RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 BTG3Q14201 252 aaPredicted RBP22.41■■□□□ 1.18
TNFRSF1B-204ENST00000536782 PUS10Q3MIT2 529 aaKnown RBP22.41■■□□□ 1.18
TNFRSF1B-204ENST00000536782 PTCRAQ6ISU1 281 aaPredicted RBP22.41■■□□□ 1.18
TNFRSF1B-204ENST00000536782 NIPA1Q7RTP0 329 aa22.41■■□□□ 1.18
TNFRSF1B-204ENST00000536782 ZNF689Q96CS4 500 aaPredicted RBP22.41■■□□□ 1.18
TNFRSF1B-204ENST00000536782 C11orf16Q9NQ32 467 aa22.41■■□□□ 1.18
TNFRSF1B-204ENST00000536782 SMIM35A0A1B0GVV1 85 aa22.4■■□□□ 1.18
TNFRSF1B-204ENST00000536782 DDX39AO00148 427 aaKnown RBP22.4■■□□□ 1.18
TNFRSF1B-204ENST00000536782 DGKIO75912 1065 aa22.4■■□□□ 1.18
TNFRSF1B-204ENST00000536782 LINC00271P0C7V0 271 aa22.4■■□□□ 1.18
TNFRSF1B-204ENST00000536782 ADD1P35611 737 aaKnown RBP22.4■■□□□ 1.18
TNFRSF1B-204ENST00000536782 METAP2P50579 478 aaKnown RBP eCLIP22.4■■□□□ 1.18
TNFRSF1B-204ENST00000536782 PFKFB3Q16875 520 aaPredicted RBP22.4■■□□□ 1.18
TNFRSF1B-204ENST00000536782 JAKMIP3Q5VZ66 844 aa22.4■■□□□ 1.18
TNFRSF1B-204ENST00000536782 FAM160B1Q5W0V3 765 aa22.4■■□□□ 1.18
TNFRSF1B-204ENST00000536782 MTHFD1LQ6UB35 978 aa22.4■■□□□ 1.18
TNFRSF1B-204ENST00000536782 PLA2G4DQ86XP0 818 aa22.4■■□□□ 1.18
TNFRSF1B-204ENST00000536782 NME8Q8N427 588 aa22.4■■□□□ 1.18
TNFRSF1B-204ENST00000536782 NEK9Q8TD19 979 aa22.4■■□□□ 1.18
TNFRSF1B-204ENST00000536782 CLP1Q92989 425 aaKnown RBP22.4■■□□□ 1.18
TNFRSF1B-204ENST00000536782 PABPC5Q96DU9 382 aaKnown RBP22.4■■□□□ 1.18
TNFRSF1B-204ENST00000536782 CELF4Q9BZC1 486 aaKnown RBP22.4■■□□□ 1.18
TNFRSF1B-204ENST00000536782 LMAN2LQ9H0V9 348 aa22.4■■□□□ 1.18
TNFRSF1B-204ENST00000536782 TRIOO75962 3097 aa22.39■■□□□ 1.18
TNFRSF1B-204ENST00000536782 IGSF9BQ9UPX0 1349 aa22.39■■□□□ 1.18
TNFRSF1B-204ENST00000536782 KIAA1671Q9BY89 1806 aa22.39■■□□□ 1.17
TNFRSF1B-204ENST00000536782 IGKV6D-21A0A0A0MT36 114 aa22.39■■□□□ 1.17
TNFRSF1B-204ENST00000536782 BACH1O14867 736 aa22.39■■□□□ 1.17
TNFRSF1B-204ENST00000536782 CCNE2O96020 404 aa22.39■■□□□ 1.17
TNFRSF1B-204ENST00000536782 SCG2P13521 617 aa22.39■■□□□ 1.17
TNFRSF1B-204ENST00000536782 IL9P15248 144 aa22.39■■□□□ 1.17
TNFRSF1B-204ENST00000536782 PAK2Q13177 524 aa22.39■■□□□ 1.17
TNFRSF1B-204ENST00000536782 ABHD15Q6UXT9 468 aa22.39■■□□□ 1.17
TNFRSF1B-204ENST00000536782 EP400NLQ6ZTU2 488 aa22.39■■□□□ 1.17
TNFRSF1B-204ENST00000536782 RTN4RL1Q86UN2 441 aaPredicted RBP22.39■■□□□ 1.17
TNFRSF1B-204ENST00000536782 FAM178BQ8IXR5 827 aa22.39■■□□□ 1.17
TNFRSF1B-204ENST00000536782 LINC01599Q8WXQ3 324 aa22.39■■□□□ 1.17
TNFRSF1B-204ENST00000536782 LRFN3Q9BTN0 628 aa22.39■■□□□ 1.17
TNFRSF1B-204ENST00000536782 PADI3Q9ULW8 664 aa22.39■■□□□ 1.17
TNFRSF1B-204ENST00000536782 MUC6Q6W4X9 2439 aa22.39■■□□□ 1.17
TNFRSF1B-204ENST00000536782 KDM3AQ9Y4C1 1321 aa22.38■■□□□ 1.17
TNFRSF1B-204ENST00000536782 GRXCR2A6NFK2 248 aa22.38■■□□□ 1.17
TNFRSF1B-204ENST00000536782 FAM86B1E9PN63 330 aa22.38■■□□□ 1.17
TNFRSF1B-204ENST00000536782 H3BQ06 376 aaPredicted RBP22.38■■□□□ 1.17
TNFRSF1B-204ENST00000536782 HBP1O60381 514 aa22.38■■□□□ 1.17
TNFRSF1B-204ENST00000536782 CYP3A4P08684 503 aa22.38■■□□□ 1.17
TNFRSF1B-204ENST00000536782 FAM86B2P0C5J1 330 aa22.38■■□□□ 1.17
TNFRSF1B-204ENST00000536782 CPA1P15085 419 aa22.38■■□□□ 1.17
TNFRSF1B-204ENST00000536782 KRT76Q01546 638 aa22.38■■□□□ 1.17
TNFRSF1B-204ENST00000536782 APOBRQ0VD83 1088 aa22.38■■□□□ 1.17
TNFRSF1B-204ENST00000536782 MCTP2Q6DN12 878 aa22.38■■□□□ 1.17
TNFRSF1B-204ENST00000536782 Q6ZUG5 572 aa22.38■■□□□ 1.17
TNFRSF1B-204ENST00000536782 ATP8B4Q8TF62 1192 aa22.38■■□□□ 1.17
TNFRSF1B-204ENST00000536782 CCDC12Q8WUD4 166 aaPredicted RBP22.38■■□□□ 1.17
TNFRSF1B-204ENST00000536782 ESYT2A0FGR8 921 aa22.37■■□□□ 1.17
TNFRSF1B-204ENST00000536782 IPO5O00410 1097 aaKnown RBP22.37■■□□□ 1.17
TNFRSF1B-204ENST00000536782 GRM6O15303 877 aa22.37■■□□□ 1.17
TNFRSF1B-204ENST00000536782 NCK2O43639 380 aa22.37■■□□□ 1.17
TNFRSF1B-204ENST00000536782 STAG3L1P0CL83 205 aa22.37■■□□□ 1.17
TNFRSF1B-204ENST00000536782 KLRC1P26715 233 aa22.37■■□□□ 1.17
TNFRSF1B-204ENST00000536782 COL19A1Q14993 1142 aa22.37■■□□□ 1.17
TNFRSF1B-204ENST00000536782 TMEM31Q5JXX7 168 aa22.37■■□□□ 1.17
TNFRSF1B-204ENST00000536782 MIS18BP1Q6P0N0 1132 aa22.37■■□□□ 1.17
TNFRSF1B-204ENST00000536782 NPAS4Q8IUM7 802 aa22.37■■□□□ 1.17
TNFRSF1B-204ENST00000536782 GJD3Q8N144 294 aa22.37■■□□□ 1.17
TNFRSF1B-204ENST00000536782 CRIPAKQ8N1N5 446 aa22.37■■□□□ 1.17
TNFRSF1B-204ENST00000536782 CRYGNQ8WXF5 182 aa22.37■■□□□ 1.17
TNFRSF1B-204ENST00000536782 KCNB2Q92953 911 aa22.37■■□□□ 1.17
TNFRSF1B-204ENST00000536782 BRF1Q92994 677 aa22.37■■□□□ 1.17
TNFRSF1B-204ENST00000536782 JAKMIP1Q96N16 626 aaKnown RBP22.37■■□□□ 1.17
TNFRSF1B-204ENST00000536782 PLVAPQ9BX97 442 aa22.37■■□□□ 1.17
TNFRSF1B-204ENST00000536782 ZMYND12Q9H0C1 365 aa22.37■■□□□ 1.17
TNFRSF1B-204ENST00000536782 C6orf50Q9HD87 102 aa22.37■■□□□ 1.17
TNFRSF1B-204ENST00000536782 ZNF302Q9NR11 478 aa22.37■■□□□ 1.17
TNFRSF1B-204ENST00000536782 IGLV3-22A0A075B6J6 115 aa22.36■■□□□ 1.17
TNFRSF1B-204ENST00000536782 DHX15O43143 795 aaKnown RBP22.36■■□□□ 1.17
TNFRSF1B-204ENST00000536782 PLA2G5P39877 138 aa22.36■■□□□ 1.17
TNFRSF1B-204ENST00000536782 CCDC60Q8IWA6 550 aaPredicted RBP22.36■■□□□ 1.17
TNFRSF1B-204ENST00000536782 CMTR2Q8IYT2 770 aaKnown RBP22.36■■□□□ 1.17
TNFRSF1B-204ENST00000536782 CLDND1Q9NY35 253 aa22.36■■□□□ 1.17
TNFRSF1B-204ENST00000536782 COL1A2P08123 1366 aa22.36■■□□□ 1.17
TNFRSF1B-204ENST00000536782 PI4K2BG5E9Z4 385 aa22.35■■□□□ 1.17
TNFRSF1B-204ENST00000536782 PRPF3O43395 683 aaKnown RBP22.35■■□□□ 1.17
TNFRSF1B-204ENST00000536782 SSTR3P32745 418 aaPredicted RBP22.35■■□□□ 1.17
TNFRSF1B-204ENST00000536782 HSPA4P34932 840 aa22.35■■□□□ 1.17
TNFRSF1B-204ENST00000536782 SETQ01105 290 aaPredicted RBP22.35■■□□□ 1.17
TNFRSF1B-204ENST00000536782 ZNF484Q5JVG2 852 aa22.35■■□□□ 1.17
TNFRSF1B-204ENST00000536782 SWSAP1Q6NVH7 229 aa22.35■■□□□ 1.17
TNFRSF1B-204ENST00000536782 PDXDC2PQ6P474 469 aa22.35■■□□□ 1.17
TNFRSF1B-204ENST00000536782 BLOC1S2Q6QNY1 142 aa22.35■■□□□ 1.17
TNFRSF1B-204ENST00000536782 FAM43BQ6ZT52 329 aaPredicted RBP22.35■■□□□ 1.17
TNFRSF1B-204ENST00000536782 REXO1Q8N1G1 1221 aaKnown RBP22.35■■□□□ 1.17
TNFRSF1B-204ENST00000536782 ZNF577Q9BSK1 485 aa22.35■■□□□ 1.17
TNFRSF1B-204ENST00000536782 TBC1D22BQ9NU19 505 aa22.35■■□□□ 1.17
TNFRSF1B-204ENST00000536782 FAM50BQ9Y247 325 aa22.35■■□□□ 1.17
TNFRSF1B-204ENST00000536782 SNX14Q9Y5W7 946 aa22.35■■□□□ 1.17
TNFRSF1B-204ENST00000536782 MRPL42Q9Y6G3 142 aaKnown RBP22.35■■□□□ 1.17
TNFRSF1B-204ENST00000536782 EVPLQ92817 2033 aa22.35■■□□□ 1.17
TNFRSF1B-204ENST00000536782 GNA11P29992 359 aa22.34■■□□□ 1.17
TNFRSF1B-204ENST00000536782 NFX1Q12986 1120 aaKnown RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms