RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 GLG1Q92896 1179 aa14.74□□□□□ -0.05
CHFR-216ENST00000538235 NAP1L4Q99733 375 aaKnown RBP14.74□□□□□ -0.05
CHFR-216ENST00000538235 MMTAG2Q9BU76 263 aaKnown RBP14.74□□□□□ -0.05
CHFR-216ENST00000538235 PPP1R12CQ9BZL4 782 aa14.74□□□□□ -0.05
CHFR-216ENST00000538235 SMARCAD1Q9H4L7 1026 aa14.74□□□□□ -0.05
CHFR-216ENST00000538235 PRDM5Q9NQX1 630 aaPredicted RBP14.74□□□□□ -0.05
CHFR-216ENST00000538235 ERAP1Q9NZ08 941 aa14.74□□□□□ -0.05
CHFR-216ENST00000538235 PSAPP07602 524 aa14.73□□□□□ -0.05
CHFR-216ENST00000538235 HSP90AA1P07900 732 aaKnown RBP14.73□□□□□ -0.05
CHFR-216ENST00000538235 CYP2C18P33260 490 aa14.73□□□□□ -0.05
CHFR-216ENST00000538235 TECP42680 631 aa14.73□□□□□ -0.05
CHFR-216ENST00000538235 PPFIA1Q13136 1202 aa14.73□□□□□ -0.05
CHFR-216ENST00000538235 MBTPS1Q14703 1052 aa14.73□□□□□ -0.05
CHFR-216ENST00000538235 PTGISQ16647 500 aa14.73□□□□□ -0.05
CHFR-216ENST00000538235 PDXDC2PQ6P474 469 aa14.73□□□□□ -0.05
CHFR-216ENST00000538235 ANO5Q75V66 913 aa14.73□□□□□ -0.05
CHFR-216ENST00000538235 SLFN12Q8IYM2 578 aa14.73□□□□□ -0.05
CHFR-216ENST00000538235 ATP8B4Q8TF62 1192 aa14.73□□□□□ -0.05
CHFR-216ENST00000538235 EIF2AK1Q9BQI3 630 aaKnown RBP14.73□□□□□ -0.05
CHFR-216ENST00000538235 LXNQ9BS40 222 aa14.73□□□□□ -0.05
CHFR-216ENST00000538235 KATNAL1Q9BW62 490 aa14.73□□□□□ -0.05
CHFR-216ENST00000538235 SAMM50Q9Y512 469 aa14.73□□□□□ -0.05
CHFR-216ENST00000538235 MBLAC1A4D2B0 266 aaPredicted RBP14.72□□□□□ -0.05
CHFR-216ENST00000538235 SLITRK3O94933 977 aa14.72□□□□□ -0.05
CHFR-216ENST00000538235 OATP04181 439 aa14.72□□□□□ -0.05
CHFR-216ENST00000538235 SFNP31947 248 aa14.72□□□□□ -0.05
CHFR-216ENST00000538235 FXR2P51116 673 aaKnown RBP eCLIP14.72□□□□□ -0.05
CHFR-216ENST00000538235 IGBP1P78318 339 aa14.72□□□□□ -0.05
CHFR-216ENST00000538235 CEBPZQ03701 1054 aaKnown RBP14.72□□□□□ -0.05
CHFR-216ENST00000538235 PTPN11Q06124 597 aaPredicted RBP14.72□□□□□ -0.05
CHFR-216ENST00000538235 EPHA7Q15375 998 aa14.72□□□□□ -0.05
CHFR-216ENST00000538235 TARBP2Q15633 366 aaKnown RBP14.72□□□□□ -0.05
CHFR-216ENST00000538235 USP49Q70CQ1 688 aa14.72□□□□□ -0.05
CHFR-216ENST00000538235 KCNK18Q7Z418 384 aa14.72□□□□□ -0.05
CHFR-216ENST00000538235 SERINC5Q86VE9 423 aa14.72□□□□□ -0.05
CHFR-216ENST00000538235 LINC01465Q8N7H1 131 aa14.72□□□□□ -0.05
CHFR-216ENST00000538235 C7orf31Q8N865 590 aa14.72□□□□□ -0.05
CHFR-216ENST00000538235 IGSF22Q8N9C0 903 aa14.72□□□□□ -0.05
CHFR-216ENST00000538235 RDM1Q8NG50 284 aa14.72□□□□□ -0.05
CHFR-216ENST00000538235 HSD17B14Q9BPX1 270 aa14.72□□□□□ -0.05
CHFR-216ENST00000538235 PRO3102Q9H379 93 aa14.72□□□□□ -0.05
CHFR-216ENST00000538235 ZNF215Q9UL58 517 aaPredicted RBP14.72□□□□□ -0.05
CHFR-216ENST00000538235 PCDHA12Q9UN75 941 aa14.72□□□□□ -0.05
CHFR-216ENST00000538235 MYH11P35749 1972 aa14.72□□□□□ -0.05
CHFR-216ENST00000538235 POTEB3A0JP26 581 aa14.71□□□□□ -0.05
CHFR-216ENST00000538235 C17orf102A2RUQ5 167 aa14.71□□□□□ -0.05
CHFR-216ENST00000538235 C22orf31O95567 290 aa14.71□□□□□ -0.05
CHFR-216ENST00000538235 MAGEA10P43363 369 aaPredicted RBP14.71□□□□□ -0.05
CHFR-216ENST00000538235 NPEPPSP55786 919 aa14.71□□□□□ -0.05
CHFR-216ENST00000538235 MKRN4PQ13434 485 aaPredicted RBP14.71□□□□□ -0.05
CHFR-216ENST00000538235 DRP2Q13474 957 aa14.71□□□□□ -0.05
CHFR-216ENST00000538235 POTEBQ6S5H4 581 aa14.71□□□□□ -0.05
CHFR-216ENST00000538235 POTEGQ6S5H5 508 aa14.71□□□□□ -0.05
CHFR-216ENST00000538235 BADQ92934 168 aa14.71□□□□□ -0.05
CHFR-216ENST00000538235 SCLYQ96I15 445 aa14.71□□□□□ -0.05
CHFR-216ENST00000538235 AZI2Q9H6S1 392 aa14.71□□□□□ -0.05
CHFR-216ENST00000538235 FBXO2Q9UK22 296 aaPredicted RBP14.71□□□□□ -0.05
CHFR-216ENST00000538235 TRPC6Q9Y210 931 aa14.71□□□□□ -0.05
CHFR-216ENST00000538235 MROH7Q68CQ1 1323 aa14.7□□□□□ -0.06
CHFR-216ENST00000538235 DCDC2CA8MYV0 355 aa14.7□□□□□ -0.06
CHFR-216ENST00000538235 MARCKSP29966 332 aaPredicted RBP14.7□□□□□ -0.06
CHFR-216ENST00000538235 PRPHP41219 470 aa14.7□□□□□ -0.06
CHFR-216ENST00000538235 NASPP49321 788 aaPredicted RBP14.7□□□□□ -0.06
CHFR-216ENST00000538235 CCL23P55773 120 aa14.7□□□□□ -0.06
CHFR-216ENST00000538235 MDM2Q00987 491 aaPredicted RBP14.7□□□□□ -0.06
CHFR-216ENST00000538235 DNM1Q05193 864 aaKnown RBP14.7□□□□□ -0.06
CHFR-216ENST00000538235 RBL2Q08999 1139 aa14.7□□□□□ -0.06
CHFR-216ENST00000538235 BECN1Q14457 450 aa14.7□□□□□ -0.06
CHFR-216ENST00000538235 FAM160B1Q5W0V3 765 aa14.7□□□□□ -0.06
CHFR-216ENST00000538235 C16orf59Q7L2K0 433 aa14.7□□□□□ -0.06
CHFR-216ENST00000538235 CATSPER3Q86XQ3 398 aa14.7□□□□□ -0.06
CHFR-216ENST00000538235 ATP6V0A1Q93050 837 aa14.7□□□□□ -0.06
CHFR-216ENST00000538235 PNMA5Q96PV4 448 aa14.7□□□□□ -0.06
CHFR-216ENST00000538235 TMEM39AQ9NV64 488 aa14.7□□□□□ -0.06
CHFR-216ENST00000538235 TFIP11Q9UBB9 837 aaKnown RBP14.7□□□□□ -0.06
CHFR-216ENST00000538235 TUBE1Q9UJT0 475 aa14.7□□□□□ -0.06
CHFR-216ENST00000538235 RBM19Q9Y4C8 960 aaKnown RBP14.7□□□□□ -0.06
CHFR-216ENST00000538235 COL4A6Q14031 1691 aa14.7□□□□□ -0.06
CHFR-216ENST00000538235 NRCAMQ92823 1304 aa14.69□□□□□ -0.06
CHFR-216ENST00000538235 LAMA2P24043 3122 aaKnown RBP14.69□□□□□ -0.06
CHFR-216ENST00000538235 VWA3AA6NCI4 1184 aa14.69□□□□□ -0.06
CHFR-216ENST00000538235 BAG4O95429 457 aaKnown RBP14.69□□□□□ -0.06
CHFR-216ENST00000538235 QARSP47897 775 aaKnown RBP14.69□□□□□ -0.06
CHFR-216ENST00000538235 PSMC5P62195 406 aa14.69□□□□□ -0.06
CHFR-216ENST00000538235 MGAT3Q09327 533 aa14.69□□□□□ -0.06
CHFR-216ENST00000538235 ZNF618Q5T7W0 954 aa14.69□□□□□ -0.06
CHFR-216ENST00000538235 MTHFD1LQ6UB35 978 aa14.69□□□□□ -0.06
CHFR-216ENST00000538235 BBXQ8WY36 941 aaPredicted RBP14.69□□□□□ -0.06
CHFR-216ENST00000538235 CLIC6Q96NY7 704 aa14.69□□□□□ -0.06
CHFR-216ENST00000538235 GDF15Q99988 308 aa14.69□□□□□ -0.06
CHFR-216ENST00000538235 HIPK3Q9H422 1215 aa14.69□□□□□ -0.06
CHFR-216ENST00000538235 BMP2KQ9NSY1 1161 aaPredicted RBP14.69□□□□□ -0.06
CHFR-216ENST00000538235 DAXXQ9UER7 740 aaPredicted RBP14.69□□□□□ -0.06
CHFR-216ENST00000538235 SEPT9Q9UHD8 586 aaPredicted RBP14.69□□□□□ -0.06
CHFR-216ENST00000538235 COL1A2P08123 1366 aa14.69□□□□□ -0.06
CHFR-216ENST00000538235 LAMA3Q16787 3333 aa14.69□□□□□ -0.06
CHFR-216ENST00000538235 TRIOBPQ9H2D6 2365 aa14.68□□□□□ -0.06
CHFR-216ENST00000538235 HBP1O60381 514 aa14.68□□□□□ -0.06
CHFR-216ENST00000538235 TIMP1P01033 207 aa14.68□□□□□ -0.06
CHFR-216ENST00000538235 P4HBP07237 508 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms