RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 UPF3BQ9BZI7 483 aaKnown RBP9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 FAM49AQ9H0Q0 323 aaPredicted RBP9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 TSPYL2Q9H2G4 693 aaPredicted RBP9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 INSL6Q9Y581 213 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 CDY2AQ9Y6F7 541 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 LOXHD1Q8IVV2 1947 aa9.7□□□□□ -0.86
SFSWAP-202ENST00000535202 IGLV3-22A0A075B6J6 115 aa9.69□□□□□ -0.86
SFSWAP-202ENST00000535202 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.69□□□□□ -0.86
SFSWAP-202ENST00000535202 POTEB3A0JP26 581 aa9.69□□□□□ -0.86
SFSWAP-202ENST00000535202 GOLGA6L3A6NEY3 463 aa9.69□□□□□ -0.86
SFSWAP-202ENST00000535202 IPO5O00410 1097 aaKnown RBP9.69□□□□□ -0.86
SFSWAP-202ENST00000535202 CPLX1O14810 134 aa9.69□□□□□ -0.86
SFSWAP-202ENST00000535202 MRE11P49959 708 aa9.69□□□□□ -0.86
SFSWAP-202ENST00000535202 NLRP5P59047 1200 aa9.69□□□□□ -0.86
SFSWAP-202ENST00000535202 ERVK-21P61565 698 aa9.69□□□□□ -0.86
SFSWAP-202ENST00000535202 MRPS6P82932 125 aaKnown RBP9.69□□□□□ -0.86
SFSWAP-202ENST00000535202 SSRP1Q08945 709 aaKnown RBP9.69□□□□□ -0.86
SFSWAP-202ENST00000535202 TMEM62Q0P6H9 643 aa9.69□□□□□ -0.86
SFSWAP-202ENST00000535202 BECN1Q14457 450 aa9.69□□□□□ -0.86
SFSWAP-202ENST00000535202 PRR16Q569H4 304 aa9.69□□□□□ -0.86
SFSWAP-202ENST00000535202 MIS18BP1Q6P0N0 1132 aa9.69□□□□□ -0.86
SFSWAP-202ENST00000535202 POTEBQ6S5H4 581 aa9.69□□□□□ -0.86
SFSWAP-202ENST00000535202 NLRC5Q86WI3 1866 aa9.69□□□□□ -0.86
SFSWAP-202ENST00000535202 ATXN2LQ8WWM7 1075 aaKnown RBP9.69□□□□□ -0.86
SFSWAP-202ENST00000535202 CRYGNQ8WXF5 182 aa9.69□□□□□ -0.86
SFSWAP-202ENST00000535202 YME1L1Q96TA2 773 aa9.69□□□□□ -0.86
SFSWAP-202ENST00000535202 TM6SF1Q9BZW5 370 aa9.69□□□□□ -0.86
SFSWAP-202ENST00000535202 ZNF302Q9NR11 478 aa9.69□□□□□ -0.86
SFSWAP-202ENST00000535202 PDRG1Q9NUG6 133 aa9.69□□□□□ -0.86
SFSWAP-202ENST00000535202 TCEAL9Q9UHQ7 104 aa9.69□□□□□ -0.86
SFSWAP-202ENST00000535202 UNC80Q8N2C7 3258 aa9.69□□□□□ -0.86
SFSWAP-202ENST00000535202 MYH9P35579 1960 aaKnown RBP9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 M0QZ92 97 aa9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 DHX15O43143 795 aaKnown RBP9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 LPXNO60711 386 aa9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 ATG7O95352 703 aa9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 RPLP2P05387 115 aaKnown RBP9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 POU3F3P20264 500 aaPredicted RBP9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 MRPS5P82675 430 aaKnown RBP9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 HTRA4P83105 476 aaPredicted RBP9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 LPIN1Q14693 890 aa9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 FBXO47Q5MNV8 452 aa9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 IER5Q5VY09 327 aa9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 PDXDC2PQ6P474 469 aa9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 ABHD15Q6UXT9 468 aa9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 TSHZ1Q6ZSZ6 1077 aa9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 CCDC60Q8IWA6 550 aaPredicted RBP9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 CKAP2LQ8IYA6 745 aa9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 TOP1MTQ969P6 601 aa9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 ZNF274Q96GC6 653 aaPredicted RBP9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 ASB2Q96Q27 587 aa9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 C17orf80Q9BSJ5 609 aa9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 SUGCTQ9HAC7 445 aa9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 SH3GLB2Q9NR46 395 aa9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 TBC1D22BQ9NU19 505 aa9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 PCDHA2Q9Y5H9 948 aa9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 TRPV2Q9Y5S1 764 aa9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 PRRC2BQ5JSZ5 2229 aaKnown RBP9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 WDR81Q562E7 1941 aa9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 CHD9Q3L8U1 2897 aa9.68□□□□□ -0.86
SFSWAP-202ENST00000535202 IGKV6D-21A0A0A0MT36 114 aa9.67□□□□□ -0.86
SFSWAP-202ENST00000535202 HBP1O60381 514 aa9.67□□□□□ -0.86
SFSWAP-202ENST00000535202 DEXIO95424 95 aa9.67□□□□□ -0.86
SFSWAP-202ENST00000535202 CIITAP33076 1130 aa9.67□□□□□ -0.86
SFSWAP-202ENST00000535202 SLC26A2P50443 739 aa9.67□□□□□ -0.86
SFSWAP-202ENST00000535202 KRT76Q01546 638 aa9.67□□□□□ -0.86
SFSWAP-202ENST00000535202 PDE4CQ08493 712 aa9.67□□□□□ -0.86
SFSWAP-202ENST00000535202 ZNF746Q6NUN9 644 aaPredicted RBP9.67□□□□□ -0.86
SFSWAP-202ENST00000535202 SWSAP1Q6NVH7 229 aa9.67□□□□□ -0.86
SFSWAP-202ENST00000535202 CPLX2Q6PUV4 134 aaKnown RBP9.67□□□□□ -0.86
SFSWAP-202ENST00000535202 MTHFD1LQ6UB35 978 aa9.67□□□□□ -0.86
SFSWAP-202ENST00000535202 TRMT1LQ7Z2T5 733 aaKnown RBP9.67□□□□□ -0.86
SFSWAP-202ENST00000535202 FBXO22Q8NEZ5 403 aa9.67□□□□□ -0.86
SFSWAP-202ENST00000535202 SP7Q8TDD2 431 aaPredicted RBP9.67□□□□□ -0.86
SFSWAP-202ENST00000535202 ATP8B4Q8TF62 1192 aa9.67□□□□□ -0.86
SFSWAP-202ENST00000535202 PCDHA4Q9UN74 947 aa9.67□□□□□ -0.86
SFSWAP-202ENST00000535202 SAMM50Q9Y512 469 aa9.67□□□□□ -0.86
SFSWAP-202ENST00000535202 RALGAPA2Q2PPJ7 1873 aa9.67□□□□□ -0.86
SFSWAP-202ENST00000535202 PRUNE2Q8WUY3 3088 aa9.67□□□□□ -0.86
SFSWAP-202ENST00000535202 EVPLQ92817 2033 aa9.66□□□□□ -0.86
SFSWAP-202ENST00000535202 CHD7Q9P2D1 2997 aa9.66□□□□□ -0.86
SFSWAP-202ENST00000535202 COL1A2P08123 1366 aa9.66□□□□□ -0.86
SFSWAP-202ENST00000535202 SMIM35A0A1B0GVV1 85 aa9.66□□□□□ -0.86
SFSWAP-202ENST00000535202 CHMP2AO43633 222 aa9.66□□□□□ -0.86
SFSWAP-202ENST00000535202 PSAPP07602 524 aa9.66□□□□□ -0.86
SFSWAP-202ENST00000535202 KLRC1P26715 233 aa9.66□□□□□ -0.86
SFSWAP-202ENST00000535202 CD52P31358 61 aa9.66□□□□□ -0.86
SFSWAP-202ENST00000535202 TFF2Q03403 129 aa9.66□□□□□ -0.86
SFSWAP-202ENST00000535202 PAK2Q13177 524 aa9.66□□□□□ -0.86
SFSWAP-202ENST00000535202 EPC2Q52LR7 807 aa9.66□□□□□ -0.86
SFSWAP-202ENST00000535202 ZNF484Q5JVG2 852 aa9.66□□□□□ -0.86
SFSWAP-202ENST00000535202 BLIDQ8IZY5 108 aa9.66□□□□□ -0.86
SFSWAP-202ENST00000535202 TBCKQ8TEA7 893 aa9.66□□□□□ -0.86
SFSWAP-202ENST00000535202 LENG9Q96B70 501 aa9.66□□□□□ -0.86
SFSWAP-202ENST00000535202 AIFM3Q96NN9 605 aa9.66□□□□□ -0.86
SFSWAP-202ENST00000535202 PPP1R16BQ96T49 567 aa9.66□□□□□ -0.86
SFSWAP-202ENST00000535202 CELF4Q9BZC1 486 aaKnown RBP9.66□□□□□ -0.86
SFSWAP-202ENST00000535202 C22orf23Q9BZE7 217 aa9.66□□□□□ -0.86
SFSWAP-202ENST00000535202 AGO3Q9H9G7 860 aaKnown RBP9.66□□□□□ -0.86
SFSWAP-202ENST00000535202 GABBR1Q9UBS5 961 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms