RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 ADCY1Q08828 1119 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 SMAD4Q13485 552 aaKnown RBP3.32□□□□□ -1.88
YBX3-214ENST00000544501 LRRC32Q14392 662 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 EPHA7Q15375 998 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 ZNF662Q6ZS27 426 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 FKBP9P1Q75LS8 142 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 FILIP1Q7Z7B0 1213 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 C1QL4Q86Z23 238 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 FAM177A1Q8N128 213 aaPredicted RBP3.32□□□□□ -1.88
YBX3-214ENST00000544501 AFAP1L2Q8N4X5 818 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 CHTF18Q8WVB6 975 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 USP7Q93009 1102 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 C16orf92Q96LL3 132 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 GBP4Q96PP9 640 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 ELF4Q99607 663 aaPredicted RBP3.32□□□□□ -1.88
YBX3-214ENST00000544501 TTC1Q99614 292 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 SYT3Q9BQG1 590 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 BTBD2Q9BX70 525 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 IRF2BPLQ9H1B7 796 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 IFT22Q9H7X7 185 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 INCENPQ9NQS7 918 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 THG1LQ9NWX6 298 aaKnown RBP3.32□□□□□ -1.88
YBX3-214ENST00000544501 GALNT8Q9NY28 637 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 ARHGAP20Q9P2F6 1191 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 RBPJLQ9UBG7 517 aa3.32□□□□□ -1.88
YBX3-214ENST00000544501 MAFO75444 373 aaPredicted RBP3.31□□□□□ -1.88
YBX3-214ENST00000544501 FBXO21O94952 628 aa3.31□□□□□ -1.88
YBX3-214ENST00000544501 EYA4O95677 639 aa3.31□□□□□ -1.88
YBX3-214ENST00000544501 MPIG6BO95866 241 aa3.31□□□□□ -1.88
YBX3-214ENST00000544501 KNG1P01042 644 aa3.31□□□□□ -1.88
YBX3-214ENST00000544501 ZNF28P17035 718 aa3.31□□□□□ -1.88
YBX3-214ENST00000544501 SLC9A1P19634 815 aa3.31□□□□□ -1.88
YBX3-214ENST00000544501 CNGA1P29973 690 aa3.31□□□□□ -1.88
YBX3-214ENST00000544501 IL13P35225 146 aa3.31□□□□□ -1.88
YBX3-214ENST00000544501 ADCYAP1R1P41586 468 aa3.31□□□□□ -1.88
YBX3-214ENST00000544501 SARSP49591 514 aaKnown RBP3.31□□□□□ -1.88
YBX3-214ENST00000544501 IL2P60568 153 aa3.31□□□□□ -1.88
YBX3-214ENST00000544501 SMAD3P84022 425 aaKnown RBP3.31□□□□□ -1.88
YBX3-214ENST00000544501 NFKB2Q00653 900 aa3.31□□□□□ -1.88
YBX3-214ENST00000544501 RTP5Q14D33 572 aa3.31□□□□□ -1.88
YBX3-214ENST00000544501 STILQ15468 1287 aa3.31□□□□□ -1.88
YBX3-214ENST00000544501 SMAD2Q15796 467 aaKnown RBP3.31□□□□□ -1.88
YBX3-214ENST00000544501 SKOR2Q2VWA4 1001 aaPredicted RBP3.31□□□□□ -1.88
YBX3-214ENST00000544501 FAM26FQ5R3K3 315 aa3.31□□□□□ -1.88
YBX3-214ENST00000544501 RTN4RL1Q86UN2 441 aaPredicted RBP3.31□□□□□ -1.88
YBX3-214ENST00000544501 STK32CQ86UX6 486 aa3.31□□□□□ -1.88
YBX3-214ENST00000544501 CARFQ8N187 725 aa3.31□□□□□ -1.88
YBX3-214ENST00000544501 HIPK4Q8NE63 616 aa3.31□□□□□ -1.88
YBX3-214ENST00000544501 ZCRB1Q8TBF4 217 aaKnown RBP3.31□□□□□ -1.88
YBX3-214ENST00000544501 CALML6Q8TD86 181 aa3.31□□□□□ -1.88
YBX3-214ENST00000544501 ZNF526Q8TF50 670 aaPredicted RBP3.31□□□□□ -1.88
YBX3-214ENST00000544501 FOXRED1Q96CU9 486 aaPredicted RBP3.31□□□□□ -1.88
YBX3-214ENST00000544501 FOXB1Q99853 325 aa3.31□□□□□ -1.88
YBX3-214ENST00000544501 BRINP2Q9C0B6 783 aa3.31□□□□□ -1.88
YBX3-214ENST00000544501 SLC39A2Q9NP94 309 aa3.31□□□□□ -1.88
YBX3-214ENST00000544501 KCND1Q9NSA2 647 aa3.31□□□□□ -1.88
YBX3-214ENST00000544501 USP36Q9P275 1121 aaKnown RBP3.31□□□□□ -1.88
YBX3-214ENST00000544501 ZFP69BQ9UJL9 534 aa3.31□□□□□ -1.88
YBX3-214ENST00000544501 PRAMEF22A3QJZ6 481 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 C9orf118A6NHY6 69 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 NEMP1O14524 444 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 TGM5O43548 720 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 IL18BPO95998 194 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 COL6A1P12109 1028 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 CD40P25942 277 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 PTX3P26022 381 aaPredicted RBP3.3□□□□□ -1.88
YBX3-214ENST00000544501 LSP1P33241 339 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 ECE1P42892 770 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 MLLT6P55198 1093 aaPredicted RBP3.3□□□□□ -1.88
YBX3-214ENST00000544501 ALDH6A1Q02252 535 aaKnown RBP3.3□□□□□ -1.88
YBX3-214ENST00000544501 ROM1Q03395 351 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 FAPQ12884 760 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 STRN3Q13033 797 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 PRAMEF18Q5VWM3 479 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 STRA8Q7Z7C7 330 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 PHYKPLQ8IUZ5 450 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 STPG3Q8N7X2 389 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 UBR7Q8N806 425 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 ZNF610Q8N9Z0 462 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 TP53I13Q8NBR0 393 aaPredicted RBP3.3□□□□□ -1.88
YBX3-214ENST00000544501 WDR48Q8TAF3 677 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 ZSWIM3Q96MP5 696 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 GPR101Q96P66 508 aaPredicted RBP3.3□□□□□ -1.88
YBX3-214ENST00000544501 OR10A5Q9H207 317 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 ZMAT4Q9H898 229 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 L2HGDHQ9H9P8 463 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 EMC7Q9NPA0 242 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 LUC7LQ9NQ29 371 aaKnown RBP3.3□□□□□ -1.88
YBX3-214ENST00000544501 TOMM22Q9NS69 142 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 SPTLC3Q9NUV7 552 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 UCKL1Q9NWZ5 548 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 H2AFY2Q9P0M6 372 aaPredicted RBP3.3□□□□□ -1.88
YBX3-214ENST00000544501 FTSJ1Q9UET6 329 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 MCM8Q9UJA3 840 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 FBXO10Q9UK96 956 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 CROTQ9UKG9 612 aa3.3□□□□□ -1.88
YBX3-214ENST00000544501 APOBEC2Q9Y235 224 aaKnown RBP3.3□□□□□ -1.88
YBX3-214ENST00000544501 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.29□□□□□ -1.88
YBX3-214ENST00000544501 UBA6A0AVT1 1052 aaPredicted RBP3.29□□□□□ -1.88
YBX3-214ENST00000544501 ANKRD62A6NC57 917 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms