RNA–Protein interactions for RNA: ENST00000537103.2

IFT88-207, Transcript of intraflagellar transport 88, humanhuman

TSL 5

Gene IFT88, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-207ENST00000537103 VAV3Q9UKW4 847 aa7.41□□□□□ -1.22
IFT88-207ENST00000537103 hCG_1642624A0A1W2PR95 340 aa7.4□□□□□ -1.22
IFT88-207ENST00000537103 FAM86B1E9PN63 330 aa7.4□□□□□ -1.22
IFT88-207ENST00000537103 IPO5O00410 1097 aaKnown RBP7.4□□□□□ -1.22
IFT88-207ENST00000537103 MSH4O15457 936 aa7.4□□□□□ -1.22
IFT88-207ENST00000537103 FAM86B2P0C5J1 330 aa7.4□□□□□ -1.22
IFT88-207ENST00000537103 SUPT20HL2P0C7V6 817 aa7.4□□□□□ -1.22
IFT88-207ENST00000537103 GNAT1P11488 350 aa7.4□□□□□ -1.22
IFT88-207ENST00000537103 CCND3P30281 292 aaPredicted RBP7.4□□□□□ -1.22
IFT88-207ENST00000537103 ABCD1P33897 745 aa7.4□□□□□ -1.22
IFT88-207ENST00000537103 ZNF211Q13398 564 aaPredicted RBP7.4□□□□□ -1.22
IFT88-207ENST00000537103 LRRC41Q15345 812 aa7.4□□□□□ -1.22
IFT88-207ENST00000537103 CALCRLQ16602 461 aa7.4□□□□□ -1.22
IFT88-207ENST00000537103 FSCN1Q16658 493 aaKnown RBP7.4□□□□□ -1.22
IFT88-207ENST00000537103 ZNF484Q5JVG2 852 aa7.4□□□□□ -1.22
IFT88-207ENST00000537103 HAUS3Q68CZ6 603 aa7.4□□□□□ -1.22
IFT88-207ENST00000537103 ABHD15Q6UXT9 468 aa7.4□□□□□ -1.22
IFT88-207ENST00000537103 FBXO16Q8IX29 292 aaPredicted RBP7.4□□□□□ -1.22
IFT88-207ENST00000537103 DEPDC4Q8N2C3 294 aa7.4□□□□□ -1.22
IFT88-207ENST00000537103 U2AF1L4Q8WU68 220 aaKnown RBP7.4□□□□□ -1.22
IFT88-207ENST00000537103 LRRN4Q8WUT4 740 aa7.4□□□□□ -1.22
IFT88-207ENST00000537103 ATP6V0A1Q93050 837 aa7.4□□□□□ -1.22
IFT88-207ENST00000537103 ANKEF1Q9NU02 776 aa7.4□□□□□ -1.22
IFT88-207ENST00000537103 KCND2Q9NZV8 630 aa7.4□□□□□ -1.22
IFT88-207ENST00000537103 CHMP5Q9NZZ3 219 aa7.4□□□□□ -1.22
IFT88-207ENST00000537103 SQORQ9Y6N5 450 aa7.4□□□□□ -1.22
IFT88-207ENST00000537103 FAM237AA0A1B0GTK4 181 aa7.4□□□□□ -1.23
IFT88-207ENST00000537103 SCAMP3O14828 347 aaKnown RBP7.4□□□□□ -1.23
IFT88-207ENST00000537103 PEX10O60683 326 aa7.4□□□□□ -1.23
IFT88-207ENST00000537103 MYCLP12524 364 aaPredicted RBP7.4□□□□□ -1.23
IFT88-207ENST00000537103 ELNP15502 786 aa7.4□□□□□ -1.23
IFT88-207ENST00000537103 ATP2B1P20020 1258 aa7.4□□□□□ -1.23
IFT88-207ENST00000537103 MAPK1P28482 360 aa7.4□□□□□ -1.23
IFT88-207ENST00000537103 ADCYAP1R1P41586 468 aa7.4□□□□□ -1.23
IFT88-207ENST00000537103 INF2Q27J81 1249 aa7.4□□□□□ -1.23
IFT88-207ENST00000537103 FOXD4L6Q3SYB3 417 aaPredicted RBP7.4□□□□□ -1.23
IFT88-207ENST00000537103 FOXD4L3Q6VB84 417 aaPredicted RBP7.4□□□□□ -1.23
IFT88-207ENST00000537103 ANKRD33Q7Z3H0 272 aa7.4□□□□□ -1.23
IFT88-207ENST00000537103 C4orf19Q8IY42 314 aa7.4□□□□□ -1.23
IFT88-207ENST00000537103 ELOA2Q8IYF1 753 aaPredicted RBP7.4□□□□□ -1.23
IFT88-207ENST00000537103 CCDC155Q8N6L0 562 aa7.4□□□□□ -1.23
IFT88-207ENST00000537103 IGSF22Q8N9C0 903 aa7.4□□□□□ -1.23
IFT88-207ENST00000537103 FAM161BQ96MY7 647 aa7.4□□□□□ -1.23
IFT88-207ENST00000537103 NIFKQ9BYG3 293 aaKnown RBP7.4□□□□□ -1.23
IFT88-207ENST00000537103 CUEDC2Q9H467 287 aa7.4□□□□□ -1.23
IFT88-207ENST00000537103 PCDHA10Q9Y5I2 948 aa7.4□□□□□ -1.23
IFT88-207ENST00000537103 KIF28PB7ZC32 967 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 CCNT1O60563 726 aaKnown RBP7.39□□□□□ -1.23
IFT88-207ENST00000537103 GAS7O60861 476 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 GGPS1O95749 300 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 RFC2P35250 354 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 NR5A1Q13285 461 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 SLC39A14Q15043 492 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 LRCH2Q5VUJ6 765 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 TMEM87AQ8NBN3 555 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 PIBF1Q8WXW3 757 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 RSPH1Q8WYR4 309 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 HTATIP2Q9BUP3 242 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 CCSER1Q9C0I3 900 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 SCAND2PQ9GZW5 306 aaPredicted RBP7.39□□□□□ -1.23
IFT88-207ENST00000537103 NT5C3AQ9H0P0 336 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 RNF208Q9H0X6 261 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 C11orf49Q9H6J7 331 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 MLXIPQ9HAP2 919 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 DBR1Q9UK59 544 aaKnown RBP7.39□□□□□ -1.23
IFT88-207ENST00000537103 RCOR1Q9UKL0 485 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 SRPRBQ9Y5M8 271 aaKnown RBP7.39□□□□□ -1.23
IFT88-207ENST00000537103 PPP1R3GB7ZBB8 358 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 H3BRB1 525 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 TLR3O15455 904 aaKnown RBP7.39□□□□□ -1.23
IFT88-207ENST00000537103 P4HBP07237 508 aaKnown RBP7.39□□□□□ -1.23
IFT88-207ENST00000537103 PTMSP20962 102 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 CDK7P50613 346 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 TOB1P50616 345 aaPredicted RBP7.39□□□□□ -1.23
IFT88-207ENST00000537103 PURAQ00577 322 aaKnown RBP7.39□□□□□ -1.23
IFT88-207ENST00000537103 SPIRE1Q08AE8 756 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 PTPAQ15257 358 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 PCBP1Q15365 356 aaKnown RBP eCLIP7.39□□□□□ -1.23
IFT88-207ENST00000537103 LETM2Q2VYF4 491 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 ANO1Q5XXA6 986 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 CNNM4Q6P4Q7 775 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 NECAB2Q7Z6G3 386 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 TNS4Q8IZW8 715 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 SH3TC2Q8TF17 1288 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 GTPBP4Q9BZE4 634 aaKnown RBP7.39□□□□□ -1.23
IFT88-207ENST00000537103 LRRC27Q9C0I9 530 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 TUT1Q9H6E5 874 aaKnown RBP7.39□□□□□ -1.23
IFT88-207ENST00000537103 CAPN10Q9HC96 672 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 ERAP1Q9NZ08 941 aa7.39□□□□□ -1.23
IFT88-207ENST00000537103 DMGDHQ9UI17 866 aaKnown RBP7.39□□□□□ -1.23
IFT88-207ENST00000537103 GSTTP1A0A1W2PQM5 241 aa7.38□□□□□ -1.23
IFT88-207ENST00000537103 MAGEB2O15479 319 aa7.38□□□□□ -1.23
IFT88-207ENST00000537103 HBP1O60381 514 aa7.38□□□□□ -1.23
IFT88-207ENST00000537103 EVI5O60447 810 aa7.38□□□□□ -1.23
IFT88-207ENST00000537103 CUTAO60888 179 aa7.38□□□□□ -1.23
IFT88-207ENST00000537103 ARIH2O95376 493 aa7.38□□□□□ -1.23
IFT88-207ENST00000537103 ARP10275 920 aa7.38□□□□□ -1.23
IFT88-207ENST00000537103 SLC4A3P48751 1232 aa7.38□□□□□ -1.23
IFT88-207ENST00000537103 ACLYP53396 1101 aa7.38□□□□□ -1.23
IFT88-207ENST00000537103 PSMC5P62195 406 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms