RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 S1PR5Q9H228 398 aa13.61□□□□□ -0.23
COPA-205ENST00000541366 TMX1Q9H3N1 280 aa13.61□□□□□ -0.23
COPA-205ENST00000541366 PROB1E7EW31 1015 aa13.6□□□□□ -0.23
COPA-205ENST00000541366 STAM2O75886 525 aa13.6□□□□□ -0.23
COPA-205ENST00000541366 INSRRP14616 1297 aa13.6□□□□□ -0.23
COPA-205ENST00000541366 FOXK2Q01167 660 aa13.6□□□□□ -0.23
COPA-205ENST00000541366 GRM4Q14833 912 aa13.6□□□□□ -0.23
COPA-205ENST00000541366 FNDC1Q4ZHG4 1894 aaPredicted RBP13.6□□□□□ -0.23
COPA-205ENST00000541366 SPOUT1Q5T280 376 aaKnown RBP13.6□□□□□ -0.23
COPA-205ENST00000541366 LLGL2Q6P1M3 1020 aa13.6□□□□□ -0.23
COPA-205ENST00000541366 TMEM105Q8N8V8 129 aa13.6□□□□□ -0.23
COPA-205ENST00000541366 KREMEN2Q8NCW0 462 aa13.6□□□□□ -0.23
COPA-205ENST00000541366 GLG1Q92896 1179 aa13.6□□□□□ -0.23
COPA-205ENST00000541366 NEK1Q96PY6 1258 aa13.6□□□□□ -0.23
COPA-205ENST00000541366 LNPKQ9C0E8 428 aa13.6□□□□□ -0.23
COPA-205ENST00000541366 TRPC6Q9Y210 931 aa13.6□□□□□ -0.23
COPA-205ENST00000541366 MGEA5O60502 916 aa13.59□□□□□ -0.23
COPA-205ENST00000541366 FGF18O76093 207 aa13.59□□□□□ -0.23
COPA-205ENST00000541366 BRD1O95696 1058 aa13.59□□□□□ -0.23
COPA-205ENST00000541366 STAG3L1P0CL83 205 aa13.59□□□□□ -0.23
COPA-205ENST00000541366 ARP10275 920 aa13.59□□□□□ -0.23
COPA-205ENST00000541366 KCNA2P16389 499 aa13.59□□□□□ -0.23
COPA-205ENST00000541366 TECP42680 631 aa13.59□□□□□ -0.23
COPA-205ENST00000541366 PAK2Q13177 524 aa13.59□□□□□ -0.23
COPA-205ENST00000541366 KCNC3Q14003 757 aa13.59□□□□□ -0.23
COPA-205ENST00000541366 IMMTQ16891 758 aaKnown RBP13.59□□□□□ -0.23
COPA-205ENST00000541366 FAM102BQ5T8I3 360 aa13.59□□□□□ -0.23
COPA-205ENST00000541366 PLPP4Q5VZY2 271 aa13.59□□□□□ -0.23
COPA-205ENST00000541366 PCNX4Q63HM2 1172 aa13.59□□□□□ -0.23
COPA-205ENST00000541366 SYCE2Q6PIF2 218 aa13.59□□□□□ -0.23
COPA-205ENST00000541366 TICAM2Q86XR7 235 aa13.59□□□□□ -0.23
COPA-205ENST00000541366 SEPT1Q8WYJ6 367 aa13.59□□□□□ -0.23
COPA-205ENST00000541366 PCYT2Q99447 389 aa13.59□□□□□ -0.23
COPA-205ENST00000541366 FTHL17Q9BXU8 183 aa13.59□□□□□ -0.23
COPA-205ENST00000541366 IRF2BPLQ9H1B7 796 aa13.59□□□□□ -0.23
COPA-205ENST00000541366 IL25Q9H293 177 aa13.59□□□□□ -0.23
COPA-205ENST00000541366 TSHZ2Q9NRE2 1034 aa13.59□□□□□ -0.23
COPA-205ENST00000541366 ERAP1Q9NZ08 941 aa13.59□□□□□ -0.23
COPA-205ENST00000541366 LRFN2Q9ULH4 789 aa13.59□□□□□ -0.23
COPA-205ENST00000541366 TRPV2Q9Y5S1 764 aa13.59□□□□□ -0.23
COPA-205ENST00000541366 DNAH14Q0VDD8 3507 aa13.59□□□□□ -0.23
COPA-205ENST00000541366 TBKBP1A7MCY6 615 aa13.58□□□□□ -0.24
COPA-205ENST00000541366 MEIS2O14770 477 aa13.58□□□□□ -0.24
COPA-205ENST00000541366 FSCN2O14926 492 aa13.58□□□□□ -0.24
COPA-205ENST00000541366 NT5C2P49902 561 aa13.58□□□□□ -0.24
COPA-205ENST00000541366 ANKRD54Q6NXT1 300 aa13.58□□□□□ -0.24
COPA-205ENST00000541366 FRMD5Q7Z6J6 570 aa13.58□□□□□ -0.24
COPA-205ENST00000541366 NLRX1Q86UT6 975 aa13.58□□□□□ -0.24
COPA-205ENST00000541366 CNNM2Q9H8M5 875 aa13.58□□□□□ -0.24
COPA-205ENST00000541366 TMEM260Q9NX78 707 aa13.58□□□□□ -0.24
COPA-205ENST00000541366 PCDHB12Q9Y5F1 795 aa13.58□□□□□ -0.24
COPA-205ENST00000541366 IGSF9BQ9UPX0 1349 aa13.58□□□□□ -0.24
COPA-205ENST00000541366 DMXL1Q9Y485 3027 aa13.58□□□□□ -0.24
COPA-205ENST00000541366 EP300Q09472 2414 aaPredicted RBP13.58□□□□□ -0.24
COPA-205ENST00000541366 HIDE1A8MVS5 230 aa13.57□□□□□ -0.24
COPA-205ENST00000541366 C2CD4DB7Z1M9 353 aa13.57□□□□□ -0.24
COPA-205ENST00000541366 ITGB5P18084 799 aa13.57□□□□□ -0.24
COPA-205ENST00000541366 NBL1P41271 181 aa13.57□□□□□ -0.24
COPA-205ENST00000541366 SARSP49591 514 aaKnown RBP13.57□□□□□ -0.24
COPA-205ENST00000541366 NFX1Q12986 1120 aaKnown RBP13.57□□□□□ -0.24
COPA-205ENST00000541366 IER5Q5VY09 327 aa13.57□□□□□ -0.24
COPA-205ENST00000541366 THNSL1Q8IYQ7 743 aa13.57□□□□□ -0.24
COPA-205ENST00000541366 COLGALT1Q8NBJ5 622 aa13.57□□□□□ -0.24
COPA-205ENST00000541366 SMARCC2Q8TAQ2 1214 aa13.57□□□□□ -0.24
COPA-205ENST00000541366 DSCC1Q9BVC3 393 aa13.57□□□□□ -0.24
COPA-205ENST00000541366 CELF4Q9BZC1 486 aaKnown RBP13.57□□□□□ -0.24
COPA-205ENST00000541366 SMARCAD1Q9H4L7 1026 aa13.57□□□□□ -0.24
COPA-205ENST00000541366 CDHR5Q9HBB8 845 aa13.57□□□□□ -0.24
COPA-205ENST00000541366 DIAPH3Q9NSV4 1193 aa13.57□□□□□ -0.24
COPA-205ENST00000541366 TYW1Q9NV66 732 aaKnown RBP13.57□□□□□ -0.24
COPA-205ENST00000541366 RRN3P2A6NIE6 340 aa13.56□□□□□ -0.24
COPA-205ENST00000541366 IFIT3O14879 490 aaKnown RBP13.56□□□□□ -0.24
COPA-205ENST00000541366 ASGR2P07307 311 aa13.56□□□□□ -0.24
COPA-205ENST00000541366 WEE2P0C1S8 567 aa13.56□□□□□ -0.24
COPA-205ENST00000541366 FGFR1P11362 822 aa13.56□□□□□ -0.24
COPA-205ENST00000541366 PBX3P40426 434 aa13.56□□□□□ -0.24
COPA-205ENST00000541366 UBE3AQ05086 875 aa13.56□□□□□ -0.24
COPA-205ENST00000541366 TROAPQ12815 778 aa13.56□□□□□ -0.24
COPA-205ENST00000541366 TRAF1Q13077 416 aa13.56□□□□□ -0.24
COPA-205ENST00000541366 PLCB4Q15147 1175 aa13.56□□□□□ -0.24
COPA-205ENST00000541366 TMEM184AQ6ZMB5 413 aa13.56□□□□□ -0.24
COPA-205ENST00000541366 GIMAP8Q8ND71 665 aaPredicted RBP13.56□□□□□ -0.24
COPA-205ENST00000541366 GPRASP2Q96D09 838 aa13.56□□□□□ -0.24
COPA-205ENST00000541366 CDCA3Q99618 268 aaPredicted RBP13.56□□□□□ -0.24
COPA-205ENST00000541366 ADAM2Q99965 735 aa13.56□□□□□ -0.24
COPA-205ENST00000541366 POMKQ9H5K3 350 aa13.56□□□□□ -0.24
COPA-205ENST00000541366 CWH43Q9H720 699 aa13.56□□□□□ -0.24
COPA-205ENST00000541366 GINS2Q9Y248 185 aa13.56□□□□□ -0.24
COPA-205ENST00000541366 NOC2LQ9Y3T9 749 aaKnown RBP13.56□□□□□ -0.24
COPA-205ENST00000541366 PCDHB7Q9Y5E2 793 aa13.56□□□□□ -0.24
COPA-205ENST00000541366 TAF6LQ9Y6J9 622 aa13.56□□□□□ -0.24
COPA-205ENST00000541366 SQORQ9Y6N5 450 aa13.56□□□□□ -0.24
COPA-205ENST00000541366 M0QZ92 97 aa13.55□□□□□ -0.24
COPA-205ENST00000541366 KRT76Q01546 638 aa13.55□□□□□ -0.24
COPA-205ENST00000541366 B4GALNT3Q6L9W6 998 aa13.55□□□□□ -0.24
COPA-205ENST00000541366 XRRA1Q6P2D8 792 aa13.55□□□□□ -0.24
COPA-205ENST00000541366 PLEKHM2Q8IWE5 1019 aa13.55□□□□□ -0.24
COPA-205ENST00000541366 SPDYE1Q8NFV5 336 aaPredicted RBP13.55□□□□□ -0.24
COPA-205ENST00000541366 TMEM40Q8WWA1 233 aa13.55□□□□□ -0.24
COPA-205ENST00000541366 TCF25Q9BQ70 676 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms