RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 IKQ13123 557 aaPredicted RBP9.49□□□□□ -0.89
CLPB-211ENST00000542555 FAM47CQ5HY64 1035 aa9.49□□□□□ -0.89
CLPB-211ENST00000542555 IQSEC1Q6DN90 963 aa9.49□□□□□ -0.89
CLPB-211ENST00000542555 SIAH1Q8IUQ4 282 aa9.49□□□□□ -0.89
CLPB-211ENST00000542555 CCDC144CPQ8IYA2 1237 aa9.49□□□□□ -0.89
CLPB-211ENST00000542555 LCORLQ8N3X6 602 aa9.49□□□□□ -0.89
CLPB-211ENST00000542555 SLC43A3Q8NBI5 491 aa9.49□□□□□ -0.89
CLPB-211ENST00000542555 EAF2Q96CJ1 260 aaPredicted RBP9.49□□□□□ -0.89
CLPB-211ENST00000542555 IFT43Q96FT9 208 aa9.49□□□□□ -0.89
CLPB-211ENST00000542555 SCLYQ96I15 445 aa9.49□□□□□ -0.89
CLPB-211ENST00000542555 DNAJC2Q99543 621 aaKnown RBP9.49□□□□□ -0.89
CLPB-211ENST00000542555 TRPV6Q9H1D0 765 aa9.49□□□□□ -0.89
CLPB-211ENST00000542555 KCNH6Q9H252 994 aa9.49□□□□□ -0.89
CLPB-211ENST00000542555 ARMT1Q9H993 441 aa9.49□□□□□ -0.89
CLPB-211ENST00000542555 RAVER2Q9HCJ3 691 aaKnown RBP9.49□□□□□ -0.89
CLPB-211ENST00000542555 SRA1Q9HD15 236 aaKnown RBP9.49□□□□□ -0.89
CLPB-211ENST00000542555 TLR7Q9NYK1 1049 aaKnown RBP9.49□□□□□ -0.89
CLPB-211ENST00000542555 LMCD1Q9NZU5 365 aa9.49□□□□□ -0.89
CLPB-211ENST00000542555 FEM1BQ9UK73 627 aa9.49□□□□□ -0.89
CLPB-211ENST00000542555 FAM50BQ9Y247 325 aa9.49□□□□□ -0.89
CLPB-211ENST00000542555 OAS3Q9Y6K5 1087 aaKnown RBP9.49□□□□□ -0.89
CLPB-211ENST00000542555 ZNF536O15090 1300 aa9.49□□□□□ -0.89
CLPB-211ENST00000542555 F5H6K3 240 aa9.48□□□□□ -0.89
CLPB-211ENST00000542555 GOLIM4O00461 696 aa9.48□□□□□ -0.89
CLPB-211ENST00000542555 B4GALT4O60513 344 aa9.48□□□□□ -0.89
CLPB-211ENST00000542555 IGLV1-40P01703 118 aa9.48□□□□□ -0.89
CLPB-211ENST00000542555 RASA1P20936 1047 aa9.48□□□□□ -0.89
CLPB-211ENST00000542555 OAZ1P54368 228 aa9.48□□□□□ -0.89
CLPB-211ENST00000542555 NRLP54845 237 aa9.48□□□□□ -0.89
CLPB-211ENST00000542555 NKX3-2P78367 333 aa9.48□□□□□ -0.89
CLPB-211ENST00000542555 KLRC3Q07444 240 aa9.48□□□□□ -0.89
CLPB-211ENST00000542555 C12orf60Q5U649 245 aa9.48□□□□□ -0.89
CLPB-211ENST00000542555 GDF6Q6KF10 455 aaPredicted RBP9.48□□□□□ -0.89
CLPB-211ENST00000542555 ZSCAN25Q6NSZ9 544 aa9.48□□□□□ -0.89
CLPB-211ENST00000542555 C16orf86Q6ZW13 317 aa9.48□□□□□ -0.89
CLPB-211ENST00000542555 FTSJ3Q8IY81 847 aaKnown RBP9.48□□□□□ -0.89
CLPB-211ENST00000542555 GJD3Q8N144 294 aa9.48□□□□□ -0.89
CLPB-211ENST00000542555 CLASRPQ8N2M8 674 aaKnown RBP9.48□□□□□ -0.89
CLPB-211ENST00000542555 IL22RA1Q8N6P7 574 aa9.48□□□□□ -0.89
CLPB-211ENST00000542555 ACAD9Q9H845 621 aa9.48□□□□□ -0.89
CLPB-211ENST00000542555 NOP58Q9Y2X3 529 aaKnown RBP9.48□□□□□ -0.89
CLPB-211ENST00000542555 Q9Y3F1 56 aa9.48□□□□□ -0.89
CLPB-211ENST00000542555 NAV1Q8NEY1 1877 aa9.48□□□□□ -0.89
CLPB-211ENST00000542555 VCANP13611 3396 aa9.48□□□□□ -0.89
CLPB-211ENST00000542555 UMODL1Q5DID0 1318 aa9.48□□□□□ -0.89
CLPB-211ENST00000542555 RAD50Q92878 1312 aa9.48□□□□□ -0.89
CLPB-211ENST00000542555 BAIAP3O94812 1187 aa9.47□□□□□ -0.89
CLPB-211ENST00000542555 MBD4O95243 580 aa9.47□□□□□ -0.89
CLPB-211ENST00000542555 IFIT2P09913 472 aaKnown RBP9.47□□□□□ -0.89
CLPB-211ENST00000542555 TRIM27P14373 513 aa9.47□□□□□ -0.89
CLPB-211ENST00000542555 GRIK1P39086 918 aa9.47□□□□□ -0.89
CLPB-211ENST00000542555 CPT1AP50416 773 aa9.47□□□□□ -0.89
CLPB-211ENST00000542555 GRB10Q13322 594 aa9.47□□□□□ -0.89
CLPB-211ENST00000542555 BFSP2Q13515 415 aa9.47□□□□□ -0.89
CLPB-211ENST00000542555 TTLL4Q14679 1199 aa9.47□□□□□ -0.89
CLPB-211ENST00000542555 TKFCQ3LXA3 575 aa9.47□□□□□ -0.89
CLPB-211ENST00000542555 KIAA1211Q6ZU35 1233 aa9.47□□□□□ -0.89
CLPB-211ENST00000542555 MAP4K3Q8IVH8 894 aa9.47□□□□□ -0.89
CLPB-211ENST00000542555 HERC6Q8IVU3 1022 aa9.47□□□□□ -0.89
CLPB-211ENST00000542555 ZNF444Q8N0Y2 327 aaPredicted RBP9.47□□□□□ -0.89
CLPB-211ENST00000542555 REPS2Q8NFH8 660 aa9.47□□□□□ -0.89
CLPB-211ENST00000542555 PLD4Q96BZ4 506 aa9.47□□□□□ -0.89
CLPB-211ENST00000542555 MPHOSPH6Q99547 160 aaKnown RBP9.47□□□□□ -0.89
CLPB-211ENST00000542555 NUP88Q99567 741 aaPredicted RBP9.47□□□□□ -0.89
CLPB-211ENST00000542555 BCL11AQ9H165 835 aa9.47□□□□□ -0.89
CLPB-211ENST00000542555 WNT8AQ9H1J5 351 aa9.47□□□□□ -0.89
CLPB-211ENST00000542555 RBSNQ9H1K0 784 aa9.47□□□□□ -0.89
CLPB-211ENST00000542555 ALDH8A1Q9H2A2 487 aaPredicted RBP9.47□□□□□ -0.89
CLPB-211ENST00000542555 HOMER2Q9NSB8 354 aa9.47□□□□□ -0.89
CLPB-211ENST00000542555 KLK14Q9P0G3 267 aa9.47□□□□□ -0.89
CLPB-211ENST00000542555 NYAP2Q9P242 653 aa9.47□□□□□ -0.89
CLPB-211ENST00000542555 ARPP21Q9UBL0 812 aaPredicted RBP9.47□□□□□ -0.89
CLPB-211ENST00000542555 CLIP2Q9UDT6 1046 aa9.47□□□□□ -0.89
CLPB-211ENST00000542555 RIPK3Q9Y572 518 aa9.47□□□□□ -0.89
CLPB-211ENST00000542555 SLC4A4Q9Y6R1 1079 aa9.47□□□□□ -0.89
CLPB-211ENST00000542555 TNKSO95271 1327 aa9.47□□□□□ -0.89
CLPB-211ENST00000542555 SPTBN5Q9NRC6 3674 aaKnown RBP9.47□□□□□ -0.89
CLPB-211ENST00000542555 MYO9BQ13459 2157 aa9.46□□□□□ -0.89
CLPB-211ENST00000542555 KPNA6O60684 536 aa9.46□□□□□ -0.9
CLPB-211ENST00000542555 NDUFB10O96000 172 aa9.46□□□□□ -0.9
CLPB-211ENST00000542555 TGFB1P01137 390 aa9.46□□□□□ -0.9
CLPB-211ENST00000542555 GHRHP01286 108 aa9.46□□□□□ -0.9
CLPB-211ENST00000542555 MYL3P08590 195 aa9.46□□□□□ -0.9
CLPB-211ENST00000542555 GRNP28799 593 aaKnown RBP9.46□□□□□ -0.9
CLPB-211ENST00000542555 PSMC6P62333 389 aa9.46□□□□□ -0.9
CLPB-211ENST00000542555 TAP1Q03518 808 aa9.46□□□□□ -0.9
CLPB-211ENST00000542555 ZKSCAN2Q63HK3 967 aa9.46□□□□□ -0.9
CLPB-211ENST00000542555 TRMT2AQ8IZ69 625 aaKnown RBP9.46□□□□□ -0.9
CLPB-211ENST00000542555 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.46□□□□□ -0.9
CLPB-211ENST00000542555 CHURC1Q8WUH1 139 aa9.46□□□□□ -0.9
CLPB-211ENST00000542555 SNX27Q96L92 541 aa9.46□□□□□ -0.9
CLPB-211ENST00000542555 UPF3BQ9BZI7 483 aaKnown RBP9.46□□□□□ -0.9
CLPB-211ENST00000542555 UBE2ZQ9H832 354 aaPredicted RBP9.46□□□□□ -0.9
CLPB-211ENST00000542555 SLC38A10Q9HBR0 1119 aa9.46□□□□□ -0.9
CLPB-211ENST00000542555 ADD3Q9UEY8 706 aaKnown RBP9.46□□□□□ -0.9
CLPB-211ENST00000542555 CTNNA3Q9UI47 895 aa9.46□□□□□ -0.9
CLPB-211ENST00000542555 LRRC37A2A6NM11 1700 aa9.45□□□□□ -0.9
CLPB-211ENST00000542555 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.45□□□□□ -0.9
CLPB-211ENST00000542555 KIAA1324LA8MWY0 1029 aaPredicted RBP9.45□□□□□ -0.9
CLPB-211ENST00000542555 CTAGE5O15320 804 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms