RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 CNNM4Q6P4Q7 775 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 GRAMD1CQ8IYS0 662 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 TRIML1Q8N9V2 468 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 CD99L2Q8TCZ2 262 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 SMARCE1Q969G3 411 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 GSDMAQ96QA5 445 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 C7orf25Q9BPX7 421 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 FUCA2Q9BTY2 467 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 TRIM9Q9C026 710 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 GABRQQ9UN88 632 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 PCDHA5Q9Y5H7 936 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 GSTTP1A0A1W2PQM5 241 aa11.88□□□□□ -0.51
LEMD3-202ENST00000539442 NOP56O00567 594 aaKnown RBP11.88□□□□□ -0.51
LEMD3-202ENST00000539442 ZNF865P0CJ78 1059 aaPredicted RBP11.88□□□□□ -0.51
LEMD3-202ENST00000539442 CYP2C19P33261 490 aa11.88□□□□□ -0.51
LEMD3-202ENST00000539442 ADCYAP1R1P41586 468 aa11.88□□□□□ -0.51
LEMD3-202ENST00000539442 SLC12A3P55017 1021 aa11.88□□□□□ -0.51
LEMD3-202ENST00000539442 SP4Q02446 784 aa11.88□□□□□ -0.51
LEMD3-202ENST00000539442 TYRO3Q06418 890 aa11.88□□□□□ -0.51
LEMD3-202ENST00000539442 ARHGAP1Q07960 439 aa11.88□□□□□ -0.51
LEMD3-202ENST00000539442 FAM160B1Q5W0V3 765 aa11.88□□□□□ -0.51
LEMD3-202ENST00000539442 CCDC60Q8IWA6 550 aaPredicted RBP11.88□□□□□ -0.51
LEMD3-202ENST00000539442 ZNF710Q8N1W2 664 aa11.88□□□□□ -0.51
LEMD3-202ENST00000539442 SYT2Q8N9I0 419 aaPredicted RBP11.88□□□□□ -0.51
LEMD3-202ENST00000539442 BANK1Q8NDB2 785 aa11.88□□□□□ -0.51
LEMD3-202ENST00000539442 AFAP1L1Q8TED9 768 aa11.88□□□□□ -0.51
LEMD3-202ENST00000539442 ZNF296Q8WUU4 475 aaPredicted RBP11.88□□□□□ -0.51
LEMD3-202ENST00000539442 SPATA33Q96N06 139 aa11.88□□□□□ -0.51
LEMD3-202ENST00000539442 GPR20Q99678 358 aa11.88□□□□□ -0.51
LEMD3-202ENST00000539442 GTPBP4Q9BZE4 634 aaKnown RBP11.88□□□□□ -0.51
LEMD3-202ENST00000539442 BCAS3Q9H6U6 928 aa11.88□□□□□ -0.51
LEMD3-202ENST00000539442 ZNF302Q9NR11 478 aa11.88□□□□□ -0.51
LEMD3-202ENST00000539442 RMND1Q9NWS8 449 aa11.88□□□□□ -0.51
LEMD3-202ENST00000539442 KCND2Q9NZV8 630 aa11.88□□□□□ -0.51
LEMD3-202ENST00000539442 WRAP73Q9P2S5 460 aaPredicted RBP11.88□□□□□ -0.51
LEMD3-202ENST00000539442 GABBR1Q9UBS5 961 aa11.88□□□□□ -0.51
LEMD3-202ENST00000539442 DBR1Q9UK59 544 aaKnown RBP11.88□□□□□ -0.51
LEMD3-202ENST00000539442 MAFBQ9Y5Q3 323 aaPredicted RBP11.88□□□□□ -0.51
LEMD3-202ENST00000539442 MCM3APO60318 1980 aa11.88□□□□□ -0.51
LEMD3-202ENST00000539442 CASP8AP2Q9UKL3 1982 aa11.88□□□□□ -0.51
LEMD3-202ENST00000539442 EMSYQ7Z589 1322 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 BACH1O14867 736 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 LGR5O75473 907 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 CAVIN2O95810 425 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 SMPD1P17405 629 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 TCF7P36402 384 aaPredicted RBP11.87□□□□□ -0.51
LEMD3-202ENST00000539442 VASPP50552 380 aaPredicted RBP11.87□□□□□ -0.51
LEMD3-202ENST00000539442 PSMC6P62333 389 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 TNFAIP2Q03169 654 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 CUL4BQ13620 913 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 KCNB1Q14721 858 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 STX1AQ16623 288 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 UGCGQ16739 394 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 CCDC144BQ3MJ40 725 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 HSDL1Q3SXM5 330 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 SWSAP1Q6NVH7 229 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 PPTC7Q8NI37 304 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 TRIB2Q92519 343 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 STAMQ92783 540 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 ERCC4Q92889 916 aaPredicted RBP11.87□□□□□ -0.51
LEMD3-202ENST00000539442 COPS5Q92905 334 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 CCDC47Q96A33 483 aaKnown RBP11.87□□□□□ -0.51
LEMD3-202ENST00000539442 BHMT2Q9H2M3 363 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 TSPY26PQ9H489 355 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 AZI2Q9H6S1 392 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 ANKEF1Q9NU02 776 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 ANO10Q9NW15 660 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 WBP1LQ9NX94 342 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 FAM184BQ9ULE4 1060 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 Q9Y3F1 56 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 DOCK3Q8IZD9 2030 aa11.87□□□□□ -0.51
LEMD3-202ENST00000539442 ZSWIM8A7E2V4 1837 aa11.86□□□□□ -0.51
LEMD3-202ENST00000539442 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.86□□□□□ -0.51
LEMD3-202ENST00000539442 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.86□□□□□ -0.51
LEMD3-202ENST00000539442 PVALEFA0A1B0GWK0 134 aa11.86□□□□□ -0.51
LEMD3-202ENST00000539442 ARHGEF35A5YM69 484 aa11.86□□□□□ -0.51
LEMD3-202ENST00000539442 MYMKA6NI61 221 aa11.86□□□□□ -0.51
LEMD3-202ENST00000539442 SORBS3O60504 671 aa11.86□□□□□ -0.51
LEMD3-202ENST00000539442 RPN1P04843 607 aaKnown RBP11.86□□□□□ -0.51
LEMD3-202ENST00000539442 SSBP05455 408 aaKnown RBP eCLIP11.86□□□□□ -0.51
LEMD3-202ENST00000539442 CYBAP13498 195 aa11.86□□□□□ -0.51
LEMD3-202ENST00000539442 AKR1A1P14550 325 aa11.86□□□□□ -0.51
LEMD3-202ENST00000539442 CYP11B2P19099 503 aa11.86□□□□□ -0.51
LEMD3-202ENST00000539442 YWHABP31946 246 aaKnown RBP11.86□□□□□ -0.51
LEMD3-202ENST00000539442 RARRES1P49788 294 aa11.86□□□□□ -0.51
LEMD3-202ENST00000539442 SLC26A2P50443 739 aa11.86□□□□□ -0.51
LEMD3-202ENST00000539442 ASIC1P78348 528 aa11.86□□□□□ -0.51
LEMD3-202ENST00000539442 CAP1Q01518 475 aa11.86□□□□□ -0.51
LEMD3-202ENST00000539442 XKR3Q5GH77 459 aa11.86□□□□□ -0.51
LEMD3-202ENST00000539442 UNC13DQ70J99 1090 aa11.86□□□□□ -0.51
LEMD3-202ENST00000539442 OTUD6AQ7L8S5 288 aa11.86□□□□□ -0.51
LEMD3-202ENST00000539442 PLPPR4Q7Z2D5 763 aa11.86□□□□□ -0.51
LEMD3-202ENST00000539442 GPBP1Q86WP2 473 aa11.86□□□□□ -0.51
LEMD3-202ENST00000539442 OR6J1Q8NGC5 347 aa11.86□□□□□ -0.51
LEMD3-202ENST00000539442 PXYLP1Q8TE99 480 aa11.86□□□□□ -0.51
LEMD3-202ENST00000539442 PIGOQ8TEQ8 1089 aa11.86□□□□□ -0.51
LEMD3-202ENST00000539442 DDX12PQ92771 950 aa11.86□□□□□ -0.51
LEMD3-202ENST00000539442 FAM167AQ96KS9 214 aa11.86□□□□□ -0.51
LEMD3-202ENST00000539442 BLZF1Q9H2G9 400 aa11.86□□□□□ -0.51
LEMD3-202ENST00000539442 MAN1B1Q9UKM7 699 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms