RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 ATP4AP20648 1035 aa21.27■■□□□ 1
CHERP-204ENST00000546538 KCNA5P22460 613 aa21.27■■□□□ 1
CHERP-204ENST00000546538 METAP2P50579 478 aaKnown RBP eCLIP21.27■■□□□ 14e-6■□□□□ 8.6
CHERP-204ENST00000546538 COL19A1Q14993 1142 aa21.27■■□□□ 1
CHERP-204ENST00000546538 RSPH3Q86UC2 560 aa21.27■■□□□ 1
CHERP-204ENST00000546538 AGXT2Q9BYV1 514 aa21.27■■□□□ 1
CHERP-204ENST00000546538 AZI2Q9H6S1 392 aa21.27■■□□□ 1
CHERP-204ENST00000546538 ADGRA3Q8IWK6 1321 aa21.27■□□□□ 0.99
CHERP-204ENST00000546538 KIAA1671Q9BY89 1806 aa21.26■□□□□ 0.99
CHERP-204ENST00000546538 C5orf67F2Z3F1 127 aa21.26■□□□□ 0.99
CHERP-204ENST00000546538 HMGB1P09429 215 aaKnown RBP21.26■□□□□ 0.99
CHERP-204ENST00000546538 NTRK3Q16288 839 aa21.26■□□□□ 0.99
CHERP-204ENST00000546538 LEXMQ3ZCV2 418 aa21.26■□□□□ 0.99
CHERP-204ENST00000546538 TCEAL5Q5H9L2 206 aa21.26■□□□□ 0.99
CHERP-204ENST00000546538 NIPA1Q7RTP0 329 aa21.26■□□□□ 0.99
CHERP-204ENST00000546538 ZMYND12Q9H0C1 365 aa21.26■□□□□ 0.99
CHERP-204ENST00000546538 TMX1Q9H3N1 280 aa21.26■□□□□ 0.99
CHERP-204ENST00000546538 NAP1L2Q9ULW6 460 aaPredicted RBP21.26■□□□□ 0.99
CHERP-204ENST00000546538 IGSF9BQ9UPX0 1349 aa21.26■□□□□ 0.99
CHERP-204ENST00000546538 ESYT2A0FGR8 921 aa21.25■□□□□ 0.99
CHERP-204ENST00000546538 POTEB3A0JP26 581 aa21.25■□□□□ 0.99
CHERP-204ENST00000546538 GRM6O15303 877 aa21.25■□□□□ 0.99
CHERP-204ENST00000546538 DGKIO75912 1065 aa21.25■□□□□ 0.99
CHERP-204ENST00000546538 CYP3A4P08684 503 aa21.25■□□□□ 0.99
CHERP-204ENST00000546538 POTEBQ6S5H4 581 aa21.25■□□□□ 0.99
CHERP-204ENST00000546538 MTHFD1LQ6UB35 978 aa21.25■□□□□ 0.99
CHERP-204ENST00000546538 PLA2G4DQ86XP0 818 aa21.25■□□□□ 0.99
CHERP-204ENST00000546538 FBXL16Q8N461 479 aa21.25■□□□□ 0.99
CHERP-204ENST00000546538 FIBCD1Q8N539 461 aa21.25■□□□□ 0.99
CHERP-204ENST00000546538 BANK1Q8NDB2 785 aa21.25■□□□□ 0.99
CHERP-204ENST00000546538 RASGRP4Q8TDF6 673 aa21.25■□□□□ 0.99
CHERP-204ENST00000546538 CLP1Q92989 425 aaKnown RBP21.25■□□□□ 0.99
CHERP-204ENST00000546538 PHKBQ93100 1093 aa21.25■□□□□ 0.99
CHERP-204ENST00000546538 CDHR5Q9HBB8 845 aa21.25■□□□□ 0.99
CHERP-204ENST00000546538 PADI3Q9ULW8 664 aa21.25■□□□□ 0.99
CHERP-204ENST00000546538 TRPV2Q9Y5S1 764 aa21.25■□□□□ 0.99
CHERP-204ENST00000546538 IL9P15248 144 aa21.24■□□□□ 0.99
CHERP-204ENST00000546538 CTNNB1P35222 781 aa21.24■□□□□ 0.99
CHERP-204ENST00000546538 NEK9Q8TD19 979 aa21.24■□□□□ 0.99
CHERP-204ENST00000546538 SMIM35A0A1B0GVV1 85 aa21.23■□□□□ 0.99
CHERP-204ENST00000546538 PRPF3O43395 683 aaKnown RBP21.23■□□□□ 0.99
CHERP-204ENST00000546538 RPS6KB1P23443 525 aa21.23■□□□□ 0.99
CHERP-204ENST00000546538 BMPR1AP36894 532 aa21.23■□□□□ 0.99
CHERP-204ENST00000546538 CAMK1Q14012 370 aa21.23■□□□□ 0.99
CHERP-204ENST00000546538 PTPROQ16827 1216 aa21.23■□□□□ 0.99
CHERP-204ENST00000546538 TMEM266Q2M3C6 531 aa21.23■□□□□ 0.99
CHERP-204ENST00000546538 IER5Q5VY09 327 aa21.23■□□□□ 0.99
CHERP-204ENST00000546538 ATP8B4Q8TF62 1192 aa21.23■□□□□ 0.99
CHERP-204ENST00000546538 TMEM40Q8WWA1 233 aa21.23■□□□□ 0.99
CHERP-204ENST00000546538 LENG9Q96B70 501 aa21.23■□□□□ 0.99
CHERP-204ENST00000546538 CELF4Q9BZC1 486 aaKnown RBP21.23■□□□□ 0.99
CHERP-204ENST00000546538 GLT8D2Q9H1C3 349 aa21.23■□□□□ 0.99
CHERP-204ENST00000546538 C11orf16Q9NQ32 467 aa21.23■□□□□ 0.99
CHERP-204ENST00000546538 SQORQ9Y6N5 450 aa21.23■□□□□ 0.99
CHERP-204ENST00000546538 KDM3AQ9Y4C1 1321 aa21.23■□□□□ 0.99
CHERP-204ENST00000546538 EVPLQ92817 2033 aa21.23■□□□□ 0.99
CHERP-204ENST00000546538 H3BQ06 376 aaPredicted RBP21.22■□□□□ 0.99
CHERP-204ENST00000546538 IPO5O00410 1097 aaKnown RBP21.22■□□□□ 0.99
CHERP-204ENST00000546538 KLRC1P26715 233 aa21.22■□□□□ 0.99
CHERP-204ENST00000546538 ZNF76P36508 570 aa21.22■□□□□ 0.99
CHERP-204ENST00000546538 GATMP50440 423 aa21.22■□□□□ 0.99
CHERP-204ENST00000546538 TIGD5Q53EQ6 642 aa21.22■□□□□ 0.99
CHERP-204ENST00000546538 KIAA0319LQ8IZA0 1049 aa21.22■□□□□ 0.99
CHERP-204ENST00000546538 MRPL42Q9Y6G3 142 aaKnown RBP21.22■□□□□ 0.99
CHERP-204ENST00000546538 TRIOO75962 3097 aa21.22■□□□□ 0.99
CHERP-204ENST00000546538 WDR81Q562E7 1941 aa21.22■□□□□ 0.99
CHERP-204ENST00000546538 MGEA5O60502 916 aa21.21■□□□□ 0.99
CHERP-204ENST00000546538 LTBRP36941 435 aa21.21■□□□□ 0.99
CHERP-204ENST00000546538 SLC26A2P50443 739 aa21.21■□□□□ 0.99
CHERP-204ENST00000546538 SWSAP1Q6NVH7 229 aa21.21■□□□□ 0.99
CHERP-204ENST00000546538 BLOC1S2Q6QNY1 142 aa21.21■□□□□ 0.99
CHERP-204ENST00000546538 FAM178BQ8IXR5 827 aa21.21■□□□□ 0.99
CHERP-204ENST00000546538 NSUN3Q9H649 340 aaKnown RBP21.21■□□□□ 0.99
CHERP-204ENST00000546538 NCOA5Q9HCD5 579 aaKnown RBP21.21■□□□□ 0.99
CHERP-204ENST00000546538 CCDC196A0A1B0GTZ2 297 aa21.21■□□□□ 0.99
CHERP-204ENST00000546538 BACH1O14867 736 aa21.21■□□□□ 0.99
CHERP-204ENST00000546538 DNAJB1P25685 340 aa21.21■□□□□ 0.99
CHERP-204ENST00000546538 EVCP57679 992 aa21.21■□□□□ 0.99
CHERP-204ENST00000546538 FGD1P98174 961 aa21.21■□□□□ 0.99
CHERP-204ENST00000546538 KRT76Q01546 638 aa21.21■□□□□ 0.99
CHERP-204ENST00000546538 BTG3Q14201 252 aaPredicted RBP21.21■□□□□ 0.99
CHERP-204ENST00000546538 REXO1Q8N1G1 1221 aaKnown RBP21.21■□□□□ 0.99
CHERP-204ENST00000546538 PABPC5Q96DU9 382 aaKnown RBP21.21■□□□□ 0.99
CHERP-204ENST00000546538 ZNF302Q9NR11 478 aa21.21■□□□□ 0.99
CHERP-204ENST00000546538 NOC2LQ9Y3T9 749 aaKnown RBP21.21■□□□□ 0.99
CHERP-204ENST00000546538 MAFBQ9Y5Q3 323 aaPredicted RBP21.21■□□□□ 0.99
CHERP-204ENST00000546538 GRXCR2A6NFK2 248 aa21.2■□□□□ 0.98
CHERP-204ENST00000546538 HBP1O60381 514 aa21.2■□□□□ 0.98
CHERP-204ENST00000546538 C22orf31O95567 290 aa21.2■□□□□ 0.98
CHERP-204ENST00000546538 RPLP2P05387 115 aaKnown RBP21.2■□□□□ 0.98
CHERP-204ENST00000546538 RB1P06400 928 aa21.2■□□□□ 0.98
CHERP-204ENST00000546538 PDIA3P30101 505 aaKnown RBP21.2■□□□□ 0.98
CHERP-204ENST00000546538 PAK2Q13177 524 aa21.2■□□□□ 0.98
CHERP-204ENST00000546538 PTCRAQ6ISU1 281 aaPredicted RBP21.2■□□□□ 0.98
CHERP-204ENST00000546538 PDXDC2PQ6P474 469 aa21.2■□□□□ 0.98
CHERP-204ENST00000546538 ZNF577Q9BSK1 485 aa21.2■□□□□ 0.98
CHERP-204ENST00000546538 ERVK-5Q9HDB9 667 aa21.2■□□□□ 0.98
CHERP-204ENST00000546538 CIITAP33076 1130 aa21.19■□□□□ 0.98
CHERP-204ENST00000546538 GTF2F1P35269 517 aaKnown RBP eCLIP21.19■□□□□ 0.982e-8■■■■■ 34.1
CHERP-204ENST00000546538 DLX2Q07687 328 aaPredicted RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms