RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 MSH4O15457 936 aa15.69■□□□□ 0.1
USP44-203ENST00000537435 NPR1P16066 1061 aa15.69■□□□□ 0.1
USP44-203ENST00000537435 RBM5P52756 815 aaKnown RBP eCLIP15.69■□□□□ 0.1
USP44-203ENST00000537435 TCERG1LQ5VWI1 586 aa15.69■□□□□ 0.1
USP44-203ENST00000537435 MCTP2Q6DN12 878 aa15.69■□□□□ 0.1
USP44-203ENST00000537435 DNAAF5Q86Y56 855 aa15.69■□□□□ 0.1
USP44-203ENST00000537435 ARL8AQ96BM9 186 aa15.69■□□□□ 0.1
USP44-203ENST00000537435 FAM20AQ96MK3 541 aa15.69■□□□□ 0.1
USP44-203ENST00000537435 ZIM3Q96PE6 472 aa15.69■□□□□ 0.1
USP44-203ENST00000537435 RASSF4Q9H2L5 321 aa15.69■□□□□ 0.1
USP44-203ENST00000537435 BHMT2Q9H2M3 363 aa15.69■□□□□ 0.1
USP44-203ENST00000537435 BCAS3Q9H6U6 928 aa15.69■□□□□ 0.1
USP44-203ENST00000537435 BTNL10A8MVZ5 291 aa15.69■□□□□ 0.1
USP44-203ENST00000537435 NDUFB10O96000 172 aa15.69■□□□□ 0.1
USP44-203ENST00000537435 FOSP01100 380 aaPredicted RBP15.69■□□□□ 0.1
USP44-203ENST00000537435 FAM153BP0C7A2 387 aa15.69■□□□□ 0.1
USP44-203ENST00000537435 EPB41P11171 864 aaKnown RBP15.69■□□□□ 0.1
USP44-203ENST00000537435 PAK2Q13177 524 aa15.69■□□□□ 0.1
USP44-203ENST00000537435 FAM153CQ494X1 144 aa15.69■□□□□ 0.1
USP44-203ENST00000537435 TTMPQ5BVD1 217 aa15.69■□□□□ 0.1
USP44-203ENST00000537435 C10orf76Q5T2E6 689 aa15.69■□□□□ 0.1
USP44-203ENST00000537435 TATDN1Q6P1N9 297 aa15.69■□□□□ 0.1
USP44-203ENST00000537435 TMEM179Q6ZVK1 233 aa15.69■□□□□ 0.1
USP44-203ENST00000537435 RBM46Q8TBY0 533 aaKnown RBP15.69■□□□□ 0.1
USP44-203ENST00000537435 TAF4BQ92750 862 aa15.69■□□□□ 0.1
USP44-203ENST00000537435 TYW1Q9NV66 732 aaKnown RBP15.69■□□□□ 0.1
USP44-203ENST00000537435 TMEM51Q9NW97 253 aa15.69■□□□□ 0.1
USP44-203ENST00000537435 FAM153AQ9UHL3 310 aa15.69■□□□□ 0.1
USP44-203ENST00000537435 BZW2Q9Y6E2 419 aaKnown RBP15.69■□□□□ 0.1
USP44-203ENST00000537435 ASTN1O14525 1302 aa15.68■□□□□ 0.1
USP44-203ENST00000537435 ONECUT3O60422 494 aaPredicted RBP15.68■□□□□ 0.1
USP44-203ENST00000537435 GCNT3O95395 438 aa15.68■□□□□ 0.1
USP44-203ENST00000537435 NR3C1P04150 777 aa15.68■□□□□ 0.1
USP44-203ENST00000537435 HOXA13P31271 388 aaPredicted RBP15.68■□□□□ 0.1
USP44-203ENST00000537435 CASP4P49662 377 aa15.68■□□□□ 0.1
USP44-203ENST00000537435 IRAK1P51617 712 aa15.68■□□□□ 0.1
USP44-203ENST00000537435 EPHA7Q15375 998 aa15.68■□□□□ 0.1
USP44-203ENST00000537435 RPS6KA1Q15418 735 aa15.68■□□□□ 0.1
USP44-203ENST00000537435 SKIDA1Q1XH10 827 aa15.68■□□□□ 0.1
USP44-203ENST00000537435 SYDE2Q5VT97 1194 aa15.68■□□□□ 0.1
USP44-203ENST00000537435 USP38Q8NB14 1042 aa15.68■□□□□ 0.1
USP44-203ENST00000537435 CYP2W1Q8TAV3 490 aa15.68■□□□□ 0.1
USP44-203ENST00000537435 CCDC43Q96MW1 224 aaKnown RBP15.68■□□□□ 0.1
USP44-203ENST00000537435 RUSC1Q9BVN2 902 aa15.68■□□□□ 0.1
USP44-203ENST00000537435 CAPS2Q9BXY5 557 aa15.68■□□□□ 0.1
USP44-203ENST00000537435 VAV3Q9UKW4 847 aa15.68■□□□□ 0.1
USP44-203ENST00000537435 SPATA31A6Q5VVP1 1343 aa15.68■□□□□ 0.1
USP44-203ENST00000537435 KCNK3O14649 394 aa15.68■□□□□ 0.1
USP44-203ENST00000537435 CLIC2O15247 247 aa15.68■□□□□ 0.1
USP44-203ENST00000537435 TBCAO75347 108 aaKnown RBP15.68■□□□□ 0.1
USP44-203ENST00000537435 CIITAP33076 1130 aa15.68■□□□□ 0.1
USP44-203ENST00000537435 NOP2P46087 812 aaKnown RBP15.68■□□□□ 0.1
USP44-203ENST00000537435 BMT2Q1RMZ1 405 aa15.68■□□□□ 0.1
USP44-203ENST00000537435 MEX3CQ5U5Q3 659 aaKnown RBP15.68■□□□□ 0.1
USP44-203ENST00000537435 ALKBH5Q6P6C2 394 aaKnown RBP15.68■□□□□ 0.1
USP44-203ENST00000537435 PODNQ7Z5L7 613 aa15.68■□□□□ 0.1
USP44-203ENST00000537435 CASKIN2Q8WXE0 1202 aa15.68■□□□□ 0.1
USP44-203ENST00000537435 IDI2Q9BXS1 227 aa15.68■□□□□ 0.1
USP44-203ENST00000537435 TMX4Q9H1E5 349 aaPredicted RBP15.68■□□□□ 0.1
USP44-203ENST00000537435 GOLPH3Q9H4A6 298 aa15.68■□□□□ 0.1
USP44-203ENST00000537435 NAGPAQ9UK23 515 aa15.68■□□□□ 0.1
USP44-203ENST00000537435 STK24Q9Y6E0 443 aa15.68■□□□□ 0.1
USP44-203ENST00000537435 EML1O00423 815 aa15.67■□□□□ 0.1
USP44-203ENST00000537435 RPL13P26373 211 aaKnown RBP15.67■□□□□ 0.1
USP44-203ENST00000537435 ALDH1B1P30837 517 aa15.67■□□□□ 0.1
USP44-203ENST00000537435 MMP14P50281 582 aa15.67■□□□□ 0.1
USP44-203ENST00000537435 KCNA1Q09470 495 aa15.67■□□□□ 0.1
USP44-203ENST00000537435 ABCB5Q2M3G0 1257 aa15.67■□□□□ 0.1
USP44-203ENST00000537435 GBP6Q6ZN66 633 aa15.67■□□□□ 0.1
USP44-203ENST00000537435 KLHL7Q8IXQ5 586 aa15.67■□□□□ 0.1
USP44-203ENST00000537435 EIF2AK1Q9BQI3 630 aaKnown RBP15.67■□□□□ 0.1
USP44-203ENST00000537435 METTL14Q9HCE5 456 aaKnown RBP15.67■□□□□ 0.1
USP44-203ENST00000537435 RGL1Q9NZL6 768 aa15.67■□□□□ 0.1
USP44-203ENST00000537435 AJAP1Q9UKB5 411 aaPredicted RBP15.67■□□□□ 0.1
USP44-203ENST00000537435 RABGAP1Q9Y3P9 1069 aa15.67■□□□□ 0.1
USP44-203ENST00000537435 ATAD5Q96QE3 1844 aa15.67■□□□□ 0.1
USP44-203ENST00000537435 OPLAHO14841 1288 aa15.67■□□□□ 0.1
USP44-203ENST00000537435 RAD51CO43502 376 aa15.67■□□□□ 0.1
USP44-203ENST00000537435 KIF4AO95239 1232 aa15.67■□□□□ 0.1
USP44-203ENST00000537435 ZNF76P36508 570 aa15.67■□□□□ 0.1
USP44-203ENST00000537435 GUCY2FP51841 1108 aa15.67■□□□□ 0.1
USP44-203ENST00000537435 TNNC1P63316 161 aa15.67■□□□□ 0.1
USP44-203ENST00000537435 DNAJC21Q5F1R6 531 aaKnown RBP15.67■□□□□ 0.1
USP44-203ENST00000537435 GMCL1P1Q8NEA9 526 aa15.67■□□□□ 0.1
USP44-203ENST00000537435 SLC35C1Q96A29 364 aa15.67■□□□□ 0.1
USP44-203ENST00000537435 GMCL1Q96IK5 515 aa15.67■□□□□ 0.1
USP44-203ENST00000537435 SIX2Q9NPC8 291 aa15.67■□□□□ 0.1
USP44-203ENST00000537435 PCDHB13Q9Y5F0 798 aa15.67■□□□□ 0.1
USP44-203ENST00000537435 SIPA1L1O43166 1804 aa15.66■□□□□ 0.1
USP44-203ENST00000537435 SFI1A8K8P3 1242 aa15.66■□□□□ 0.1
USP44-203ENST00000537435 SLC16A3O15427 465 aaKnown RBP15.66■□□□□ 0.1
USP44-203ENST00000537435 EYA4O95677 639 aa15.66■□□□□ 0.1
USP44-203ENST00000537435 KRT14P02533 472 aa15.66■□□□□ 0.1
USP44-203ENST00000537435 PRKCIP41743 596 aa15.66■□□□□ 0.1
USP44-203ENST00000537435 GNGT1P63211 74 aa15.66■□□□□ 0.1
USP44-203ENST00000537435 SLC20A2Q08357 652 aa15.66■□□□□ 0.1
USP44-203ENST00000537435 TRADDQ15628 312 aa15.66■□□□□ 0.1
USP44-203ENST00000537435 IFI16Q16666 785 aaKnown RBP15.66■□□□□ 0.1
USP44-203ENST00000537435 PTPROQ16827 1216 aa15.66■□□□□ 0.1
USP44-203ENST00000537435 CFAP58Q5T655 872 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms