RNA–Protein interactions for RNA: ENST00000546723.5

RACGAP1-205, Transcript of Rac GTPase activating protein 1, human

TSL 2

Gene RACGAP1, Length 574 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-205	ENST00000546723	TXK	P42681	527 aa		11.43	□□□□□ -0.58
RACGAP1-205	ENST00000546723	PSMC5	P62195	406 aa		11.43	□□□□□ -0.58
RACGAP1-205	ENST00000546723	EPHA7	Q15375	998 aa		11.43	□□□□□ -0.58
RACGAP1-205	ENST00000546723	TRIM71	Q2Q1W2	868 aa	Known RBP	11.43	□□□□□ -0.58
RACGAP1-205	ENST00000546723	LRIT3	Q3SXY7	679 aa		11.43	□□□□□ -0.58
RACGAP1-205	ENST00000546723	XKR3	Q5GH77	459 aa		11.43	□□□□□ -0.58
RACGAP1-205	ENST00000546723	TTC38	Q5R3I4	469 aa		11.43	□□□□□ -0.58
RACGAP1-205	ENST00000546723	C9orf50	Q5SZB4	431 aa		11.43	□□□□□ -0.58
RACGAP1-205	ENST00000546723	MARCH8	Q5T0T0	291 aa		11.43	□□□□□ -0.58
RACGAP1-205	ENST00000546723	B3GNT9	Q6UX72	402 aa		11.43	□□□□□ -0.58
RACGAP1-205	ENST00000546723	C16orf59	Q7L2K0	433 aa		11.43	□□□□□ -0.58
RACGAP1-205	ENST00000546723	NME8	Q8N427	588 aa		11.43	□□□□□ -0.58
RACGAP1-205	ENST00000546723	TTC12	Q9H892	705 aa	Predicted RBP	11.43	□□□□□ -0.58
RACGAP1-205	ENST00000546723	PCDHA2	Q9Y5H9	948 aa		11.43	□□□□□ -0.58
RACGAP1-205	ENST00000546723	COL1A2	P08123	1366 aa		11.42	□□□□□ -0.58
RACGAP1-205	ENST00000546723	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.42	□□□□□ -0.58
RACGAP1-205	ENST00000546723	SMIM35	A0A1B0GVV1	85 aa		11.42	□□□□□ -0.58
RACGAP1-205	ENST00000546723	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.42	□□□□□ -0.58
RACGAP1-205	ENST00000546723	DDX11L8	A8MPP1	907 aa		11.42	□□□□□ -0.58
RACGAP1-205	ENST00000546723	KIF28P	B7ZC32	967 aa		11.42	□□□□□ -0.58
RACGAP1-205	ENST00000546723		M0QZ92	97 aa		11.42	□□□□□ -0.58
RACGAP1-205	ENST00000546723	MAGEB2	O15479	319 aa		11.42	□□□□□ -0.58
RACGAP1-205	ENST00000546723	OAT	P04181	439 aa		11.42	□□□□□ -0.58
RACGAP1-205	ENST00000546723	HSP90AA1	P07900	732 aa	Known RBP	11.42	□□□□□ -0.58
RACGAP1-205	ENST00000546723	RILPL1	Q5EBL4	403 aa		11.42	□□□□□ -0.58
RACGAP1-205	ENST00000546723	IER5	Q5VY09	327 aa		11.42	□□□□□ -0.58
RACGAP1-205	ENST00000546723	NCAPH2	Q6IBW4	605 aa		11.42	□□□□□ -0.58
RACGAP1-205	ENST00000546723	MTHFD1L	Q6UB35	978 aa		11.42	□□□□□ -0.58
RACGAP1-205	ENST00000546723	OTOP2	Q7RTS6	562 aa		11.42	□□□□□ -0.58
RACGAP1-205	ENST00000546723	RPAIN	Q86UA6	219 aa		11.42	□□□□□ -0.58
RACGAP1-205	ENST00000546723	DNAJB3	Q8WWF6	145 aa		11.42	□□□□□ -0.58
RACGAP1-205	ENST00000546723	HERVK_113	Q902F9	699 aa		11.42	□□□□□ -0.58
RACGAP1-205	ENST00000546723	MTMR9	Q96QG7	549 aa		11.42	□□□□□ -0.58
RACGAP1-205	ENST00000546723	ALPK3	Q96L96	1907 aa		11.41	□□□□□ -0.58
RACGAP1-205	ENST00000546723	ZBBX	A8MT70	800 aa		11.41	□□□□□ -0.58
RACGAP1-205	ENST00000546723	EML1	O00423	815 aa		11.41	□□□□□ -0.58
RACGAP1-205	ENST00000546723	ZNF862	O60290	1169 aa		11.41	□□□□□ -0.58
RACGAP1-205	ENST00000546723	TMOD1	P28289	359 aa		11.41	□□□□□ -0.58
RACGAP1-205	ENST00000546723	QARS	P47897	775 aa	Known RBP	11.41	□□□□□ -0.58
RACGAP1-205	ENST00000546723	PRKCE	Q02156	737 aa		11.41	□□□□□ -0.58
RACGAP1-205	ENST00000546723	TMEM266	Q2M3C6	531 aa		11.41	□□□□□ -0.58
RACGAP1-205	ENST00000546723	FAM26D	Q5JW98	314 aa		11.41	□□□□□ -0.58
RACGAP1-205	ENST00000546723	RUFY4	Q6ZNE9	571 aa		11.41	□□□□□ -0.58
RACGAP1-205	ENST00000546723	OTUD6A	Q7L8S5	288 aa		11.41	□□□□□ -0.58
RACGAP1-205	ENST00000546723	BANK1	Q8NDB2	785 aa		11.41	□□□□□ -0.58
RACGAP1-205	ENST00000546723	TRAPPC12	Q8WVT3	735 aa		11.41	□□□□□ -0.58
RACGAP1-205	ENST00000546723	WNT8B	Q93098	351 aa		11.41	□□□□□ -0.58
RACGAP1-205	ENST00000546723	FAM49A	Q9H0Q0	323 aa	Predicted RBP	11.41	□□□□□ -0.58
RACGAP1-205	ENST00000546723	FOXD4L1	Q9NU39	408 aa		11.41	□□□□□ -0.58
RACGAP1-205	ENST00000546723	VAV3	Q9UKW4	847 aa		11.41	□□□□□ -0.58
RACGAP1-205	ENST00000546723	SCN10A	Q9Y5Y9	1956 aa		11.41	□□□□□ -0.58
RACGAP1-205	ENST00000546723	PDE4DIP	Q5VU43	2346 aa		11.41	□□□□□ -0.58
RACGAP1-205	ENST00000546723	IGSF9B	Q9UPX0	1349 aa		11.4	□□□□□ -0.58
RACGAP1-205	ENST00000546723	VPS37C	A5D8V6	355 aa	Predicted RBP	11.4	□□□□□ -0.58
RACGAP1-205	ENST00000546723	WNT7A	O00755	349 aa		11.4	□□□□□ -0.58
RACGAP1-205	ENST00000546723	CXCL10	P02778	98 aa		11.4	□□□□□ -0.58
RACGAP1-205	ENST00000546723	CTSH	P09668	335 aa		11.4	□□□□□ -0.58
RACGAP1-205	ENST00000546723	OR52Z1	P0C646	297 aa		11.4	□□□□□ -0.58
RACGAP1-205	ENST00000546723	IKBKE	Q14164	716 aa		11.4	□□□□□ -0.58
RACGAP1-205	ENST00000546723	UGCG	Q16739	394 aa		11.4	□□□□□ -0.58
RACGAP1-205	ENST00000546723	CNKSR3	Q6P9H4	555 aa		11.4	□□□□□ -0.58
RACGAP1-205	ENST00000546723	TPH2	Q8IWU9	490 aa		11.4	□□□□□ -0.58
RACGAP1-205	ENST00000546723	C4orf19	Q8IY42	314 aa		11.4	□□□□□ -0.58
RACGAP1-205	ENST00000546723	EXOC8	Q8IYI6	725 aa		11.4	□□□□□ -0.58
RACGAP1-205	ENST00000546723	METTL13	Q8N6R0	699 aa		11.4	□□□□□ -0.58
RACGAP1-205	ENST00000546723	DYDC2	Q96IM9	177 aa		11.4	□□□□□ -0.58
RACGAP1-205	ENST00000546723	NIFK	Q9BYG3	293 aa	Known RBP	11.4	□□□□□ -0.58
RACGAP1-205	ENST00000546723	TMEM60	Q9H2L4	133 aa		11.4	□□□□□ -0.58
RACGAP1-205	ENST00000546723	ZSWIM4	Q9H7M6	989 aa		11.4	□□□□□ -0.58
RACGAP1-205	ENST00000546723	SLC4A7	Q9Y6M7	1214 aa		11.4	□□□□□ -0.58
RACGAP1-205	ENST00000546723	ABHD14A-ACY1	A0A1B0GW23	586 aa		11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	LAD1	O00515	517 aa		11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	NBN	O60934	754 aa		11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	EFCAB14	O75071	495 aa		11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	BAIAP3	O94812	1187 aa		11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	SLITRK3	O94933	977 aa		11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	PDIA4	P13667	645 aa	Known RBP	11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	TEC	P42680	631 aa		11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	DNM2	P50570	870 aa		11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	TOB1	P50616	345 aa	Predicted RBP	11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	FXR1	P51114	621 aa	Known RBP eCLIP	11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	MRPS6	P82932	125 aa	Known RBP	11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	SMAD3	P84022	425 aa	Known RBP	11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	TBC1D8B	Q0IIM8	1120 aa		11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	PTGDR	Q13258	359 aa		11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	MTERF2	Q49AM1	385 aa		11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	EFCAB12	Q6NXP0	572 aa		11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	TRAF7	Q6Q0C0	670 aa		11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	BRAP	Q7Z569	592 aa		11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	ZNF710	Q8N1W2	664 aa		11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	DBF4B	Q8NFT6	615 aa		11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	ERMN	Q8TAM6	284 aa		11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	NEK9	Q8TD19	979 aa		11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	SEPT8	Q92599	483 aa		11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	ZBTB10	Q96DT7	871 aa		11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	JPH2	Q9BR39	696 aa	Predicted RBP	11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	CELF4	Q9BZC1	486 aa	Known RBP	11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	RAB34	Q9BZG1	259 aa		11.39	□□□□□ -0.59
RACGAP1-205	ENST00000546723	SUGCT	Q9HAC7	445 aa		11.39	□□□□□ -0.59

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