RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 NID2Q14112 1375 aa14.26□□□□□ -0.13
VAMP1-206ENST00000538970 IGKV6D-21A0A0A0MT36 114 aa14.26□□□□□ -0.13
VAMP1-206ENST00000538970 ATG7O95352 703 aa14.26□□□□□ -0.13
VAMP1-206ENST00000538970 CCNE2O96020 404 aa14.26□□□□□ -0.13
VAMP1-206ENST00000538970 HMGB1P09429 215 aaKnown RBP14.26□□□□□ -0.13
VAMP1-206ENST00000538970 IL9P15248 144 aa14.26□□□□□ -0.13
VAMP1-206ENST00000538970 SLC26A2P50443 739 aa14.26□□□□□ -0.13
VAMP1-206ENST00000538970 TMEM62Q0P6H9 643 aa14.26□□□□□ -0.13
VAMP1-206ENST00000538970 COL19A1Q14993 1142 aa14.26□□□□□ -0.13
VAMP1-206ENST00000538970 PFKFB3Q16875 520 aaPredicted RBP14.26□□□□□ -0.13
VAMP1-206ENST00000538970 TCEAL5Q5H9L2 206 aa14.26□□□□□ -0.13
VAMP1-206ENST00000538970 IER5Q5VY09 327 aa14.26□□□□□ -0.13
VAMP1-206ENST00000538970 NIPA1Q7RTP0 329 aa14.26□□□□□ -0.13
VAMP1-206ENST00000538970 NEK9Q8TD19 979 aa14.26□□□□□ -0.13
VAMP1-206ENST00000538970 ZNF689Q96CS4 500 aaPredicted RBP14.26□□□□□ -0.13
VAMP1-206ENST00000538970 NSUN3Q9H649 340 aaKnown RBP14.26□□□□□ -0.13
VAMP1-206ENST00000538970 RWDD3Q9Y3V2 267 aa14.26□□□□□ -0.13
VAMP1-206ENST00000538970 SQORQ9Y6N5 450 aa14.26□□□□□ -0.13
VAMP1-206ENST00000538970 USP34Q70CQ2 3546 aa14.25□□□□□ -0.13
VAMP1-206ENST00000538970 IGSF9BQ9UPX0 1349 aa14.25□□□□□ -0.13
VAMP1-206ENST00000538970 KDM3AQ9Y4C1 1321 aa14.25□□□□□ -0.13
VAMP1-206ENST00000538970 IGLV3-22A0A075B6J6 115 aa14.25□□□□□ -0.13
VAMP1-206ENST00000538970 SMIM35A0A1B0GVV1 85 aa14.25□□□□□ -0.13
VAMP1-206ENST00000538970 POTEB3A0JP26 581 aa14.25□□□□□ -0.13
VAMP1-206ENST00000538970 FAM86B1E9PN63 330 aa14.25□□□□□ -0.13
VAMP1-206ENST00000538970 M0QZ92 97 aa14.25□□□□□ -0.13
VAMP1-206ENST00000538970 DGKIO75912 1065 aa14.25□□□□□ -0.13
VAMP1-206ENST00000538970 RB1P06400 928 aa14.25□□□□□ -0.13
VAMP1-206ENST00000538970 FAM86B2P0C5J1 330 aa14.25□□□□□ -0.13
VAMP1-206ENST00000538970 CPA1P15085 419 aa14.25□□□□□ -0.13
VAMP1-206ENST00000538970 SSTR3P32745 418 aaPredicted RBP14.25□□□□□ -0.13
VAMP1-206ENST00000538970 ADD1P35611 737 aaKnown RBP14.25□□□□□ -0.13
VAMP1-206ENST00000538970 BMPR1AP36894 532 aa14.25□□□□□ -0.13
VAMP1-206ENST00000538970 METAP2P50579 478 aaKnown RBP eCLIP14.25□□□□□ -0.13
VAMP1-206ENST00000538970 POTEBQ6S5H4 581 aa14.25□□□□□ -0.13
VAMP1-206ENST00000538970 CRIPAKQ8N1N5 446 aa14.25□□□□□ -0.13
VAMP1-206ENST00000538970 CRYGNQ8WXF5 182 aa14.25□□□□□ -0.13
VAMP1-206ENST00000538970 KCNB2Q92953 911 aa14.25□□□□□ -0.13
VAMP1-206ENST00000538970 CLP1Q92989 425 aaKnown RBP14.25□□□□□ -0.13
VAMP1-206ENST00000538970 PABPC5Q96DU9 382 aaKnown RBP14.25□□□□□ -0.13
VAMP1-206ENST00000538970 C11orf84Q9BUA3 381 aaPredicted RBP14.25□□□□□ -0.13
VAMP1-206ENST00000538970 FTHL17Q9BXU8 183 aa14.25□□□□□ -0.13
VAMP1-206ENST00000538970 ESYT2A0FGR8 921 aa14.24□□□□□ -0.13
VAMP1-206ENST00000538970 H3BQ06 376 aaPredicted RBP14.24□□□□□ -0.13
VAMP1-206ENST00000538970 DDX39AO00148 427 aaKnown RBP14.24□□□□□ -0.13
VAMP1-206ENST00000538970 SCG2P13521 617 aa14.24□□□□□ -0.13
VAMP1-206ENST00000538970 ZNF76P36508 570 aa14.24□□□□□ -0.13
VAMP1-206ENST00000538970 FGD1P98174 961 aa14.24□□□□□ -0.13
VAMP1-206ENST00000538970 APOBRQ0VD83 1088 aa14.24□□□□□ -0.13
VAMP1-206ENST00000538970 BTG3Q14201 252 aaPredicted RBP14.24□□□□□ -0.13
VAMP1-206ENST00000538970 CSPP1Q1MSJ5 1256 aa14.24□□□□□ -0.13
VAMP1-206ENST00000538970 JAKMIP3Q5VZ66 844 aa14.24□□□□□ -0.13
VAMP1-206ENST00000538970 PTCRAQ6ISU1 281 aaPredicted RBP14.24□□□□□ -0.13
VAMP1-206ENST00000538970 MTHFD1LQ6UB35 978 aa14.24□□□□□ -0.13
VAMP1-206ENST00000538970 ABHD15Q6UXT9 468 aa14.24□□□□□ -0.13
VAMP1-206ENST00000538970 RTN4RL1Q86UN2 441 aaPredicted RBP14.24□□□□□ -0.13
VAMP1-206ENST00000538970 PLA2G4DQ86XP0 818 aa14.24□□□□□ -0.13
VAMP1-206ENST00000538970 CCDC60Q8IWA6 550 aaPredicted RBP14.24□□□□□ -0.13
VAMP1-206ENST00000538970 ATP8B4Q8TF62 1192 aa14.24□□□□□ -0.13
VAMP1-206ENST00000538970 CELF4Q9BZC1 486 aaKnown RBP14.24□□□□□ -0.13
VAMP1-206ENST00000538970 LMAN2LQ9H0V9 348 aa14.24□□□□□ -0.13
VAMP1-206ENST00000538970 NAP1L2Q9ULW6 460 aaPredicted RBP14.24□□□□□ -0.13
VAMP1-206ENST00000538970 PADI3Q9ULW8 664 aa14.24□□□□□ -0.13
VAMP1-206ENST00000538970 KAT6AQ92794 2004 aa14.24□□□□□ -0.13
VAMP1-206ENST00000538970 CCDC196A0A1B0GTZ2 297 aa14.23□□□□□ -0.13
VAMP1-206ENST00000538970 GRXCR2A6NFK2 248 aa14.23□□□□□ -0.13
VAMP1-206ENST00000538970 BACH1O14867 736 aa14.23□□□□□ -0.13
VAMP1-206ENST00000538970 ADAMTS3O15072 1205 aa14.23□□□□□ -0.13
VAMP1-206ENST00000538970 GRM6O15303 877 aa14.23□□□□□ -0.13
VAMP1-206ENST00000538970 DHX15O43143 795 aaKnown RBP14.23□□□□□ -0.13
VAMP1-206ENST00000538970 CYP3A4P08684 503 aa14.23□□□□□ -0.13
VAMP1-206ENST00000538970 HSPA4P34932 840 aa14.23□□□□□ -0.13
VAMP1-206ENST00000538970 PAK2Q13177 524 aa14.23□□□□□ -0.13
VAMP1-206ENST00000538970 PUS10Q3MIT2 529 aaKnown RBP14.23□□□□□ -0.13
VAMP1-206ENST00000538970 FAM160B1Q5W0V3 765 aa14.23□□□□□ -0.13
VAMP1-206ENST00000538970 Q6ZUG5 572 aa14.23□□□□□ -0.13
VAMP1-206ENST00000538970 NPAS4Q8IUM7 802 aa14.23□□□□□ -0.13
VAMP1-206ENST00000538970 CMTR2Q8IYT2 770 aaKnown RBP14.23□□□□□ -0.13
VAMP1-206ENST00000538970 NME8Q8N427 588 aa14.23□□□□□ -0.13
VAMP1-206ENST00000538970 BRF1Q92994 677 aa14.23□□□□□ -0.13
VAMP1-206ENST00000538970 JAKMIP1Q96N16 626 aaKnown RBP14.23□□□□□ -0.13
VAMP1-206ENST00000538970 ZMYND12Q9H0C1 365 aa14.23□□□□□ -0.13
VAMP1-206ENST00000538970 ZNF302Q9NR11 478 aa14.23□□□□□ -0.13
VAMP1-206ENST00000538970 MRPL42Q9Y6G3 142 aaKnown RBP14.23□□□□□ -0.13
VAMP1-206ENST00000538970 ATG2AQ2TAZ0 1938 aa14.23□□□□□ -0.13
VAMP1-206ENST00000538970 COL1A2P08123 1366 aa14.22□□□□□ -0.13
VAMP1-206ENST00000538970 IPO5O00410 1097 aaKnown RBP14.22□□□□□ -0.13
VAMP1-206ENST00000538970 HBP1O60381 514 aa14.22□□□□□ -0.13
VAMP1-206ENST00000538970 MMP1P03956 469 aa14.22□□□□□ -0.13
VAMP1-206ENST00000538970 ALADP13716 330 aa14.22□□□□□ -0.13
VAMP1-206ENST00000538970 KLRC1P26715 233 aa14.22□□□□□ -0.13
VAMP1-206ENST00000538970 SETQ01105 290 aaPredicted RBP14.22□□□□□ -0.13
VAMP1-206ENST00000538970 KRT76Q01546 638 aa14.22□□□□□ -0.13
VAMP1-206ENST00000538970 PKN1Q16512 942 aa14.22□□□□□ -0.13
VAMP1-206ENST00000538970 MCTP2Q6DN12 878 aa14.22□□□□□ -0.13
VAMP1-206ENST00000538970 REXO1Q8N1G1 1221 aaKnown RBP14.22□□□□□ -0.13
VAMP1-206ENST00000538970 CCDC12Q8WUD4 166 aaPredicted RBP14.22□□□□□ -0.13
VAMP1-206ENST00000538970 PLVAPQ9BX97 442 aa14.22□□□□□ -0.13
VAMP1-206ENST00000538970 TMX1Q9H3N1 280 aa14.22□□□□□ -0.13
VAMP1-206ENST00000538970 C6orf50Q9HD87 102 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms