RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 MTCH2Q9Y6C9 303 aa11.78□□□□□ -0.52
CSDE1-217ENST00000534699 IGSF9BQ9UPX0 1349 aa11.77□□□□□ -0.52
CSDE1-217ENST00000534699 CSPP1Q1MSJ5 1256 aa11.77□□□□□ -0.52
CSDE1-217ENST00000534699 TIGD5Q53EQ6 642 aa11.77□□□□□ -0.52
CSDE1-217ENST00000534699 MTHFD1LQ6UB35 978 aa11.77□□□□□ -0.52
CSDE1-217ENST00000534699 NPAS4Q8IUM7 802 aa11.77□□□□□ -0.52
CSDE1-217ENST00000534699 BLIDQ8IZY5 108 aa11.77□□□□□ -0.52
CSDE1-217ENST00000534699 FAM20AQ96MK3 541 aa11.77□□□□□ -0.52
CSDE1-217ENST00000534699 TEKT3Q9BXF9 490 aa11.77□□□□□ -0.52
CSDE1-217ENST00000534699 IFIH1Q9BYX4 1025 aaKnown RBP11.77□□□□□ -0.52
CSDE1-217ENST00000534699 CELF4Q9BZC1 486 aaKnown RBP11.77□□□□□ -0.52
CSDE1-217ENST00000534699 NAP1L2Q9ULW6 460 aaPredicted RBP11.77□□□□□ -0.52
CSDE1-217ENST00000534699 M0R2N6 131 aa11.77□□□□□ -0.53
CSDE1-217ENST00000534699 CHRNA1P02708 482 aa11.77□□□□□ -0.53
CSDE1-217ENST00000534699 RABGGTBP53611 331 aa11.77□□□□□ -0.53
CSDE1-217ENST00000534699 ORC2Q13416 577 aaPredicted RBP11.77□□□□□ -0.53
CSDE1-217ENST00000534699 COL9A3Q14050 684 aaPredicted RBP11.77□□□□□ -0.53
CSDE1-217ENST00000534699 JAKMIP3Q5VZ66 844 aa11.77□□□□□ -0.53
CSDE1-217ENST00000534699 TCEANC2Q96MN5 208 aa11.77□□□□□ -0.53
CSDE1-217ENST00000534699 ELAC1Q9H777 363 aaKnown RBP11.77□□□□□ -0.53
CSDE1-217ENST00000534699 TRPC6Q9Y210 931 aa11.77□□□□□ -0.53
CSDE1-217ENST00000534699 PPP4R3AQ6IN85 833 aa11.76□□□□□ -0.53
CSDE1-217ENST00000534699 P2RX5Q93086 422 aa11.76□□□□□ -0.53
CSDE1-217ENST00000534699 SLKQ9H2G2 1235 aaPredicted RBP11.76□□□□□ -0.53
CSDE1-217ENST00000534699 TMEM260Q9NX78 707 aa11.76□□□□□ -0.53
CSDE1-217ENST00000534699 CDY2AQ9Y6F7 541 aa11.76□□□□□ -0.53
CSDE1-217ENST00000534699 hCG_1642624A0A1W2PR95 340 aa11.76□□□□□ -0.53
CSDE1-217ENST00000534699 LINC01553A4QN01 128 aa11.76□□□□□ -0.53
CSDE1-217ENST00000534699 FAM86B1E9PN63 330 aa11.76□□□□□ -0.53
CSDE1-217ENST00000534699 GPR182O15218 404 aa11.76□□□□□ -0.53
CSDE1-217ENST00000534699 FAM86B2P0C5J1 330 aa11.76□□□□□ -0.53
CSDE1-217ENST00000534699 TMOD1P28289 359 aa11.76□□□□□ -0.53
CSDE1-217ENST00000534699 CRYBB1P53674 252 aaPredicted RBP11.76□□□□□ -0.53
CSDE1-217ENST00000534699 ADGRE1Q14246 886 aa11.76□□□□□ -0.53
CSDE1-217ENST00000534699 LPIN1Q14693 890 aa11.76□□□□□ -0.53
CSDE1-217ENST00000534699 NONOQ15233 471 aaKnown RBP eCLIP11.76□□□□□ -0.532e-6■■□□□ 12.7
CSDE1-217ENST00000534699 PDXDC2PQ6P474 469 aa11.76□□□□□ -0.53
CSDE1-217ENST00000534699 RAB11FIP4Q86YS3 637 aa11.76□□□□□ -0.53
CSDE1-217ENST00000534699 ASB2Q96Q27 587 aa11.76□□□□□ -0.53
CSDE1-217ENST00000534699 BCAS3Q9H6U6 928 aa11.76□□□□□ -0.53
CSDE1-217ENST00000534699 TTC3P53804 2025 aa11.76□□□□□ -0.53
CSDE1-217ENST00000534699 HOXA2O43364 376 aa11.75□□□□□ -0.53
CSDE1-217ENST00000534699 DEFB103AP81534 67 aa11.75□□□□□ -0.53
CSDE1-217ENST00000534699 TRIM50Q86XT4 487 aa11.75□□□□□ -0.53
CSDE1-217ENST00000534699 FBXO22Q8NEZ5 403 aa11.75□□□□□ -0.53
CSDE1-217ENST00000534699 NIFKQ9BYG3 293 aaKnown RBP11.75□□□□□ -0.53
CSDE1-217ENST00000534699 BRMS1Q9HCU9 246 aa11.75□□□□□ -0.53
CSDE1-217ENST00000534699 H3BNC9 293 aa11.75□□□□□ -0.53
CSDE1-217ENST00000534699 BACH1O14867 736 aa11.75□□□□□ -0.53
CSDE1-217ENST00000534699 GAS2O43903 313 aaKnown RBP11.75□□□□□ -0.53
CSDE1-217ENST00000534699 CCNE2O96020 404 aa11.75□□□□□ -0.53
CSDE1-217ENST00000534699 B3GNT9Q6UX72 402 aa11.75□□□□□ -0.53
CSDE1-217ENST00000534699 CLP1Q92989 425 aaKnown RBP11.75□□□□□ -0.53
CSDE1-217ENST00000534699 LENG9Q96B70 501 aa11.75□□□□□ -0.53
CSDE1-217ENST00000534699 ZNF689Q96CS4 500 aaPredicted RBP11.75□□□□□ -0.53
CSDE1-217ENST00000534699 PHF20Q9BVI0 1012 aa11.75□□□□□ -0.53
CSDE1-217ENST00000534699 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.74□□□□□ -0.53
CSDE1-217ENST00000534699 ENPP3O14638 875 aa11.74□□□□□ -0.53
CSDE1-217ENST00000534699 GRB10Q13322 594 aa11.74□□□□□ -0.53
CSDE1-217ENST00000534699 PDE12Q6L8Q7 609 aaKnown RBP11.74□□□□□ -0.53
CSDE1-217ENST00000534699 RUFY4Q6ZNE9 571 aa11.74□□□□□ -0.53
CSDE1-217ENST00000534699 FIBCD1Q8N539 461 aa11.74□□□□□ -0.53
CSDE1-217ENST00000534699 DNAJB3Q8WWF6 145 aa11.74□□□□□ -0.53
CSDE1-217ENST00000534699 MRPL38Q96DV4 380 aaKnown RBP11.74□□□□□ -0.53
CSDE1-217ENST00000534699 RC3H2Q9HBD1 1191 aaKnown RBP11.74□□□□□ -0.53
CSDE1-217ENST00000534699 SARSP49591 514 aaKnown RBP11.74□□□□□ -0.53
CSDE1-217ENST00000534699 UBE3AQ05086 875 aa11.74□□□□□ -0.53
CSDE1-217ENST00000534699 COL19A1Q14993 1142 aa11.74□□□□□ -0.53
CSDE1-217ENST00000534699 PCBP1Q15365 356 aaKnown RBP eCLIP11.74□□□□□ -0.53
CSDE1-217ENST00000534699 LINC01465Q8N7H1 131 aa11.74□□□□□ -0.53
CSDE1-217ENST00000534699 NEK9Q8TD19 979 aa11.74□□□□□ -0.53
CSDE1-217ENST00000534699 ZFP91Q96JP5 570 aaPredicted RBP11.74□□□□□ -0.53
CSDE1-217ENST00000534699 C11orf84Q9BUA3 381 aaPredicted RBP11.74□□□□□ -0.53
CSDE1-217ENST00000534699 ERVK-5Q9HDB9 667 aa11.74□□□□□ -0.53
CSDE1-217ENST00000534699 FAM50BQ9Y247 325 aa11.74□□□□□ -0.53
CSDE1-217ENST00000534699 LOXHD1Q8IVV2 1947 aa11.74□□□□□ -0.53
CSDE1-217ENST00000534699 GAS7O60861 476 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 PSMD10O75832 226 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 SKIP12755 728 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 IGFBP4P22692 258 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 KLRC1P26715 233 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 PAK2Q13177 524 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 MAP7D2Q96T17 732 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 YME1L1Q96TA2 773 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 LLPHQ9BRT6 129 aaKnown RBP11.73□□□□□ -0.53
CSDE1-217ENST00000534699 INO80BQ9C086 356 aaPredicted RBP11.73□□□□□ -0.53
CSDE1-217ENST00000534699 DISC1Q9NRI5 854 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 ADGRA3Q8IWK6 1321 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 LPXNO60711 386 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 C22orf31O95567 290 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 OATP04181 439 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 SP4Q02446 784 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 PPP2R5CQ13362 524 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 TCTN1Q2MV58 587 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 PRR16Q569H4 304 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 XKR3Q5GH77 459 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.73□□□□□ -0.537e-9■■■□□ 18.5
CSDE1-217ENST00000534699 SLFN12Q8IYM2 578 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 CRIPAKQ8N1N5 446 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 CYP2W1Q8TAV3 490 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms