RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 FER1L6Q2WGJ9 1857 aa6.7□□□□□ -1.34
CPSF7-220ENST00000541963 CCDC88AQ3V6T2 1871 aa6.7□□□□□ -1.34
CPSF7-220ENST00000541963 GOLGB1Q14789 3259 aaKnown RBP6.7□□□□□ -1.34
CPSF7-220ENST00000541963 TMEM265A0A087WTH1 108 aa6.7□□□□□ -1.34
CPSF7-220ENST00000541963 IGKV5-2P06315 115 aa6.7□□□□□ -1.34
CPSF7-220ENST00000541963 HOXC12P31275 282 aa6.7□□□□□ -1.34
CPSF7-220ENST00000541963 OXCT1P55809 520 aa6.7□□□□□ -1.34
CPSF7-220ENST00000541963 SUMO1P63165 101 aaKnown RBP6.7□□□□□ -1.34
CPSF7-220ENST00000541963 GCKRQ14397 625 aa6.7□□□□□ -1.34
CPSF7-220ENST00000541963 ALDH1L2Q3SY69 923 aa6.7□□□□□ -1.34
CPSF7-220ENST00000541963 GTF2IRD2BQ6EKJ0 949 aa6.7□□□□□ -1.34
CPSF7-220ENST00000541963 GPAT2Q6NUI2 795 aa6.7□□□□□ -1.34
CPSF7-220ENST00000541963 GTF2IRD2Q86UP8 949 aa6.7□□□□□ -1.34
CPSF7-220ENST00000541963 NIM1KQ8IY84 436 aa6.7□□□□□ -1.34
CPSF7-220ENST00000541963 KCTD13Q8WZ19 329 aa6.7□□□□□ -1.34
CPSF7-220ENST00000541963 MRGPRX3Q96LB0 322 aa6.7□□□□□ -1.34
CPSF7-220ENST00000541963 CDC5LQ99459 802 aaKnown RBP6.7□□□□□ -1.34
CPSF7-220ENST00000541963 EYA3Q99504 573 aa6.7□□□□□ -1.34
CPSF7-220ENST00000541963 ARHGEF4Q9NR80 690 aa6.7□□□□□ -1.34
CPSF7-220ENST00000541963 ZSWIM5Q9P217 1185 aa6.7□□□□□ -1.34
CPSF7-220ENST00000541963 PPIP5K2O43314 1243 aa6.69□□□□□ -1.34
CPSF7-220ENST00000541963 ALDH1L1O75891 902 aa6.69□□□□□ -1.34
CPSF7-220ENST00000541963 CPP00450 1065 aa6.69□□□□□ -1.34
CPSF7-220ENST00000541963 CEACAM5P06731 702 aa6.69□□□□□ -1.34
CPSF7-220ENST00000541963 SNRPB2P08579 225 aaKnown RBP6.69□□□□□ -1.34
CPSF7-220ENST00000541963 PABPC1P11940 636 aaKnown RBP6.69□□□□□ -1.34
CPSF7-220ENST00000541963 L1CAMP32004 1257 aa6.69□□□□□ -1.34
CPSF7-220ENST00000541963 CLCN7P51798 805 aa6.69□□□□□ -1.34
CPSF7-220ENST00000541963 PRELPP51888 382 aa6.69□□□□□ -1.34
CPSF7-220ENST00000541963 PCBP3P57721 371 aaKnown RBP6.69□□□□□ -1.34
CPSF7-220ENST00000541963 SLC4A10Q6U841 1118 aa6.69□□□□□ -1.34
CPSF7-220ENST00000541963 OLFM4Q6UX06 510 aa6.69□□□□□ -1.34
CPSF7-220ENST00000541963 ANKRD18AQ8IVF6 992 aa6.69□□□□□ -1.34
CPSF7-220ENST00000541963 SHISA5Q8N114 240 aa6.69□□□□□ -1.34
CPSF7-220ENST00000541963 ZNF513Q8N8E2 541 aaPredicted RBP6.69□□□□□ -1.34
CPSF7-220ENST00000541963 FAM181AQ8N9Y4 354 aa6.69□□□□□ -1.34
CPSF7-220ENST00000541963 NETO1Q8TDF5 533 aa6.69□□□□□ -1.34
CPSF7-220ENST00000541963 BTN2A2Q8WVV5 523 aa6.69□□□□□ -1.34
CPSF7-220ENST00000541963 IER2Q9BTL4 223 aa6.69□□□□□ -1.34
CPSF7-220ENST00000541963 RTFDC1Q9BY42 306 aaPredicted RBP6.69□□□□□ -1.34
CPSF7-220ENST00000541963 NMRK2Q9NPI5 230 aa6.69□□□□□ -1.34
CPSF7-220ENST00000541963 CYP26B1Q9NR63 512 aa6.69□□□□□ -1.34
CPSF7-220ENST00000541963 C9orf78Q9NZ63 289 aaPredicted RBP6.69□□□□□ -1.34
CPSF7-220ENST00000541963 RNF112Q9ULX5 631 aa6.69□□□□□ -1.34
CPSF7-220ENST00000541963 PRKAB1Q9Y478 270 aa6.69□□□□□ -1.34
CPSF7-220ENST00000541963 SNX11Q9Y5W9 270 aa6.69□□□□□ -1.34
CPSF7-220ENST00000541963 DICER1Q9UPY3 1922 aaKnown RBP6.69□□□□□ -1.34
CPSF7-220ENST00000541963 PTPRCP08575 1304 aa6.69□□□□□ -1.34
CPSF7-220ENST00000541963 TNRC6CQ9HCJ0 1690 aaKnown RBP6.68□□□□□ -1.34
CPSF7-220ENST00000541963 DNAJC25-GNG10A0A024R161 153 aa6.68□□□□□ -1.34
CPSF7-220ENST00000541963 FZD9O00144 591 aa6.68□□□□□ -1.34
CPSF7-220ENST00000541963 DDNO94850 711 aaPredicted RBP6.68□□□□□ -1.34
CPSF7-220ENST00000541963 ENDOUP21128 410 aaKnown RBP6.68□□□□□ -1.34
CPSF7-220ENST00000541963 IBSPP21815 317 aaPredicted RBP6.68□□□□□ -1.34
CPSF7-220ENST00000541963 TPP2P29144 1249 aaPredicted RBP6.68□□□□□ -1.34
CPSF7-220ENST00000541963 IGHMBP2P38935 993 aaKnown RBP6.68□□□□□ -1.34
CPSF7-220ENST00000541963 GYS2P54840 703 aa6.68□□□□□ -1.34
CPSF7-220ENST00000541963 CTSWP56202 376 aa6.68□□□□□ -1.34
CPSF7-220ENST00000541963 FSTL1Q12841 308 aa6.68□□□□□ -1.34
CPSF7-220ENST00000541963 IFI16Q16666 785 aaKnown RBP6.68□□□□□ -1.34
CPSF7-220ENST00000541963 DPY19L1Q2PZI1 675 aa6.68□□□□□ -1.34
CPSF7-220ENST00000541963 FAM209AQ5JX71 171 aa6.68□□□□□ -1.34
CPSF7-220ENST00000541963 BEND3Q5T5X7 828 aa6.68□□□□□ -1.34
CPSF7-220ENST00000541963 ZNF662Q6ZS27 426 aa6.68□□□□□ -1.34
CPSF7-220ENST00000541963 UBE3BQ7Z3V4 1068 aa6.68□□□□□ -1.34
CPSF7-220ENST00000541963 THAP5Q7Z6K1 395 aa6.68□□□□□ -1.34
CPSF7-220ENST00000541963 TSPYL5Q86VY4 417 aaPredicted RBP6.68□□□□□ -1.34
CPSF7-220ENST00000541963 TRMT2AQ8IZ69 625 aaKnown RBP6.68□□□□□ -1.34
CPSF7-220ENST00000541963 GPC2Q8N158 579 aa6.68□□□□□ -1.34
CPSF7-220ENST00000541963 SMC1BQ8NDV3 1235 aa6.68□□□□□ -1.34
CPSF7-220ENST00000541963 TTLL11Q8NHH1 800 aa6.68□□□□□ -1.34
CPSF7-220ENST00000541963 CELF1Q92879 486 aaKnown RBP6.68□□□□□ -1.34
CPSF7-220ENST00000541963 UBE2FQ969M7 185 aa6.68□□□□□ -1.34
CPSF7-220ENST00000541963 TCTN2Q96GX1 697 aa6.68□□□□□ -1.34
CPSF7-220ENST00000541963 HSPA12BQ96MM6 686 aa6.68□□□□□ -1.34
CPSF7-220ENST00000541963 PLA2G12BQ9BX93 195 aa6.68□□□□□ -1.34
CPSF7-220ENST00000541963 LGR4Q9BXB1 951 aa6.68□□□□□ -1.34
CPSF7-220ENST00000541963 DUSP15Q9H1R2 295 aaPredicted RBP6.68□□□□□ -1.34
CPSF7-220ENST00000541963 HDAC5Q9UQL6 1122 aa6.68□□□□□ -1.34
CPSF7-220ENST00000541963 GPR55Q9Y2T6 319 aaPredicted RBP6.68□□□□□ -1.34
CPSF7-220ENST00000541963 MRPS23Q9Y3D9 190 aaKnown RBP6.68□□□□□ -1.34
CPSF7-220ENST00000541963 ANKRD18BA2A2Z9 1011 aa6.67□□□□□ -1.34
CPSF7-220ENST00000541963 H0Y8X5 98 aa6.67□□□□□ -1.34
CPSF7-220ENST00000541963 H3BS24 57 aa6.67□□□□□ -1.34
CPSF7-220ENST00000541963 IGHA1P01876 353 aa6.67□□□□□ -1.34
CPSF7-220ENST00000541963 CD3EP07766 207 aa6.67□□□□□ -1.34
CPSF7-220ENST00000541963 GRIK1P39086 918 aa6.67□□□□□ -1.34
CPSF7-220ENST00000541963 ECI1P42126 302 aa6.67□□□□□ -1.34
CPSF7-220ENST00000541963 GSK3AP49840 483 aa6.67□□□□□ -1.34
CPSF7-220ENST00000541963 KIAA2012Q0VF49 1180 aa6.67□□□□□ -1.34
CPSF7-220ENST00000541963 TNIP1Q15025 636 aa6.67□□□□□ -1.34
CPSF7-220ENST00000541963 AOC3Q16853 763 aa6.67□□□□□ -1.34
CPSF7-220ENST00000541963 NKPD1Q17RQ9 610 aa6.67□□□□□ -1.34
CPSF7-220ENST00000541963 KIAA0907Q7Z7F0 614 aaPredicted RBP6.67□□□□□ -1.34
CPSF7-220ENST00000541963 PNMA8AQ86V59 439 aaPredicted RBP6.67□□□□□ -1.34
CPSF7-220ENST00000541963 SSH1Q8WYL5 1049 aa6.67□□□□□ -1.34
CPSF7-220ENST00000541963 MPHOSPH8Q99549 860 aa6.67□□□□□ -1.34
CPSF7-220ENST00000541963 HDAC8Q9BY41 377 aa6.67□□□□□ -1.34
CPSF7-220ENST00000541963 NKX2-4Q9H2Z4 354 aa6.67□□□□□ -1.34
CPSF7-220ENST00000541963 SMC4Q9NTJ3 1288 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms