RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 POTEB2H3BUK9 544 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 SPDYE6P0CI01 402 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 AMPD2Q01433 879 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 AP3B2Q13367 1082 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 MAPK8IP2Q13387 824 aaPredicted RBP9.55□□□□□ -0.88
UBE3B-208ENST00000538070 TAF3Q5VWG9 929 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 ETNPPLQ8TBG4 499 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 TAF4BQ92750 862 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 SH2D4AQ9H788 454 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 DMGDHQ9UI17 866 aaKnown RBP9.55□□□□□ -0.88
UBE3B-208ENST00000538070 LAMB1P07942 1786 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 ZSCAN5CA6NGD5 496 aaPredicted RBP9.55□□□□□ -0.88
UBE3B-208ENST00000538070 NFIBO00712 420 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 KCNK3O14649 394 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 OPLAHO14841 1288 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 CALUO43852 315 aaPredicted RBP9.55□□□□□ -0.88
UBE3B-208ENST00000538070 TLR2O60603 784 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 FOSP01100 380 aaPredicted RBP9.55□□□□□ -0.88
UBE3B-208ENST00000538070 RPA1P27694 616 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 INPP5BP32019 993 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 HLTFQ14527 1009 aaKnown RBP eCLIP9.55□□□□□ -0.88
UBE3B-208ENST00000538070 TATDN1Q6P1N9 297 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 RSBN1LQ6PCB5 846 aaPredicted RBP9.55□□□□□ -0.88
UBE3B-208ENST00000538070 CHURC1Q8WUH1 139 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 BAP1Q92560 729 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 OSBPL9Q96SU4 736 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 NAP1L4Q99733 375 aaKnown RBP9.55□□□□□ -0.88
UBE3B-208ENST00000538070 TSGA10Q9BZW7 698 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 GBP3Q9H0R5 595 aa9.55□□□□□ -0.88
UBE3B-208ENST00000538070 ANKRD65E5RJM6 399 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 CEP104O60308 925 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 EGFRP00533 1210 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 AFPP02771 609 aaKnown RBP9.54□□□□□ -0.88
UBE3B-208ENST00000538070 CAPN2P17655 700 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 USP14P54578 494 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 SF3B2Q13435 895 aaKnown RBP9.54□□□□□ -0.88
UBE3B-208ENST00000538070 GRIPAP1Q4V328 841 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 RINT1Q6NUQ1 792 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 SAMD7Q7Z3H4 446 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 MIER3Q7Z3K6 550 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 FAM186BQ8IYM0 893 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 FAM84AQ96KN4 292 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 WDR11Q9BZH6 1224 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 TRIM31Q9BZY9 425 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 JRKLQ9Y4A0 524 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 ADAMTSL1Q8N6G6 1762 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 CCDC169A6NNP5 214 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 NOL4O94818 638 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 SREBF1P36956 1147 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 NOVP48745 357 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 PTK2Q05397 1052 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 HS2ST1Q7LGA3 356 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 MKL1Q969V6 931 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 CCDC127Q96BQ5 260 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 KRT12Q99456 494 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 LXNQ9BS40 222 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 AP1M1Q9BXS5 423 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 LUC7LQ9NQ29 371 aaKnown RBP9.54□□□□□ -0.88
UBE3B-208ENST00000538070 ADAM21Q9UKJ8 722 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 ASTN2O75129 1339 aaPredicted RBP9.54□□□□□ -0.88
UBE3B-208ENST00000538070 K7ENM7 598 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 IPO5O00410 1097 aaKnown RBP9.54□□□□□ -0.88
UBE3B-208ENST00000538070 PPP1R12BO60237 982 aaPredicted RBP9.54□□□□□ -0.88
UBE3B-208ENST00000538070 ORC2Q13416 577 aaPredicted RBP9.54□□□□□ -0.88
UBE3B-208ENST00000538070 RASA3Q14644 834 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 C8orf74Q6P047 294 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 PAXIP1Q6ZW49 1069 aaPredicted RBP9.54□□□□□ -0.88
UBE3B-208ENST00000538070 IL31RAQ8NI17 732 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 JDP2Q8WYK2 163 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 LENG9Q96B70 501 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 RUFY1Q96T51 708 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 CEP72Q9P209 647 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 SNX12Q9UMY4 172 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 PLIN4Q96Q06 1357 aa9.54□□□□□ -0.88
UBE3B-208ENST00000538070 PLSCR1O15162 318 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 SLITRK3O94933 977 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 SERPING1P05155 500 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 RPL13P26373 211 aaKnown RBP9.53□□□□□ -0.88
UBE3B-208ENST00000538070 SOX10P56693 466 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 CEP55Q53EZ4 464 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 STYK1Q6J9G0 422 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 TRIM59Q8IWR1 403 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 SYT2Q8N9I0 419 aaPredicted RBP9.53□□□□□ -0.88
UBE3B-208ENST00000538070 KCTD10Q9H3F6 313 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 UNC45AQ9H3U1 944 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 GPRC5CQ9NQ84 441 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 RBM12Q9NTZ6 932 aaKnown RBP9.53□□□□□ -0.88
UBE3B-208ENST00000538070 USP20Q9Y2K6 914 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 ECM2O94769 699 aaPredicted RBP9.53□□□□□ -0.88
UBE3B-208ENST00000538070 UCHL3P15374 230 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 GUCY2DQ02846 1103 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 MKRN4PQ13434 485 aaPredicted RBP9.53□□□□□ -0.88
UBE3B-208ENST00000538070 PHLDB2Q86SQ0 1253 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 SPATA4Q8NEY3 305 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 FAM20AQ96MK3 541 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 KIFC3Q9BVG8 833 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 PARVGQ9HBI0 331 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 WRAP73Q9P2S5 460 aaPredicted RBP9.53□□□□□ -0.88
UBE3B-208ENST00000538070 L1RE1Q9UN81 338 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 MRPL11Q9Y3B7 192 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms