 IL27Q8NEV9 243 aa15.17■□□□□ 0.02
CPSF6-204ENST00000547486 CCDC12Q8WUD4 166 aaPredicted RBP15.17■□□□□ 0.02
CPSF6-204ENST00000547486 TNPO1Q92973 898 aaKnown RBP15.17■□□□□ 0.02
CPSF6-204ENST00000547486 ZNF577Q9BSK1 485 aa15.17■□□□□ 0.02
CPSF6-204ENST00000547486 RNF26Q9BY78 433 aaPredicted RBP15.17■□□□□ 0.02
CPSF6-204ENST00000547486 CELF4Q9BZC1 486 aaKnown RBP15.17■□□□□ 0.02
CPSF6-204ENST00000547486 VPS54Q9P1Q0 977 aa15.17■□□□□ 0.02
CPSF6-204ENST00000547486 MICAL3Q7RTP6 2002 aa15.17■□□□□ 0.02
CPSF6-204ENST00000547486 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.16■□□□□ 0.02
CPSF6-204ENST00000547486 SMIM35A0A1B0GVV1 85 aa15.16■□□□□ 0.02
CPSF6-204ENST00000547486 ZBTB42B2RXF5 422 aa15.16■□□□□ 0.02
CPSF6-204ENST00000547486 H3BNC9 293 aa15.16■□□□□ 0.02
CPSF6-204ENST00000547486 GNA11P29992 359 aa15.16■□□□□ 0.02
CPSF6-204ENST00000547486 CIITAP33076 1130 aa15.16■□□□□ 0.02
CPSF6-204ENST00000547486 GPM6BQ13491 265 aa15.16■□□□□ 0.02
CPSF6-204ENST00000547486 PRR16Q569H4 304 aa15.16■□□□□ 0.02
CPSF6-204ENST00000547486 MCTP2Q6DN12 878 aa15.16■□□□□ 0.02
CPSF6-204ENST00000547486 KIAA0319LQ8IZA0 1049 aa15.16■□□□□ 0.02
CPSF6-204ENST00000547486 ATP8B4Q8TF62 1192 aa15.16■□□□□ 0.02
CPSF6-204ENST00000547486 LENG9Q96B70 501 aa15.16■□□□□ 0.02
CPSF6-204ENST00000547486 ZNF689Q96CS4 500 aaPredicted RBP15.16■□□□□ 0.02
CPSF6-204ENST00000547486 CDHR5Q9HBB8 845 aa15.16■□□□□ 0.02
CPSF6-204ENST00000547486 RC3H2Q9HBD1 1191 aaKnown RBP15.16■□□□□ 0.02
CPSF6-204ENST00000547486 ZNF302Q9NR11 478 aa15.16■□□□□ 0.02
CPSF6-204ENST00000547486 PADI3Q9ULW8 664 aa15.16■□□□□ 0.02
CPSF6-204ENST00000547486 TRPV2Q9Y5S1 764 aa15.16■□□□□ 0.02
CPSF6-204ENST00000547486 EPB41L2O43491 1005 aaKnown RBP15.15■□□□□ 0.02
CPSF6-204ENST00000547486 HBP1O60381 514 aa15.15■□□□□ 0.02
CPSF6-204ENST00000547486 FAM160B1Q5W0V3 765 aa15.15■□□□□ 0.02
CPSF6-204ENST00000547486 MIS18BP1Q6P0N0 1132 aa15.15■□□□□ 0.02
CPSF6-204ENST00000547486 PDXDC2PQ6P474 469 aa15.15■□□□□ 0.02
CPSF6-204ENST00000547486 TRMT1LQ7Z2T5 733 aaKnown RBP15.15■□□□□ 0.02
CPSF6-204ENST00000547486 NME8Q8N427 588 aa15.15■□□□□ 0.02
CPSF6-204ENST00000547486 FIBCD1Q8N539 461 aa15.15■□□□□ 0.02
CPSF6-204ENST00000547486 MRPL38Q96DV4 380 aaKnown RBP15.15■□□□□ 0.02
CPSF6-204ENST00000547486 SAMD11Q96NU1 681 aa15.15■□□□□ 0.02
CPSF6-204ENST00000547486 UPF3BQ9BZI7 483 aaKnown RBP15.15■□□□□ 0.02
CPSF6-204ENST00000547486 TMX1Q9H3N1 280 aa15.15■□□□□ 0.02
CPSF6-204ENST00000547486 TBC1D22BQ9NU19 505 aa15.15■□□□□ 0.02
CPSF6-204ENST00000547486 MAFBQ9Y5Q3 323 aaPredicted RBP15.15■□□□□ 0.02
CPSF6-204ENST00000547486 CYP46A1Q9Y6A2 500 aa15.15■□□□□ 0.02
CPSF6-204ENST00000547486 SQORQ9Y6N5 450 aa15.15■□□□□ 0.02
CPSF6-204ENST00000547486 IGSF9BQ9UPX0 1349 aa15.15■□□□□ 0.02
CPSF6-204ENST00000547486 COL4A4P53420 1690 aaPredicted RBP15.14■□□□□ 0.01
CPSF6-204ENST00000547486 DGKIO75912 1065 aa15.14■□□□□ 0.01
CPSF6-204ENST00000547486 RPLP2P05387 115 aaKnown RBP15.14■□□□□ 0.01
CPSF6-204ENST00000547486 KRT76Q01546 638 aa15.14■□□□□ 0.01
CPSF6-204ENST00000547486 TMEM266Q2M3C6 531 aa15.14■□□□□ 0.01
CPSF6-204ENST00000547486 ZNF746Q6NUN9 644 aaPredicted RBP15.14■□□□□ 0.01
CPSF6-204ENST00000547486 GJA10Q969M2 543 aa15.14■□□□□ 0.01
CPSF6-204ENST00000547486 KDM3AQ9Y4C1 1321 aa15.14■□□□□ 0.01
CPSF6-204ENST00000547486 M0QZ92 97 aa15.13■□□□□ 0.01
CPSF6-204ENST00000547486 MSH4O15457 936 aa15.13■□□□□ 0.01
CPSF6-204ENST00000547486 BMPR1AP36894 532 aa15.13■□□□□ 0.01
CPSF6-204ENST00000547486 NLRP5P59047 1200 aa15.13■□□□□ 0.01
CPSF6-204ENST00000547486 SETQ01105 290 aaPredicted RBP15.13■□□□□ 0.01
CPSF6-204ENST00000547486 PAK2Q13177 524 aa15.13■□□□□ 0.01
CPSF6-204ENST00000547486 STK3Q13188 491 aa15.13■□□□□ 0.01
CPSF6-204ENST00000547486 ZNF484Q5JVG2 852 aa15.13■□□□□ 0.01
CPSF6-204ENST00000547486 CKAP2LQ8IYA6 745 aa15.13■□□□□ 0.01
CPSF6-204ENST00000547486 CCDC148Q8NFR7 591 aa15.13■□□□□ 0.01
CPSF6-204ENST00000547486 BICD2Q8TD16 824 aa15.13■□□□□ 0.01
CPSF6-204ENST00000547486 TMEM40Q8WWA1 233 aa15.13■□□□□ 0.01
CPSF6-204ENST00000547486 KAT6AQ92794 2004 aa15.13■□□□□ 0.01
CPSF6-204ENST00000547486 CLP1Q92989 425 aaKnown RBP15.13■□□□□ 0.01
CPSF6-204ENST00000547486 ZNF274Q96GC6 653 aaPredicted RBP15.13■□□□□ 0.01
CPSF6-204ENST00000547486 AIFM3Q96NN9 605 aa15.13■□□□□ 0.01
CPSF6-204ENST00000547486 TM6SF1Q9BZW5 370 aa15.13■□□□□ 0.01
CPSF6-204ENST00000547486 UBE2ZQ9H832 354 aaPredicted RBP15.13■□□□□ 0.01
CPSF6-204ENST00000547486 SH3GLB2Q9NR46 395 aa15.13■□□□□ 0.01
CPSF6-204ENST00000547486 GABBR1Q9UBS5 961 aa15.13■□□□□ 0.01
CPSF6-204ENST00000547486 GINS2Q9Y248 185 aa15.13■□□□□ 0.01
CPSF6-204ENST00000547486 NOC2LQ9Y3T9 749 aaKnown RBP15.13■□□□□ 0.01
CPSF6-204ENST00000547486 PCDHA10Q9Y5I2 948 aa15.13■□□□□ 0.01
CPSF6-204ENST00000547486 ADGRA3Q8IWK6 1321 aa15.13■□□□□ 0.01
CPSF6-204ENST00000547486 SIP14410 1827 aa15.13■□□□□ 0.01
CPSF6-204ENST00000547486 C5orf67F2Z3F1 127 aa15.12■□□□□ 0.01
CPSF6-204ENST00000547486 M0R2N6 131 aa15.12■□□□□ 0.01
CPSF6-204ENST00000547486 GRM6O15303 877 aa15.12■□□□□ 0.01
CPSF6-204ENST00000547486 MGEA5O60502 916 aa15.12■□□□□ 0.01
CPSF6-204ENST00000547486 DTNBO60941 627 aa15.12■□□□□ 0.01
CPSF6-204ENST00000547486 C22orf31O95567 290 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms