RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 RUFY4Q6ZNE9 571 aa13.44□□□□□ -0.26
KNTC1-208ENST00000535410 TSHZ1Q6ZSZ6 1077 aa13.44□□□□□ -0.26
KNTC1-208ENST00000535410 KRT25Q7Z3Z0 450 aa13.44□□□□□ -0.26
KNTC1-208ENST00000535410 ATXN2LQ8WWM7 1075 aaKnown RBP13.44□□□□□ -0.26
KNTC1-208ENST00000535410 PPM1EQ8WY54 764 aa13.44□□□□□ -0.26
KNTC1-208ENST00000535410 TOP1MTQ969P6 601 aa13.44□□□□□ -0.26
KNTC1-208ENST00000535410 SAMD11Q96NU1 681 aa13.44□□□□□ -0.26
KNTC1-208ENST00000535410 YME1L1Q96TA2 773 aa13.44□□□□□ -0.26
KNTC1-208ENST00000535410 FAM49AQ9H0Q0 323 aaPredicted RBP13.44□□□□□ -0.26
KNTC1-208ENST00000535410 NRBP2Q9NSY0 501 aa13.44□□□□□ -0.26
KNTC1-208ENST00000535410 LMCD1Q9NZU5 365 aa13.44□□□□□ -0.26
KNTC1-208ENST00000535410 TANC1Q9C0D5 1861 aa13.44□□□□□ -0.26
KNTC1-208ENST00000535410 STK36Q9NRP7 1315 aa13.43□□□□□ -0.26
KNTC1-208ENST00000535410 COL6A3P12111 3177 aa13.43□□□□□ -0.26
KNTC1-208ENST00000535410 CCDC194A0A1B0GVG4 234 aa13.43□□□□□ -0.26
KNTC1-208ENST00000535410 MAGEB2O15479 319 aa13.43□□□□□ -0.26
KNTC1-208ENST00000535410 PPFIA3O75145 1194 aa13.43□□□□□ -0.26
KNTC1-208ENST00000535410 GHRP10912 638 aa13.43□□□□□ -0.26
KNTC1-208ENST00000535410 KLRC1P26715 233 aa13.43□□□□□ -0.26
KNTC1-208ENST00000535410 TMOD1P28289 359 aa13.43□□□□□ -0.26
KNTC1-208ENST00000535410 JAK3P52333 1124 aa13.43□□□□□ -0.26
KNTC1-208ENST00000535410 ERVK-21P61565 698 aa13.43□□□□□ -0.26
KNTC1-208ENST00000535410 ADGRE1Q14246 886 aa13.43□□□□□ -0.26
KNTC1-208ENST00000535410 SCN5AQ14524 2016 aa13.43□□□□□ -0.26
KNTC1-208ENST00000535410 AAK1Q2M2I8 961 aa13.43□□□□□ -0.26
KNTC1-208ENST00000535410 MTHFD1LQ6UB35 978 aa13.43□□□□□ -0.26
KNTC1-208ENST00000535410 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.43□□□□□ -0.26
KNTC1-208ENST00000535410 IL27Q8NEV9 243 aa13.43□□□□□ -0.26
KNTC1-208ENST00000535410 RDM1Q8NG50 284 aa13.43□□□□□ -0.26
KNTC1-208ENST00000535410 RASGRP4Q8TDF6 673 aa13.43□□□□□ -0.26
KNTC1-208ENST00000535410 TBCKQ8TEA7 893 aa13.43□□□□□ -0.26
KNTC1-208ENST00000535410 LARP6Q9BRS8 491 aaKnown RBP13.43□□□□□ -0.26
KNTC1-208ENST00000535410 TEKT3Q9BXF9 490 aa13.43□□□□□ -0.26
KNTC1-208ENST00000535410 BRMS1Q9HCU9 246 aa13.43□□□□□ -0.26
KNTC1-208ENST00000535410 FOXD4L1Q9NU39 408 aa13.43□□□□□ -0.26
KNTC1-208ENST00000535410 MAFBQ9Y5Q3 323 aaPredicted RBP13.43□□□□□ -0.26
KNTC1-208ENST00000535410 TRPV2Q9Y5S1 764 aa13.43□□□□□ -0.26
KNTC1-208ENST00000535410 CDY2AQ9Y6F7 541 aa13.43□□□□□ -0.26
KNTC1-208ENST00000535410 KAT6AQ92794 2004 aa13.42□□□□□ -0.26
KNTC1-208ENST00000535410 CUL9Q8IWT3 2517 aa13.42□□□□□ -0.26
KNTC1-208ENST00000535410 CYP3A7-CYP3A51PA0A087WV96 503 aa13.42□□□□□ -0.26
KNTC1-208ENST00000535410 CYP3A7P24462 503 aa13.42□□□□□ -0.26
KNTC1-208ENST00000535410 MGAT3Q09327 533 aa13.42□□□□□ -0.26
KNTC1-208ENST00000535410 SCRN1Q12765 414 aa13.42□□□□□ -0.26
KNTC1-208ENST00000535410 Q4G0T1 1027 aa13.42□□□□□ -0.26
KNTC1-208ENST00000535410 FBXO47Q5MNV8 452 aa13.42□□□□□ -0.26
KNTC1-208ENST00000535410 LRCH2Q5VUJ6 765 aa13.42□□□□□ -0.26
KNTC1-208ENST00000535410 FAM117BQ6P1L5 589 aa13.42□□□□□ -0.26
KNTC1-208ENST00000535410 CCDC60Q8IWA6 550 aaPredicted RBP13.42□□□□□ -0.26
KNTC1-208ENST00000535410 IL17RAQ96F46 866 aa13.42□□□□□ -0.26
KNTC1-208ENST00000535410 CELF4Q9BZC1 486 aaKnown RBP13.42□□□□□ -0.26
KNTC1-208ENST00000535410 CERS4Q9HA82 394 aa13.42□□□□□ -0.26
KNTC1-208ENST00000535410 DISC1Q9NRI5 854 aa13.42□□□□□ -0.26
KNTC1-208ENST00000535410 THEGQ9P2T0 379 aa13.42□□□□□ -0.26
KNTC1-208ENST00000535410 GABBR1Q9UBS5 961 aa13.42□□□□□ -0.26
KNTC1-208ENST00000535410 TET1Q8NFU7 2136 aa13.42□□□□□ -0.26
KNTC1-208ENST00000535410 KDM3AQ9Y4C1 1321 aa13.41□□□□□ -0.26
KNTC1-208ENST00000535410 MSH4O15457 936 aa13.41□□□□□ -0.26
KNTC1-208ENST00000535410 UPP2O95045 317 aa13.41□□□□□ -0.26
KNTC1-208ENST00000535410 GCFC2P16383 781 aaKnown RBP13.41□□□□□ -0.26
KNTC1-208ENST00000535410 NEK4P51957 841 aa13.41□□□□□ -0.26
KNTC1-208ENST00000535410 MRPS5P82675 430 aaKnown RBP13.41□□□□□ -0.26
KNTC1-208ENST00000535410 HTRA4P83105 476 aaPredicted RBP13.41□□□□□ -0.26
KNTC1-208ENST00000535410 CDC42EP1Q00587 391 aa13.41□□□□□ -0.26
KNTC1-208ENST00000535410 MKRN4PQ13434 485 aaPredicted RBP13.41□□□□□ -0.26
KNTC1-208ENST00000535410 LPIN1Q14693 890 aa13.41□□□□□ -0.26
KNTC1-208ENST00000535410 SKIV2LQ15477 1246 aaKnown RBP13.41□□□□□ -0.26
KNTC1-208ENST00000535410 CCDC85BQ15834 202 aaPredicted RBP13.41□□□□□ -0.26
KNTC1-208ENST00000535410 PTPROQ16827 1216 aa13.41□□□□□ -0.26
KNTC1-208ENST00000535410 TCTN1Q2MV58 587 aa13.41□□□□□ -0.26
KNTC1-208ENST00000535410 TJAP1Q5JTD0 557 aa13.41□□□□□ -0.26
KNTC1-208ENST00000535410 MICALL1Q8N3F8 863 aa13.41□□□□□ -0.26
KNTC1-208ENST00000535410 PHF20Q9BVI0 1012 aa13.41□□□□□ -0.26
KNTC1-208ENST00000535410 ORC3Q9UBD5 711 aaPredicted RBP13.41□□□□□ -0.26
KNTC1-208ENST00000535410 TPCN1Q9ULQ1 816 aa13.41□□□□□ -0.26
KNTC1-208ENST00000535410 RWDD3Q9Y3V2 267 aa13.41□□□□□ -0.26
KNTC1-208ENST00000535410 MTCH2Q9Y6C9 303 aa13.41□□□□□ -0.26
KNTC1-208ENST00000535410 A0A0C4DFX4 3053 aa13.4□□□□□ -0.26
KNTC1-208ENST00000535410 LINC01553A4QN01 128 aa13.4□□□□□ -0.26
KNTC1-208ENST00000535410 ENPP3O14638 875 aa13.4□□□□□ -0.26
KNTC1-208ENST00000535410 GPR182O15218 404 aa13.4□□□□□ -0.26
KNTC1-208ENST00000535410 MARCH6O60337 910 aa13.4□□□□□ -0.26
KNTC1-208ENST00000535410 DKC1O60832 514 aaKnown RBP eCLIP13.4□□□□□ -0.26
KNTC1-208ENST00000535410 STAG3L1P0CL83 205 aa13.4□□□□□ -0.26
KNTC1-208ENST00000535410 AK2P54819 239 aa13.4□□□□□ -0.26
KNTC1-208ENST00000535410 PAK2Q13177 524 aa13.4□□□□□ -0.26
KNTC1-208ENST00000535410 TRIM29Q14134 588 aa13.4□□□□□ -0.26
KNTC1-208ENST00000535410 TMCO2Q7Z6W1 182 aaPredicted RBP13.4□□□□□ -0.26
KNTC1-208ENST00000535410 FBXO22Q8NEZ5 403 aa13.4□□□□□ -0.26
KNTC1-208ENST00000535410 SP7Q8TDD2 431 aaPredicted RBP13.4□□□□□ -0.26
KNTC1-208ENST00000535410 SLC5A5Q92911 643 aa13.4□□□□□ -0.26
KNTC1-208ENST00000535410 LENG9Q96B70 501 aa13.4□□□□□ -0.26
KNTC1-208ENST00000535410 FAM20AQ96MK3 541 aa13.4□□□□□ -0.26
KNTC1-208ENST00000535410 DDX25Q9UHL0 483 aaKnown RBP13.4□□□□□ -0.26
KNTC1-208ENST00000535410 COG5Q9UP83 839 aa13.4□□□□□ -0.26
KNTC1-208ENST00000535410 IGSF9BQ9UPX0 1349 aa13.39□□□□□ -0.27
KNTC1-208ENST00000535410 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.39□□□□□ -0.27
KNTC1-208ENST00000535410 LCHNA4D1U4 455 aa13.39□□□□□ -0.27
KNTC1-208ENST00000535410 M0R2N6 131 aa13.39□□□□□ -0.27
KNTC1-208ENST00000535410 BAG4O95429 457 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms