RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 POLR3CQ9BUI4 534 aaPredicted RBP10.71□□□□□ -0.69
CHKA-207ENST00000533728 CCDC94Q9BW85 323 aaPredicted RBP10.71□□□□□ -0.69
CHKA-207ENST00000533728 RANBP17Q9H2T7 1088 aaKnown RBP10.71□□□□□ -0.69
CHKA-207ENST00000533728 ZBTB21Q9ULJ3 1066 aa10.71□□□□□ -0.69
CHKA-207ENST00000533728 PRR12Q9ULL5 1215 aa10.71□□□□□ -0.69
CHKA-207ENST00000533728 NCOR2Q9Y618 2525 aa10.71□□□□□ -0.69
CHKA-207ENST00000533728 FLNBO75369 2602 aaKnown RBP10.71□□□□□ -0.7
CHKA-207ENST00000533728 MYH10P35580 1976 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 SOWAHDA6NJG2 315 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 FAM196BA6NMK8 535 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 USP17L15C9J2P7 530 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 USP17L13C9JLJ4 530 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 USP17L11C9JVI0 530 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 USP17L18D6R9N7 530 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 USP17L22D6RA61 530 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 USP17L17D6RBQ6 530 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 USP17L19D6RCP7 530 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 USP17L20D6RJB6 530 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 KIF5CO60282 957 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 GDF11O95390 407 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 FCER1AP12319 257 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 MTIF2P46199 727 aaKnown RBP10.7□□□□□ -0.7
CHKA-207ENST00000533728 GNG11P61952 73 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 GHRHRQ02643 423 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 SPIRE1Q08AE8 756 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 TBC1D8BQ0IIM8 1120 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 USP17L24Q0WX57 530 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 COASYQ13057 564 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 ZCWPW2Q504Y3 356 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 MIIPQ5JXC2 388 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 FAM26FQ5R3K3 315 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 USP17L6PQ6QN14 398 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 KIFC2Q96AC6 838 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 LENG9Q96B70 501 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 FBXL18Q96ME1 805 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 NUDT12Q9BQG2 462 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 VCPKMTQ9H867 229 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 ZNHIT6Q9NWK9 470 aaKnown RBP10.7□□□□□ -0.7
CHKA-207ENST00000533728 SRRDQ9UH36 339 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 FEM1BQ9UK73 627 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 MAPK8IP1Q9UQF2 711 aa10.7□□□□□ -0.7
CHKA-207ENST00000533728 MRPL11Q9Y3B7 192 aaKnown RBP10.7□□□□□ -0.7
CHKA-207ENST00000533728 EPN1Q9Y6I3 576 aaPredicted RBP10.7□□□□□ -0.7
CHKA-207ENST00000533728 FAM186AA6NE01 2351 aa10.69□□□□□ -0.7
CHKA-207ENST00000533728 A0A1W2PRG0 241 aa10.69□□□□□ -0.7
CHKA-207ENST00000533728 TTC26A0AVF1 554 aa10.69□□□□□ -0.7
CHKA-207ENST00000533728 TESPA1A2RU30 521 aaPredicted RBP10.69□□□□□ -0.7
CHKA-207ENST00000533728 UNCXA6NJT0 531 aa10.69□□□□□ -0.7
CHKA-207ENST00000533728 ASNSP08243 561 aa10.69□□□□□ -0.7
CHKA-207ENST00000533728 PLA2G4BP0C869 781 aa10.69□□□□□ -0.7
CHKA-207ENST00000533728 ITGB8P26012 769 aa10.69□□□□□ -0.7
CHKA-207ENST00000533728 CYLC1P35663 651 aaPredicted RBP10.69□□□□□ -0.7
CHKA-207ENST00000533728 SLC12A3P55017 1021 aa10.69□□□□□ -0.7
CHKA-207ENST00000533728 ERVK-24P63145 666 aa10.69□□□□□ -0.7
CHKA-207ENST00000533728 KRT83P78385 493 aa10.69□□□□□ -0.7
CHKA-207ENST00000533728 FKBP3Q00688 224 aaKnown RBP10.69□□□□□ -0.7
CHKA-207ENST00000533728 PPP2R3AQ06190 1150 aa10.69□□□□□ -0.7
CHKA-207ENST00000533728 TNFAIP1Q13829 316 aa10.69□□□□□ -0.7
CHKA-207ENST00000533728 RRP1BQ14684 758 aaKnown RBP10.69□□□□□ -0.7
CHKA-207ENST00000533728 EDRF1Q3B7T1 1238 aa10.69□□□□□ -0.7
CHKA-207ENST00000533728 VWA3BQ502W6 1294 aa10.69□□□□□ -0.7
CHKA-207ENST00000533728 LRRC55Q6ZSA7 311 aa10.69□□□□□ -0.7
CHKA-207ENST00000533728 ERMP1Q7Z2K6 904 aa10.69□□□□□ -0.7
CHKA-207ENST00000533728 SYT2Q8N9I0 419 aaPredicted RBP10.69□□□□□ -0.7
CHKA-207ENST00000533728 EHBP1Q8NDI1 1231 aa10.69□□□□□ -0.7
CHKA-207ENST00000533728 CPLX3Q8WVH0 158 aa10.69□□□□□ -0.7
CHKA-207ENST00000533728 TEPSINQ96N21 525 aa10.69□□□□□ -0.7
CHKA-207ENST00000533728 NOC4LQ9BVI4 516 aaKnown RBP10.69□□□□□ -0.7
CHKA-207ENST00000533728 NUCKS1Q9H1E3 243 aaKnown RBP10.69□□□□□ -0.7
CHKA-207ENST00000533728 HAUS4Q9H6D7 363 aa10.69□□□□□ -0.7
CHKA-207ENST00000533728 MRPL44Q9H9J2 332 aaKnown RBP10.69□□□□□ -0.7
CHKA-207ENST00000533728 TUFT1Q9NNX1 390 aa10.69□□□□□ -0.7
CHKA-207ENST00000533728 SLC39A2Q9NP94 309 aa10.69□□□□□ -0.7
CHKA-207ENST00000533728 PANK4Q9NVE7 773 aa10.69□□□□□ -0.7
CHKA-207ENST00000533728 MAP3K20Q9NYL2 800 aaKnown RBP10.69□□□□□ -0.7
CHKA-207ENST00000533728 FAM184BQ9ULE4 1060 aa10.69□□□□□ -0.7
CHKA-207ENST00000533728 MRFAP1Q9Y605 127 aa10.69□□□□□ -0.7
CHKA-207ENST00000533728 REV3LO60673 3130 aa10.69□□□□□ -0.7
CHKA-207ENST00000533728 FAM208BQ5VWN6 2430 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 LOC285556D6RIA3 1793 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 OPLAHO14841 1288 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 TADA3O75528 432 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 URI1O94763 535 aaPredicted RBP10.68□□□□□ -0.7
CHKA-207ENST00000533728 NDUFA10O95299 355 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 FDX1P10109 184 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 BMP1P13497 986 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 CYP11B2P19099 503 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 CAP2P40123 477 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 JAG1P78504 1218 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 SMAD3P84022 425 aaKnown RBP10.68□□□□□ -0.7
CHKA-207ENST00000533728 SETQ01105 290 aaPredicted RBP10.68□□□□□ -0.7
CHKA-207ENST00000533728 ECM1Q16610 540 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 PTPN21Q16825 1174 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 BMT2Q1RMZ1 405 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 ARHGAP29Q52LW3 1261 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 NIPA1Q7RTP0 329 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 KCNK18Q7Z418 384 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 TXLNBQ8N3L3 684 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 MNS1Q8NEH6 495 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 LPAR1Q92633 364 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms