RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 NUDT10Q8NFP7 164 aa7.44□□□□□ -1.22
PRKDC-205ENST00000535375 NUDT11Q96G61 164 aa7.44□□□□□ -1.22
PRKDC-205ENST00000535375 KCND1Q9NSA2 647 aa7.44□□□□□ -1.22
PRKDC-205ENST00000535375 GALNT8Q9NY28 637 aa7.44□□□□□ -1.22
PRKDC-205ENST00000535375 B3GALT1Q9Y5Z6 326 aa7.44□□□□□ -1.22
PRKDC-205ENST00000535375 DUSP10Q9Y6W6 482 aa7.44□□□□□ -1.22
PRKDC-205ENST00000535375 PRICKLE3O43900 615 aaPredicted RBP7.43□□□□□ -1.22
PRKDC-205ENST00000535375 IL18BPO95998 194 aa7.43□□□□□ -1.22
PRKDC-205ENST00000535375 WDR72Q3MJ13 1102 aa7.43□□□□□ -1.22
PRKDC-205ENST00000535375 CDCA2Q69YH5 1023 aaPredicted RBP7.43□□□□□ -1.22
PRKDC-205ENST00000535375 OTOP1Q7RTM1 612 aa7.43□□□□□ -1.22
PRKDC-205ENST00000535375 CXorf38Q8TB03 319 aa7.43□□□□□ -1.22
PRKDC-205ENST00000535375 DLG3Q92796 817 aa7.43□□□□□ -1.22
PRKDC-205ENST00000535375 NINJ1Q92982 152 aa7.43□□□□□ -1.22
PRKDC-205ENST00000535375 GBP4Q96PP9 640 aa7.43□□□□□ -1.22
PRKDC-205ENST00000535375 UCKL1Q9NWZ5 548 aa7.43□□□□□ -1.22
PRKDC-205ENST00000535375 INVSQ9Y283 1065 aa7.43□□□□□ -1.22
PRKDC-205ENST00000535375 NCANO14594 1321 aa7.43□□□□□ -1.22
PRKDC-205ENST00000535375 PTPDC1A2A3K4 754 aa7.42□□□□□ -1.22
PRKDC-205ENST00000535375 ZBTB48P10074 688 aaPredicted RBP7.42□□□□□ -1.22
PRKDC-205ENST00000535375 COL6A1P12109 1028 aa7.42□□□□□ -1.22
PRKDC-205ENST00000535375 MECP2P51608 486 aaKnown RBP7.42□□□□□ -1.22
PRKDC-205ENST00000535375 SURF1Q15526 300 aa7.42□□□□□ -1.22
PRKDC-205ENST00000535375 TKFCQ3LXA3 575 aa7.42□□□□□ -1.22
PRKDC-205ENST00000535375 TAF7LQ5H9L4 462 aa7.42□□□□□ -1.22
PRKDC-205ENST00000535375 FSTL4Q6MZW2 842 aa7.42□□□□□ -1.22
PRKDC-205ENST00000535375 CNNM4Q6P4Q7 775 aa7.42□□□□□ -1.22
PRKDC-205ENST00000535375 Q6ZUG5 572 aa7.42□□□□□ -1.22
PRKDC-205ENST00000535375 KBTBD2Q8IY47 623 aa7.42□□□□□ -1.22
PRKDC-205ENST00000535375 NIM1KQ8IY84 436 aa7.42□□□□□ -1.22
PRKDC-205ENST00000535375 ASB15Q8WXK1 588 aa7.42□□□□□ -1.22
PRKDC-205ENST00000535375 ERCC4Q92889 916 aaPredicted RBP7.42□□□□□ -1.22
PRKDC-205ENST00000535375 FEZ1Q99689 392 aa7.42□□□□□ -1.22
PRKDC-205ENST00000535375 BDH2Q9BUT1 245 aa7.42□□□□□ -1.22
PRKDC-205ENST00000535375 PCIF1Q9H4Z3 704 aa7.42□□□□□ -1.22
PRKDC-205ENST00000535375 BTBD7Q9P203 1132 aa7.42□□□□□ -1.22
PRKDC-205ENST00000535375 ZKSCAN5Q9Y2L8 839 aa7.42□□□□□ -1.22
PRKDC-205ENST00000535375 ZNF536O15090 1300 aa7.42□□□□□ -1.22
PRKDC-205ENST00000535375 PRAMEF22A3QJZ6 481 aa7.41□□□□□ -1.22
PRKDC-205ENST00000535375 H7C1D1 291 aa7.41□□□□□ -1.22
PRKDC-205ENST00000535375 KLHL18O94889 574 aa7.41□□□□□ -1.22
PRKDC-205ENST00000535375 SDHAP31040 664 aa7.41□□□□□ -1.22
PRKDC-205ENST00000535375 MC4RP32245 332 aa7.41□□□□□ -1.22
PRKDC-205ENST00000535375 ECE1P42892 770 aa7.41□□□□□ -1.22
PRKDC-205ENST00000535375 KIF11P52732 1056 aa7.41□□□□□ -1.22
PRKDC-205ENST00000535375 PLP2Q04941 152 aa7.41□□□□□ -1.22
PRKDC-205ENST00000535375 ZNF174Q15697 407 aa7.41□□□□□ -1.22
PRKDC-205ENST00000535375 TM4SF20Q53R12 229 aa7.41□□□□□ -1.22
PRKDC-205ENST00000535375 CC2D1AQ6P1N0 951 aaPredicted RBP7.41□□□□□ -1.22
PRKDC-205ENST00000535375 CXXC5Q7LFL8 322 aaKnown RBP7.41□□□□□ -1.22
PRKDC-205ENST00000535375 DHX37Q8IY37 1157 aaKnown RBP7.41□□□□□ -1.22
PRKDC-205ENST00000535375 JADE2Q9NQC1 790 aa7.41□□□□□ -1.22
PRKDC-205ENST00000535375 ASB1Q9Y576 335 aa7.41□□□□□ -1.22
PRKDC-205ENST00000535375 CBX4O00257 560 aa7.4□□□□□ -1.22
PRKDC-205ENST00000535375 TRAF5O00463 557 aa7.4□□□□□ -1.22
PRKDC-205ENST00000535375 B4GALT4O60513 344 aa7.4□□□□□ -1.22
PRKDC-205ENST00000535375 CELA3BP08861 270 aa7.4□□□□□ -1.22
PRKDC-205ENST00000535375 LRRTM3Q86VH5 581 aa7.4□□□□□ -1.22
PRKDC-205ENST00000535375 CALML6Q8TD86 181 aa7.4□□□□□ -1.22
PRKDC-205ENST00000535375 BTBD2Q9BX70 525 aa7.4□□□□□ -1.22
PRKDC-205ENST00000535375 ACSS2Q9NR19 701 aa7.4□□□□□ -1.22
PRKDC-205ENST00000535375 IFT57Q9NWB7 429 aa7.4□□□□□ -1.22
PRKDC-205ENST00000535375 B4GALT6Q9UBX8 382 aa7.4□□□□□ -1.22
PRKDC-205ENST00000535375 ADAM29Q9UKF5 820 aa7.4□□□□□ -1.22
PRKDC-205ENST00000535375 PLAAQ9Y263 795 aa7.4□□□□□ -1.22
PRKDC-205ENST00000535375 TMA7Q9Y2S6 64 aaKnown RBP7.4□□□□□ -1.22
PRKDC-205ENST00000535375 KPNA6O60684 536 aa7.39□□□□□ -1.23
PRKDC-205ENST00000535375 GAS7O60861 476 aa7.39□□□□□ -1.23
PRKDC-205ENST00000535375 CUTAO60888 179 aa7.39□□□□□ -1.23
PRKDC-205ENST00000535375 POLD1P28340 1107 aa7.39□□□□□ -1.23
PRKDC-205ENST00000535375 CATSPEREQ5SY80 951 aa7.39□□□□□ -1.23
PRKDC-205ENST00000535375 ARHGEF18Q6ZSZ5 1173 aa7.39□□□□□ -1.23
PRKDC-205ENST00000535375 RALYLQ86SE5 291 aaKnown RBP7.39□□□□□ -1.23
PRKDC-205ENST00000535375 REXO1L1PQ8IX06 675 aa7.39□□□□□ -1.23
PRKDC-205ENST00000535375 IFNL2Q8IZJ0 200 aa7.39□□□□□ -1.23
PRKDC-205ENST00000535375 E2F7Q96AV8 911 aa7.39□□□□□ -1.23
PRKDC-205ENST00000535375 MBD6Q96DN6 1003 aa7.39□□□□□ -1.23
PRKDC-205ENST00000535375 FBXO10Q9UK96 956 aa7.39□□□□□ -1.23
PRKDC-205ENST00000535375 TLDC2A0PJX2 215 aa7.38□□□□□ -1.23
PRKDC-205ENST00000535375 RASSF10A6NK89 507 aa7.38□□□□□ -1.23
PRKDC-205ENST00000535375 GOLGA6L22H0YM25 854 aa7.38□□□□□ -1.23
PRKDC-205ENST00000535375 LAMTOR5O43504 91 aa7.38□□□□□ -1.23
PRKDC-205ENST00000535375 B4GALT3O60512 393 aa7.38□□□□□ -1.23
PRKDC-205ENST00000535375 PLATP00750 562 aa7.38□□□□□ -1.23
PRKDC-205ENST00000535375 CYP17A1P05093 508 aa7.38□□□□□ -1.23
PRKDC-205ENST00000535375 IL13RA1P78552 427 aa7.38□□□□□ -1.23
PRKDC-205ENST00000535375 LRSAM1Q6UWE0 723 aa7.38□□□□□ -1.23
PRKDC-205ENST00000535375 OTOP2Q7RTS6 562 aa7.38□□□□□ -1.23
PRKDC-205ENST00000535375 AHI1Q8N157 1196 aa7.38□□□□□ -1.23
PRKDC-205ENST00000535375 AJUBAQ96IF1 538 aa7.38□□□□□ -1.23
PRKDC-205ENST00000535375 AMNQ9BXJ7 453 aa7.38□□□□□ -1.23
PRKDC-205ENST00000535375 CARD11Q9BXL7 1154 aa7.38□□□□□ -1.23
PRKDC-205ENST00000535375 OR10A5Q9H207 317 aa7.38□□□□□ -1.23
PRKDC-205ENST00000535375 ENPP3O14638 875 aa7.37□□□□□ -1.23
PRKDC-205ENST00000535375 ADCY8P40145 1251 aa7.37□□□□□ -1.23
PRKDC-205ENST00000535375 FNTBP49356 437 aa7.37□□□□□ -1.23
PRKDC-205ENST00000535375 PPP2CBP62714 309 aa7.37□□□□□ -1.23
PRKDC-205ENST00000535375 PPP2CAP67775 309 aa7.37□□□□□ -1.23
PRKDC-205ENST00000535375 USP10Q14694 798 aaKnown RBP7.37□□□□□ -1.23
PRKDC-205ENST00000535375 SART3Q15020 963 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms