RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 PAK2Q13177 524 aa25.83■■□□□ 1.73
CDKN3-207ENST00000543789 CEP55Q53EZ4 464 aa25.83■■□□□ 1.73
CDKN3-207ENST00000543789 WWC2Q6AWC2 1192 aa25.83■■□□□ 1.73
CDKN3-207ENST00000543789 TEX2Q8IWB9 1127 aa25.83■■□□□ 1.73
CDKN3-207ENST00000543789 TRAPPC12Q8WVT3 735 aa25.83■■□□□ 1.73
CDKN3-207ENST00000543789 PPP2R3CQ969Q6 453 aa25.83■■□□□ 1.73
CDKN3-207ENST00000543789 POP1Q99575 1024 aaKnown RBP25.83■■□□□ 1.73
CDKN3-207ENST00000543789 ESYT1Q9BSJ8 1104 aa25.83■■□□□ 1.73
CDKN3-207ENST00000543789 RIC8AQ9NPQ8 531 aa25.83■■□□□ 1.73
CDKN3-207ENST00000543789 IGSF9BQ9UPX0 1349 aa25.83■■□□□ 1.73
CDKN3-207ENST00000543789 DOCK5Q9H7D0 1870 aa25.83■■□□□ 1.72
CDKN3-207ENST00000543789 SMIM35A0A1B0GVV1 85 aa25.82■■□□□ 1.72
CDKN3-207ENST00000543789 IRS1P35568 1242 aa25.82■■□□□ 1.72
CDKN3-207ENST00000543789 NAPAP54920 295 aa25.82■■□□□ 1.72
CDKN3-207ENST00000543789 ADAM15Q13444 863 aa25.82■■□□□ 1.72
CDKN3-207ENST00000543789 SMAD4Q13485 552 aaKnown RBP25.82■■□□□ 1.72
CDKN3-207ENST00000543789 SPPL3Q8TCT6 385 aa25.82■■□□□ 1.72
CDKN3-207ENST00000543789 AGO4Q9HCK5 861 aaKnown RBP25.82■■□□□ 1.72
CDKN3-207ENST00000543789 RBM28Q9NW13 759 aaKnown RBP25.82■■□□□ 1.72
CDKN3-207ENST00000543789 CD207Q9UJ71 328 aa25.82■■□□□ 1.72
CDKN3-207ENST00000543789 LINC01565O15544 149 aa25.81■■□□□ 1.72
CDKN3-207ENST00000543789 TBX10O75333 385 aa25.81■■□□□ 1.72
CDKN3-207ENST00000543789 ATG7O95352 703 aa25.81■■□□□ 1.72
CDKN3-207ENST00000543789 ITGB1P05556 798 aa25.81■■□□□ 1.72
CDKN3-207ENST00000543789 SCG2P13521 617 aa25.81■■□□□ 1.72
CDKN3-207ENST00000543789 SLC26A2P50443 739 aa25.81■■□□□ 1.72
CDKN3-207ENST00000543789 KRT76Q01546 638 aa25.81■■□□□ 1.72
CDKN3-207ENST00000543789 PAN2Q504Q3 1202 aaKnown RBP25.81■■□□□ 1.72
CDKN3-207ENST00000543789 MTHFD1LQ6UB35 978 aa25.81■■□□□ 1.72
CDKN3-207ENST00000543789 KLHL23Q8NBE8 558 aa25.81■■□□□ 1.72
CDKN3-207ENST00000543789 PGBD1Q96JS3 809 aa25.81■■□□□ 1.72
CDKN3-207ENST00000543789 LRFN2Q9ULH4 789 aa25.81■■□□□ 1.72
CDKN3-207ENST00000543789 MYO7AQ13402 2215 aa25.8■■□□□ 1.72
CDKN3-207ENST00000543789 DNAJB1P25685 340 aa25.8■■□□□ 1.72
CDKN3-207ENST00000543789 IRX6P78412 446 aaPredicted RBP25.8■■□□□ 1.72
CDKN3-207ENST00000543789 ITGB3BPQ13352 177 aaPredicted RBP25.8■■□□□ 1.72
CDKN3-207ENST00000543789 TYW1BQ6NUM6 668 aa25.8■■□□□ 1.72
CDKN3-207ENST00000543789 TMX1Q9H3N1 280 aa25.8■■□□□ 1.72
CDKN3-207ENST00000543789 ANO2Q9NQ90 1003 aa25.8■■□□□ 1.72
CDKN3-207ENST00000543789 V9GY48 417 aaPredicted RBP25.8■■□□□ 1.72
CDKN3-207ENST00000543789 KDM3AQ9Y4C1 1321 aa25.8■■□□□ 1.72
CDKN3-207ENST00000543789 MEIS1O00470 390 aa25.79■■□□□ 1.72
CDKN3-207ENST00000543789 NDUFV1P49821 464 aa25.79■■□□□ 1.72
CDKN3-207ENST00000543789 ADCY7P51828 1080 aa25.79■■□□□ 1.72
CDKN3-207ENST00000543789 PPP1R18Q6NYC8 613 aa25.79■■□□□ 1.72
CDKN3-207ENST00000543789 APOA5Q6Q788 366 aa25.79■■□□□ 1.72
CDKN3-207ENST00000543789 FAM43BQ6ZT52 329 aaPredicted RBP25.79■■□□□ 1.72
CDKN3-207ENST00000543789 ANO3Q9BYT9 981 aa25.79■■□□□ 1.72
CDKN3-207ENST00000543789 TTC3P53804 2025 aa25.78■■□□□ 1.72
CDKN3-207ENST00000543789 SMCO2A6NFE2 343 aa25.78■■□□□ 1.72
CDKN3-207ENST00000543789 KLRC1P26715 233 aa25.78■■□□□ 1.72
CDKN3-207ENST00000543789 ZNF76P36508 570 aa25.78■■□□□ 1.72
CDKN3-207ENST00000543789 NFX1Q12986 1120 aaKnown RBP25.78■■□□□ 1.72
CDKN3-207ENST00000543789 TMEM266Q2M3C6 531 aa25.78■■□□□ 1.72
CDKN3-207ENST00000543789 RNF20Q5VTR2 975 aa25.78■■□□□ 1.72
CDKN3-207ENST00000543789 POF1BQ8WVV4 589 aa25.78■■□□□ 1.72
CDKN3-207ENST00000543789 PCDHB7Q9Y5E2 793 aa25.78■■□□□ 1.72
CDKN3-207ENST00000543789 CNTNAP5Q8WYK1 1306 aa25.78■■□□□ 1.72
CDKN3-207ENST00000543789 KAT6AQ92794 2004 aa25.78■■□□□ 1.72
CDKN3-207ENST00000543789 RALGAPA2Q2PPJ7 1873 aa25.77■■□□□ 1.72
CDKN3-207ENST00000543789 IGKV6D-21A0A0A0MT36 114 aa25.77■■□□□ 1.72
CDKN3-207ENST00000543789 STXBP3O00186 592 aa25.77■■□□□ 1.72
CDKN3-207ENST00000543789 HBP1O60381 514 aa25.77■■□□□ 1.72
CDKN3-207ENST00000543789 EYA4O95677 639 aa25.77■■□□□ 1.72
CDKN3-207ENST00000543789 SARSP49591 514 aaKnown RBP25.77■■□□□ 1.72
CDKN3-207ENST00000543789 GATMP50440 423 aa25.77■■□□□ 1.72
CDKN3-207ENST00000543789 FUT2Q10981 343 aa25.77■■□□□ 1.72
CDKN3-207ENST00000543789 RTN1Q16799 776 aa25.77■■□□□ 1.72
CDKN3-207ENST00000543789 EFHBQ8N7U6 833 aa25.77■■□□□ 1.72
CDKN3-207ENST00000543789 MSLNLQ96KJ4 702 aa25.77■■□□□ 1.72
CDKN3-207ENST00000543789 NEK1Q96PY6 1258 aa25.77■■□□□ 1.72
CDKN3-207ENST00000543789 GLT8D2Q9H1C3 349 aa25.77■■□□□ 1.72
CDKN3-207ENST00000543789 GINS2Q9Y248 185 aa25.77■■□□□ 1.72
CDKN3-207ENST00000543789 BACH1O14867 736 aa25.76■■□□□ 1.71
CDKN3-207ENST00000543789 ZBTB43O43298 467 aa25.76■■□□□ 1.71
CDKN3-207ENST00000543789 CCNE2O96020 404 aa25.76■■□□□ 1.71
CDKN3-207ENST00000543789 IBSPP21815 317 aaPredicted RBP25.76■■□□□ 1.71
CDKN3-207ENST00000543789 SREBF1P36956 1147 aa25.76■■□□□ 1.71
CDKN3-207ENST00000543789 AP3B2Q13367 1082 aa25.76■■□□□ 1.71
CDKN3-207ENST00000543789 HERC4Q5GLZ8 1057 aaPredicted RBP25.76■■□□□ 1.71
CDKN3-207ENST00000543789 FAM160B1Q5W0V3 765 aa25.76■■□□□ 1.71
CDKN3-207ENST00000543789 ABHD15Q6UXT9 468 aa25.76■■□□□ 1.71
CDKN3-207ENST00000543789 NIPA1Q7RTP0 329 aa25.76■■□□□ 1.71
CDKN3-207ENST00000543789 ADGRD2Q7Z7M1 963 aa25.76■■□□□ 1.71
CDKN3-207ENST00000543789 ALYREFQ86V81 257 aaKnown RBP25.76■■□□□ 1.71
CDKN3-207ENST00000543789 RNF135Q8IUD6 432 aa25.76■■□□□ 1.71
CDKN3-207ENST00000543789 KIAA0319LQ8IZA0 1049 aa25.76■■□□□ 1.71
CDKN3-207ENST00000543789 ATP8B4Q8TF62 1192 aa25.76■■□□□ 1.71
CDKN3-207ENST00000543789 KCNH6Q9H252 994 aa25.76■■□□□ 1.71
CDKN3-207ENST00000543789 TMEM260Q9NX78 707 aa25.76■■□□□ 1.71
CDKN3-207ENST00000543789 BARHL2Q9NY43 387 aa25.76■■□□□ 1.71
CDKN3-207ENST00000543789 MUTYHQ9UIF7 546 aa25.76■■□□□ 1.71
CDKN3-207ENST00000543789 hCG_1984214I3L0E3 225 aa25.75■■□□□ 1.71
CDKN3-207ENST00000543789 DDX39AO00148 427 aaKnown RBP25.75■■□□□ 1.71
CDKN3-207ENST00000543789 PPFIA3O75145 1194 aa25.75■■□□□ 1.71
CDKN3-207ENST00000543789 RPS6KA5O75582 802 aa25.75■■□□□ 1.71
CDKN3-207ENST00000543789 EXOSC10Q01780 885 aaKnown RBP25.75■■□□□ 1.71
CDKN3-207ENST00000543789 ZNF713Q8N859 430 aaPredicted RBP25.75■■□□□ 1.71
CDKN3-207ENST00000543789 ERVK-5Q9HDB9 667 aa25.75■■□□□ 1.71
CDKN3-207ENST00000543789 RNF216Q9NWF9 866 aaPredicted RBP25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms