RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 KATNAL1Q9BW62 490 aa8.42□□□□□ -1.06
CPSF7-224ENST00000544990 SLC26A6Q9BXS9 759 aa8.42□□□□□ -1.06
CPSF7-224ENST00000544990 ZMYND12Q9H0C1 365 aa8.42□□□□□ -1.06
CPSF7-224ENST00000544990 SLKQ9H2G2 1235 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-224ENST00000544990 LTBP2Q14767 1821 aa8.42□□□□□ -1.06
CPSF7-224ENST00000544990 SCN10AQ9Y5Y9 1956 aa8.42□□□□□ -1.06
CPSF7-224ENST00000544990 GRIN2DO15399 1336 aa8.41□□□□□ -1.06
CPSF7-224ENST00000544990 NOP56O00567 594 aaKnown RBP8.41□□□□□ -1.06
CPSF7-224ENST00000544990 CDKL5O76039 1030 aa8.41□□□□□ -1.06
CPSF7-224ENST00000544990 DEXIO95424 95 aa8.41□□□□□ -1.06
CPSF7-224ENST00000544990 UBA1P22314 1058 aaKnown RBP8.41□□□□□ -1.06
CPSF7-224ENST00000544990 ZNF76P36508 570 aa8.41□□□□□ -1.06
CPSF7-224ENST00000544990 CHMP4BP1P59074 171 aa8.41□□□□□ -1.06
CPSF7-224ENST00000544990 SP2Q02086 613 aa8.41□□□□□ -1.06
CPSF7-224ENST00000544990 FPGSQ05932 587 aa8.41□□□□□ -1.06
CPSF7-224ENST00000544990 STK3Q13188 491 aa8.41□□□□□ -1.06
CPSF7-224ENST00000544990 PKN1Q16512 942 aa8.41□□□□□ -1.06
CPSF7-224ENST00000544990 HSDL1Q3SXM5 330 aa8.41□□□□□ -1.06
CPSF7-224ENST00000544990 MFSD5Q6N075 450 aa8.41□□□□□ -1.06
CPSF7-224ENST00000544990 METTL7BQ6UX53 244 aa8.41□□□□□ -1.06
CPSF7-224ENST00000544990 CYFIP1Q7L576 1253 aa8.41□□□□□ -1.06
CPSF7-224ENST00000544990 TRIM50Q86XT4 487 aa8.41□□□□□ -1.06
CPSF7-224ENST00000544990 DEPDC4Q8N2C3 294 aa8.41□□□□□ -1.06
CPSF7-224ENST00000544990 PHTF2Q8N3S3 785 aa8.41□□□□□ -1.06
CPSF7-224ENST00000544990 TMEM199Q8N511 208 aa8.41□□□□□ -1.06
CPSF7-224ENST00000544990 IL17RAQ96F46 866 aa8.41□□□□□ -1.06
CPSF7-224ENST00000544990 ANO3Q9BYT9 981 aa8.41□□□□□ -1.06
CPSF7-224ENST00000544990 NCOA5Q9HCD5 579 aaKnown RBP8.41□□□□□ -1.06
CPSF7-224ENST00000544990 SH3GLB2Q9NR46 395 aa8.41□□□□□ -1.06
CPSF7-224ENST00000544990 TBX21Q9UL17 535 aa8.41□□□□□ -1.06
CPSF7-224ENST00000544990 DOLKQ9UPQ8 538 aa8.41□□□□□ -1.06
CPSF7-224ENST00000544990 NOD1Q9Y239 953 aa8.41□□□□□ -1.06
CPSF7-224ENST00000544990 DOCK5Q9H7D0 1870 aa8.4□□□□□ -1.06
CPSF7-224ENST00000544990 SORBS3O60504 671 aa8.4□□□□□ -1.06
CPSF7-224ENST00000544990 B4GALT4O60513 344 aa8.4□□□□□ -1.06
CPSF7-224ENST00000544990 PFKFB2O60825 505 aa8.4□□□□□ -1.06
CPSF7-224ENST00000544990 NEK4P51957 841 aa8.4□□□□□ -1.06
CPSF7-224ENST00000544990 AK2P54819 239 aa8.4□□□□□ -1.06
CPSF7-224ENST00000544990 NLRP5P59047 1200 aa8.4□□□□□ -1.06
CPSF7-224ENST00000544990 PPIGQ13427 754 aaKnown RBP eCLIP8.4□□□□□ -1.067e-8■■■□□ 16.3
CPSF7-224ENST00000544990 MTMR1Q13613 665 aa8.4□□□□□ -1.06
CPSF7-224ENST00000544990 NCOA4Q13772 614 aa8.4□□□□□ -1.06
CPSF7-224ENST00000544990 JAKMIP3Q5VZ66 844 aa8.4□□□□□ -1.06
CPSF7-224ENST00000544990 FAM177A1Q8N128 213 aaPredicted RBP8.4□□□□□ -1.06
CPSF7-224ENST00000544990 REXO1Q8N1G1 1221 aaKnown RBP8.4□□□□□ -1.06
CPSF7-224ENST00000544990 C7orf31Q8N865 590 aa8.4□□□□□ -1.06
CPSF7-224ENST00000544990 EHBP1Q8NDI1 1231 aa8.4□□□□□ -1.06
CPSF7-224ENST00000544990 PGBD1Q96JS3 809 aa8.4□□□□□ -1.06
CPSF7-224ENST00000544990 MXRA8Q9BRK3 442 aa8.4□□□□□ -1.06
CPSF7-224ENST00000544990 ALG1Q9BT22 464 aa8.4□□□□□ -1.06
CPSF7-224ENST00000544990 TRPV6Q9H1D0 765 aa8.4□□□□□ -1.06
CPSF7-224ENST00000544990 HIPK3Q9H422 1215 aa8.4□□□□□ -1.06
CPSF7-224ENST00000544990 JADE2Q9NQC1 790 aa8.4□□□□□ -1.06
CPSF7-224ENST00000544990 RBM19Q9Y4C8 960 aaKnown RBP8.4□□□□□ -1.06
CPSF7-224ENST00000544990 UBIAD1Q9Y5Z9 338 aa8.4□□□□□ -1.06
CPSF7-224ENST00000544990 KAT6AQ92794 2004 aa8.39□□□□□ -1.07
CPSF7-224ENST00000544990 H3BRB1 525 aa8.39□□□□□ -1.07
CPSF7-224ENST00000544990 PPFIA3O75145 1194 aa8.39□□□□□ -1.07
CPSF7-224ENST00000544990 F2P00734 622 aa8.39□□□□□ -1.07
CPSF7-224ENST00000544990 ZNF286BP0CG31 522 aa8.39□□□□□ -1.07
CPSF7-224ENST00000544990 HOXD8P13378 290 aaPredicted RBP8.39□□□□□ -1.07
CPSF7-224ENST00000544990 XBP1P17861 261 aa8.39□□□□□ -1.07
CPSF7-224ENST00000544990 ITGB5P18084 799 aa8.39□□□□□ -1.07
CPSF7-224ENST00000544990 ITGB8P26012 769 aa8.39□□□□□ -1.07
CPSF7-224ENST00000544990 SREBF1P36956 1147 aa8.39□□□□□ -1.07
CPSF7-224ENST00000544990 FXR1P51114 621 aaKnown RBP eCLIP8.39□□□□□ -1.07
CPSF7-224ENST00000544990 SCRN1Q12765 414 aa8.39□□□□□ -1.07
CPSF7-224ENST00000544990 PTGISQ16647 500 aa8.39□□□□□ -1.07
CPSF7-224ENST00000544990 KIAA0753Q2KHM9 967 aa8.39□□□□□ -1.07
CPSF7-224ENST00000544990 LRIT3Q3SXY7 679 aa8.39□□□□□ -1.07
CPSF7-224ENST00000544990 C8orf34Q49A92 452 aa8.39□□□□□ -1.07
CPSF7-224ENST00000544990 CEP55Q53EZ4 464 aa8.39□□□□□ -1.07
CPSF7-224ENST00000544990 SESTD1Q86VW0 696 aa8.39□□□□□ -1.07
CPSF7-224ENST00000544990 RPUSD2Q8IZ73 545 aaKnown RBP8.39□□□□□ -1.07
CPSF7-224ENST00000544990 KAT2BQ92831 832 aa8.39□□□□□ -1.07
CPSF7-224ENST00000544990 SDF4Q9BRK5 362 aa8.39□□□□□ -1.07
CPSF7-224ENST00000544990 C1QTNF2Q9BXJ5 285 aa8.39□□□□□ -1.07
CPSF7-224ENST00000544990 C22orf23Q9BZE7 217 aa8.39□□□□□ -1.07
CPSF7-224ENST00000544990 TUT1Q9H6E5 874 aaKnown RBP8.39□□□□□ -1.07
CPSF7-224ENST00000544990 UPF2Q9HAU5 1272 aaKnown RBP8.39□□□□□ -1.07
CPSF7-224ENST00000544990 TRMT13Q9NUP7 481 aaKnown RBP8.39□□□□□ -1.07
CPSF7-224ENST00000544990 TMEM260Q9NX78 707 aa8.39□□□□□ -1.07
CPSF7-224ENST00000544990 VPS54Q9P1Q0 977 aa8.39□□□□□ -1.07
CPSF7-224ENST00000544990 ZNF215Q9UL58 517 aaPredicted RBP8.39□□□□□ -1.07
CPSF7-224ENST00000544990 TPCN1Q9ULQ1 816 aa8.39□□□□□ -1.07
CPSF7-224ENST00000544990 TRIOBPQ9H2D6 2365 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 HAS3O00219 553 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 ATP9AO75110 1047 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 LGALS2P05162 132 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 CYP3A4P08684 503 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 KCNA2P16389 499 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 CYP2C18P33260 490 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 ATP1A2P50993 1020 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 ARHGAP4P98171 946 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 SP4Q02446 784 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 BFSP2Q13515 415 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 SHHQ15465 462 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 C4orf48Q5BLP8 95 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 GALNT17Q6IS24 598 aa8.38□□□□□ -1.07
CPSF7-224ENST00000544990 VASH1Q7L8A9 365 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms