RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 OAS2P29728 719 aaKnown RBP14.72□□□□□ -0.05
VPS33B-202ENST00000535906 KIF5AQ12840 1032 aa14.72□□□□□ -0.05
VPS33B-202ENST00000535906 BMT2Q1RMZ1 405 aa14.72□□□□□ -0.05
VPS33B-202ENST00000535906 HGSNATQ68CP4 663 aa14.72□□□□□ -0.05
VPS33B-202ENST00000535906 B3GNT9Q6UX72 402 aa14.72□□□□□ -0.05
VPS33B-202ENST00000535906 SAMD7Q7Z3H4 446 aa14.72□□□□□ -0.05
VPS33B-202ENST00000535906 CPXCR1Q8N123 301 aa14.72□□□□□ -0.05
VPS33B-202ENST00000535906 CLEC4DQ8WXI8 215 aa14.72□□□□□ -0.05
VPS33B-202ENST00000535906 HOOK2Q96ED9 719 aa14.72□□□□□ -0.05
VPS33B-202ENST00000535906 IFIH1Q9BYX4 1025 aaKnown RBP14.72□□□□□ -0.05
VPS33B-202ENST00000535906 DEF6Q9H4E7 631 aa14.72□□□□□ -0.05
VPS33B-202ENST00000535906 CEP72Q9P209 647 aa14.72□□□□□ -0.05
VPS33B-202ENST00000535906 FAM184BQ9ULE4 1060 aa14.72□□□□□ -0.05
VPS33B-202ENST00000535906 PCDHA13Q9Y5I0 950 aa14.72□□□□□ -0.05
VPS33B-202ENST00000535906 ASTN1O14525 1302 aa14.72□□□□□ -0.05
VPS33B-202ENST00000535906 WDR46O15213 610 aaKnown RBP14.72□□□□□ -0.05
VPS33B-202ENST00000535906 TLR2O60603 784 aa14.72□□□□□ -0.05
VPS33B-202ENST00000535906 POLR2FP61218 127 aaKnown RBP14.72□□□□□ -0.05
VPS33B-202ENST00000535906 SETQ01105 290 aaPredicted RBP14.72□□□□□ -0.05
VPS33B-202ENST00000535906 ASTE1Q2TB18 679 aaPredicted RBP14.72□□□□□ -0.05
VPS33B-202ENST00000535906 MXRA8Q9BRK3 442 aa14.72□□□□□ -0.05
VPS33B-202ENST00000535906 OLFML3Q9NRN5 406 aa14.72□□□□□ -0.05
VPS33B-202ENST00000535906 PPP1R1BQ9UD71 204 aaPredicted RBP14.72□□□□□ -0.05
VPS33B-202ENST00000535906 AKR1B10O60218 316 aa14.71□□□□□ -0.05
VPS33B-202ENST00000535906 AKAP3O75969 853 aa14.71□□□□□ -0.05
VPS33B-202ENST00000535906 TNFAIP1Q13829 316 aa14.71□□□□□ -0.05
VPS33B-202ENST00000535906 PAPD7Q5XG87 772 aaKnown RBP14.71□□□□□ -0.05
VPS33B-202ENST00000535906 IL31RAQ8NI17 732 aa14.71□□□□□ -0.05
VPS33B-202ENST00000535906 LPAR1Q92633 364 aa14.71□□□□□ -0.05
VPS33B-202ENST00000535906 WDR11Q9BZH6 1224 aa14.71□□□□□ -0.05
VPS33B-202ENST00000535906 KIAA1683Q9H0B3 1180 aa14.71□□□□□ -0.05
VPS33B-202ENST00000535906 IKZF4Q9H2S9 585 aa14.71□□□□□ -0.05
VPS33B-202ENST00000535906 TYW1Q9NV66 732 aaKnown RBP14.71□□□□□ -0.05
VPS33B-202ENST00000535906 POLR3GO15318 223 aaPredicted RBP14.71□□□□□ -0.06
VPS33B-202ENST00000535906 CALUO43852 315 aaPredicted RBP14.71□□□□□ -0.06
VPS33B-202ENST00000535906 SRGAP2O75044 1071 aa14.71□□□□□ -0.06
VPS33B-202ENST00000535906 RHOXF2BP0C7M4 288 aa14.71□□□□□ -0.06
VPS33B-202ENST00000535906 NMT1P30419 496 aaKnown RBP14.71□□□□□ -0.06
VPS33B-202ENST00000535906 ARHGAP27Q6ZUM4 889 aa14.71□□□□□ -0.06
VPS33B-202ENST00000535906 FRMD5Q7Z6J6 570 aa14.71□□□□□ -0.06
VPS33B-202ENST00000535906 MYCT1Q8N699 235 aa14.71□□□□□ -0.06
VPS33B-202ENST00000535906 NOA1Q8NC60 698 aaKnown RBP14.71□□□□□ -0.06
VPS33B-202ENST00000535906 RHOXF2Q9BQY4 288 aa14.71□□□□□ -0.06
VPS33B-202ENST00000535906 TEKT3Q9BXF9 490 aa14.71□□□□□ -0.06
VPS33B-202ENST00000535906 RAVER2Q9HCJ3 691 aaKnown RBP14.71□□□□□ -0.06
VPS33B-202ENST00000535906 ARMCX3Q9UH62 379 aaPredicted RBP14.71□□□□□ -0.06
VPS33B-202ENST00000535906 SAR1BQ9Y6B6 198 aa14.71□□□□□ -0.06
VPS33B-202ENST00000535906 BRCA1P38398 1863 aaKnown RBP14.71□□□□□ -0.06
VPS33B-202ENST00000535906 RPTORQ8N122 1335 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 DDX39AO00148 427 aaKnown RBP14.7□□□□□ -0.06
VPS33B-202ENST00000535906 CLIC2O15247 247 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 TGFB1I1O43294 461 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 FAM13AO94988 1023 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 NR3C1P04150 777 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 ALAS1P13196 640 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 GAP43P17677 238 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 CYP2C19P33261 490 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 EPS15P42566 896 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 CASP4P49662 377 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 GFPT1Q06210 699 aaPredicted RBP14.7□□□□□ -0.06
VPS33B-202ENST00000535906 EPHA7Q15375 998 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 ZC2HC1CQ53FD0 456 aaPredicted RBP14.7□□□□□ -0.06
VPS33B-202ENST00000535906 MUM1L1Q5H9M0 696 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 HDXQ7Z353 690 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 MICALL2Q8IY33 904 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 MSL3Q8N5Y2 521 aaKnown RBP14.7□□□□□ -0.06
VPS33B-202ENST00000535906 BANK1Q8NDB2 785 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 SECISBP2LQ93073 1101 aaKnown RBP14.7□□□□□ -0.06
VPS33B-202ENST00000535906 NACC1Q96RE7 527 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 GBP3Q9H0R5 595 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 KCNH7Q9NS40 1196 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 HOMER2Q9NSB8 354 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 PKD2L1Q9P0L9 805 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 CTNND1O60716 968 aaKnown RBP14.7□□□□□ -0.06
VPS33B-202ENST00000535906 VSNL1P62760 191 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 MAPK8IP2Q13387 824 aaPredicted RBP14.7□□□□□ -0.06
VPS33B-202ENST00000535906 TBC1D10BQ4KMP7 808 aaPredicted RBP14.7□□□□□ -0.06
VPS33B-202ENST00000535906 SFMBT2Q5VUG0 894 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 FIZ1Q96SL8 496 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 LXNQ9BS40 222 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 TSGA10Q9BZW7 698 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 PARVGQ9HBI0 331 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 SLC38A10Q9HBR0 1119 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 ABCB6Q9NP58 842 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 HACL1Q9UJ83 578 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 L1RE1Q9UN81 338 aa14.7□□□□□ -0.06
VPS33B-202ENST00000535906 SSU72P8A0A1W2PR75 194 aa14.69□□□□□ -0.06
VPS33B-202ENST00000535906 USO1O60763 962 aaKnown RBP14.69□□□□□ -0.06
VPS33B-202ENST00000535906 MUTP22033 750 aa14.69□□□□□ -0.06
VPS33B-202ENST00000535906 RPS12P25398 132 aaKnown RBP14.69□□□□□ -0.06
VPS33B-202ENST00000535906 GMPSP49915 693 aaPredicted RBP14.69□□□□□ -0.06
VPS33B-202ENST00000535906 MTMR2Q13614 643 aa14.69□□□□□ -0.06
VPS33B-202ENST00000535906 TDRD12Q587J7 1177 aaKnown RBP14.69□□□□□ -0.06
VPS33B-202ENST00000535906 WDR93Q6P2C0 686 aa14.69□□□□□ -0.06
VPS33B-202ENST00000535906 KSR1Q8IVT5 923 aa14.69□□□□□ -0.06
VPS33B-202ENST00000535906 SYN2Q92777 582 aaPredicted RBP14.69□□□□□ -0.06
VPS33B-202ENST00000535906 RIT2Q99578 217 aa14.69□□□□□ -0.06
VPS33B-202ENST00000535906 NUCKS1Q9H1E3 243 aaKnown RBP14.69□□□□□ -0.06
VPS33B-202ENST00000535906 GANQ9H2C0 597 aa14.69□□□□□ -0.06
VPS33B-202ENST00000535906 MLXIPQ9HAP2 919 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms