RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 ZNF652Q9Y2D9 606 aa15.19■□□□□ 0.02
SCNN1A-215ENST00000540037 LAMB2P55268 1798 aa15.19■□□□□ 0.02
SCNN1A-215ENST00000540037 BHMG1C9JSJ3 638 aaPredicted RBP15.19■□□□□ 0.02
SCNN1A-215ENST00000540037 PON1P27169 355 aa15.19■□□□□ 0.02
SCNN1A-215ENST00000540037 ELF1P32519 619 aa15.19■□□□□ 0.02
SCNN1A-215ENST00000540037 PRPF4BQ13523 1007 aaKnown RBP15.19■□□□□ 0.02
SCNN1A-215ENST00000540037 CCT6BQ92526 530 aa15.19■□□□□ 0.02
SCNN1A-215ENST00000540037 TBC1D31Q96DN5 1066 aa15.19■□□□□ 0.02
SCNN1A-215ENST00000540037 SGSM3Q96HU1 749 aa15.19■□□□□ 0.02
SCNN1A-215ENST00000540037 RAB34Q9BZG1 259 aa15.19■□□□□ 0.02
SCNN1A-215ENST00000540037 CLSTN1O94985 981 aa15.19■□□□□ 0.02
SCNN1A-215ENST00000540037 FGGP02679 453 aa15.19■□□□□ 0.02
SCNN1A-215ENST00000540037 PLA2G4BP0C869 781 aa15.19■□□□□ 0.02
SCNN1A-215ENST00000540037 IFFO1Q0D2I5 559 aa15.19■□□□□ 0.02
SCNN1A-215ENST00000540037 GLG1Q92896 1179 aa15.19■□□□□ 0.02
SCNN1A-215ENST00000540037 CEP63Q96MT8 703 aa15.19■□□□□ 0.02
SCNN1A-215ENST00000540037 PSMD1Q99460 953 aa15.19■□□□□ 0.02
SCNN1A-215ENST00000540037 GOPCQ9HD26 462 aa15.19■□□□□ 0.02
SCNN1A-215ENST00000540037 SRP68Q9UHB9 627 aaKnown RBP15.19■□□□□ 0.02
SCNN1A-215ENST00000540037 PCDHA12Q9UN75 941 aa15.19■□□□□ 0.02
SCNN1A-215ENST00000540037 XIRP1Q702N8 1843 aaKnown RBP15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 TLDC2A0PJX2 215 aa15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 CTNND1O60716 968 aaKnown RBP15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 RPSAP08865 295 aaKnown RBP15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 SLC16A2P36021 539 aa15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 PSEN1P49768 467 aa15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 ZNF211Q13398 564 aaPredicted RBP15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 ARSHQ5FYA8 562 aa15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 WLSQ5T9L3 541 aa15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 GKAP1Q5VSY0 366 aaPredicted RBP15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 TCERG1LQ5VWI1 586 aa15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 AADACL2Q6P093 401 aa15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 ATP8B4Q8TF62 1192 aa15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 U2AF1L4Q8WU68 220 aaKnown RBP15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 ACTR5Q9H9F9 607 aaPredicted RBP15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 ERVK-5Q9HDB9 667 aa15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 C5orf60A6NFR6 353 aa15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 MEIS1O00470 390 aa15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 CYP11B2P19099 503 aa15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 CASP4P49662 377 aa15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 DRP2Q13474 957 aa15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 DCAF12L1Q5VU92 463 aa15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 TTBK2Q6IQ55 1244 aa15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 NT5DC3Q86UY8 548 aa15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 NEDD1Q8NHV4 660 aa15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 RIOX1Q9H6W3 641 aa15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 GGT7Q9UJ14 662 aa15.18■□□□□ 0.02
SCNN1A-215ENST00000540037 POTEFA5A3E0 1075 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 DDX3XO00571 662 aaKnown RBP eCLIP15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 PPP1R12BO60237 982 aaPredicted RBP15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 POTEIP0CG38 1075 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 NF2P35240 595 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 BTDP43251 543 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 PSMC6P62333 389 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 KCNA1Q09470 495 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 ACCSLQ4AC99 568 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 POTEGQ6S5H5 508 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 POTEEQ6S8J3 1075 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 EPB41L4BQ9H329 900 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 ANKIB1Q9P2G1 1089 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 PPP1R9AQ9ULJ8 1098 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 STXBP5LQ9Y2K9 1186 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 SRRM3A6NNA2 597 aaPredicted RBP15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 KRT18P05783 430 aaKnown RBP15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 SLURP2P0DP57 97 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 CHN1P15882 459 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 ABCB4P21439 1286 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 RFC4P35249 363 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 HOXD13P35453 343 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 MARSP56192 900 aaKnown RBP15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 EXOC3L4Q17RC7 722 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 AGBL2Q5U5Z8 902 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 ARHGAP27Q6ZUM4 889 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 SELENOSQ9BQE4 189 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 DONSONQ9NYP3 566 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 IGSF9BQ9UPX0 1349 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 CES2O00748 559 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 CETN3O15182 167 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 MED24O75448 989 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 AKAP3O75969 853 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 GFPT2O94808 682 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 BAG3O95817 575 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 IFI35P80217 286 aaPredicted RBP15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 SPTY2D1Q68D10 685 aaPredicted RBP15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 C16orf86Q6ZW13 317 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 CCDC65Q8IXS2 484 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 CALR3Q96L12 384 aaKnown RBP15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 NLRP3Q96P20 1036 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 XPO6Q96QU8 1125 aaKnown RBP15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 RTFDC1Q9BY42 306 aaPredicted RBP15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 BMP2KQ9NSY1 1161 aaPredicted RBP15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 CEP83Q9Y592 693 aa15.17■□□□□ 0.02
SCNN1A-215ENST00000540037 ESYT2A0FGR8 921 aa15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 BTNL10A8MVZ5 291 aa15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 CLIC2O15247 247 aa15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 PAEPP09466 180 aa15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 POU5F1Q01860 360 aaKnown RBP15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 NFIXQ14938 502 aa15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 HIBCHQ6NVY1 386 aaPredicted RBP15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 LINC00116Q8NCU8 138 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms