RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 AFAP1L2Q8N4X5 818 aa18.99■□□□□ 0.63
PHRF1-205ENST00000533464 NUB1Q9Y5A7 615 aa18.99■□□□□ 0.63
PHRF1-205ENST00000533464 SRGAP2O75044 1071 aa18.99■□□□□ 0.63
PHRF1-205ENST00000533464 RINT1Q6NUQ1 792 aa18.99■□□□□ 0.63
PHRF1-205ENST00000533464 DYDC2Q96IM9 177 aa18.99■□□□□ 0.63
PHRF1-205ENST00000533464 EPB41L4AQ9HCS5 686 aaPredicted RBP18.99■□□□□ 0.63
PHRF1-205ENST00000533464 PODXL2Q9NZ53 605 aa18.99■□□□□ 0.63
PHRF1-205ENST00000533464 PIM2Q9P1W9 311 aa18.99■□□□□ 0.63
PHRF1-205ENST00000533464 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.99■□□□□ 0.63
PHRF1-205ENST00000533464 GMNNO75496 209 aa18.99■□□□□ 0.63
PHRF1-205ENST00000533464 STAT3P40763 770 aa18.99■□□□□ 0.63
PHRF1-205ENST00000533464 GUF1Q8N442 669 aaKnown RBP18.99■□□□□ 0.63
PHRF1-205ENST00000533464 SENP2Q9HC62 589 aa18.99■□□□□ 0.63
PHRF1-205ENST00000533464 STK38LQ9Y2H1 464 aa18.99■□□□□ 0.63
PHRF1-205ENST00000533464 ADGRG1Q9Y653 693 aa18.99■□□□□ 0.63
PHRF1-205ENST00000533464 CYP4F22Q6NT55 531 aa18.99■□□□□ 0.63
PHRF1-205ENST00000533464 MARCH10Q8NA82 808 aaPredicted RBP18.98■□□□□ 0.63
PHRF1-205ENST00000533464 XPOTO43592 962 aaKnown RBP18.98■□□□□ 0.63
PHRF1-205ENST00000533464 ABL1P00519 1130 aa18.98■□□□□ 0.63
PHRF1-205ENST00000533464 FDPSP14324 419 aaKnown RBP18.98■□□□□ 0.63
PHRF1-205ENST00000533464 RASSF2P50749 326 aa18.98■□□□□ 0.63
PHRF1-205ENST00000533464 EXOC8Q8IYI6 725 aa18.98■□□□□ 0.63
PHRF1-205ENST00000533464 MSTO1Q9BUK6 570 aa18.98■□□□□ 0.63
PHRF1-205ENST00000533464 PHF20Q9BVI0 1012 aa18.98■□□□□ 0.63
PHRF1-205ENST00000533464 PNMA6AP0CW24 399 aaPredicted RBP18.98■□□□□ 0.63
PHRF1-205ENST00000533464 FCER1AP12319 257 aa18.98■□□□□ 0.63
PHRF1-205ENST00000533464 MARK3P27448 753 aa18.98■□□□□ 0.63
PHRF1-205ENST00000533464 JAK3P52333 1124 aa18.98■□□□□ 0.63
PHRF1-205ENST00000533464 KNOP1Q1ED39 458 aaKnown RBP18.98■□□□□ 0.63
PHRF1-205ENST00000533464 TBC1D16Q8TBP0 767 aa18.98■□□□□ 0.63
PHRF1-205ENST00000533464 FEM1BQ9UK73 627 aa18.98■□□□□ 0.63
PHRF1-205ENST00000533464 LIG3P49916 1009 aa18.98■□□□□ 0.63
PHRF1-205ENST00000533464 DPF2Q92785 391 aa18.98■□□□□ 0.63
PHRF1-205ENST00000533464 POLR1AO95602 1720 aaPredicted RBP18.98■□□□□ 0.63
PHRF1-205ENST00000533464 PALMO75781 387 aa18.97■□□□□ 0.63
PHRF1-205ENST00000533464 KRT1P04264 644 aa18.97■□□□□ 0.63
PHRF1-205ENST00000533464 RPS6KC1Q96S38 1066 aa18.97■□□□□ 0.63
PHRF1-205ENST00000533464 PIK3C2BO00750 1634 aa18.97■□□□□ 0.63
PHRF1-205ENST00000533464 GCLMP48507 274 aa18.97■□□□□ 0.63
PHRF1-205ENST00000533464 IQCB1Q15051 598 aa18.97■□□□□ 0.63
PHRF1-205ENST00000533464 C7orf31Q8N865 590 aa18.97■□□□□ 0.63
PHRF1-205ENST00000533464 XXYLT1Q8NBI6 393 aa18.97■□□□□ 0.63
PHRF1-205ENST00000533464 PPP1R16BQ96T49 567 aa18.97■□□□□ 0.63
PHRF1-205ENST00000533464 SPZ1Q9BXG8 430 aa18.97■□□□□ 0.63
PHRF1-205ENST00000533464 ZHX2Q9Y6X8 837 aa18.97■□□□□ 0.63
PHRF1-205ENST00000533464 ABCB11O95342 1321 aa18.97■□□□□ 0.63
PHRF1-205ENST00000533464 NKX1-1Q15270 411 aaPredicted RBP18.97■□□□□ 0.63
PHRF1-205ENST00000533464 CD2APQ9Y5K6 639 aa18.97■□□□□ 0.63
PHRF1-205ENST00000533464 DYNLT1P63172 113 aa18.97■□□□□ 0.63
PHRF1-205ENST00000533464 GFPT1Q06210 699 aaPredicted RBP18.97■□□□□ 0.63
PHRF1-205ENST00000533464 SPATS2Q86XZ4 545 aaKnown RBP18.97■□□□□ 0.63
PHRF1-205ENST00000533464 NLRP4Q96MN2 994 aa18.97■□□□□ 0.63
PHRF1-205ENST00000533464 DAGLAQ9Y4D2 1042 aa18.97■□□□□ 0.63
PHRF1-205ENST00000533464 WDR64B1ANS9 1081 aa18.97■□□□□ 0.63
PHRF1-205ENST00000533464 NTSR2O95665 410 aa18.97■□□□□ 0.63
PHRF1-205ENST00000533464 Q3C1V9 767 aa18.97■□□□□ 0.63
PHRF1-205ENST00000533464 SBK1Q52WX2 424 aa18.97■□□□□ 0.63
PHRF1-205ENST00000533464 PPP1R2P3Q6NXS1 205 aa18.97■□□□□ 0.63
PHRF1-205ENST00000533464 ANAPC5Q9UJX4 755 aa18.97■□□□□ 0.63
PHRF1-205ENST00000533464 CTDNEP1O95476 244 aa18.96■□□□□ 0.63
PHRF1-205ENST00000533464 FGGP02679 453 aa18.96■□□□□ 0.63
PHRF1-205ENST00000533464 TPD52P55327 224 aaPredicted RBP18.96■□□□□ 0.63
PHRF1-205ENST00000533464 ADCY1Q08828 1119 aa18.96■□□□□ 0.63
PHRF1-205ENST00000533464 RHOT2Q8IXI1 618 aa18.96■□□□□ 0.63
PHRF1-205ENST00000533464 KAZALD1Q96I82 304 aa18.96■□□□□ 0.63
PHRF1-205ENST00000533464 ZNF277Q9NRM2 450 aaPredicted RBP18.96■□□□□ 0.63
PHRF1-205ENST00000533464 TBC1D22BQ9NU19 505 aa18.96■□□□□ 0.63
PHRF1-205ENST00000533464 NLRP7Q8WX94 980 aa18.96■□□□□ 0.63
PHRF1-205ENST00000533464 PPP1R12CQ9BZL4 782 aa18.96■□□□□ 0.63
PHRF1-205ENST00000533464 MTMR4Q9NYA4 1195 aa18.96■□□□□ 0.63
PHRF1-205ENST00000533464 LRRD1A4D1F6 860 aa18.96■□□□□ 0.63
PHRF1-205ENST00000533464 IREB2P48200 963 aaKnown RBP18.96■□□□□ 0.63
PHRF1-205ENST00000533464 SPP2Q13103 211 aa18.96■□□□□ 0.63
PHRF1-205ENST00000533464 SPOUT1Q5T280 376 aaKnown RBP18.96■□□□□ 0.63
PHRF1-205ENST00000533464 CALN1Q9BXU9 219 aa18.96■□□□□ 0.63
PHRF1-205ENST00000533464 NFU1Q9UMS0 254 aa18.96■□□□□ 0.63
PHRF1-205ENST00000533464 A0A1B0GUA9 196 aa18.96■□□□□ 0.63
PHRF1-205ENST00000533464 DR1Q01658 176 aa18.96■□□□□ 0.63
PHRF1-205ENST00000533464 NAA30Q147X3 362 aaPredicted RBP18.96■□□□□ 0.63
PHRF1-205ENST00000533464 SLFN12LQ6IEE8 588 aa18.96■□□□□ 0.63
PHRF1-205ENST00000533464 SCARA5Q6ZMJ2 495 aa18.96■□□□□ 0.63
PHRF1-205ENST00000533464 WRNIP1Q96S55 665 aa18.96■□□□□ 0.63
PHRF1-205ENST00000533464 SLCO1A2P46721 670 aa18.95■□□□□ 0.62
PHRF1-205ENST00000533464 USP11P51784 963 aa18.95■□□□□ 0.62
PHRF1-205ENST00000533464 NNTQ13423 1086 aa18.95■□□□□ 0.62
PHRF1-205ENST00000533464 ITPK1Q13572 414 aa18.95■□□□□ 0.62
PHRF1-205ENST00000533464 TRIP13Q15645 432 aaPredicted RBP18.95■□□□□ 0.62
PHRF1-205ENST00000533464 PRR5LQ6MZQ0 368 aa18.95■□□□□ 0.62
PHRF1-205ENST00000533464 USP49Q70CQ1 688 aa18.95■□□□□ 0.62
PHRF1-205ENST00000533464 MCPH1Q8NEM0 835 aa18.95■□□□□ 0.62
PHRF1-205ENST00000533464 HAUS2Q9NVX0 235 aa18.95■□□□□ 0.62
PHRF1-205ENST00000533464 RC3H1Q5TC82 1133 aaKnown RBP18.95■□□□□ 0.62
PHRF1-205ENST00000533464 ARMC9Q7Z3E5 817 aa18.95■□□□□ 0.62
PHRF1-205ENST00000533464 WHAMMQ8TF30 809 aa18.95■□□□□ 0.62
PHRF1-205ENST00000533464 PFDN4Q9NQP4 134 aa18.95■□□□□ 0.62
PHRF1-205ENST00000533464 LRRC8CQ8TDW0 803 aa18.95■□□□□ 0.62
PHRF1-205ENST00000533464 PPP4R1Q8TF05 950 aa18.95■□□□□ 0.62
PHRF1-205ENST00000533464 FMO2Q99518 471 aa18.95■□□□□ 0.62
PHRF1-205ENST00000533464 SUGT1Q9Y2Z0 365 aa18.95■□□□□ 0.62
PHRF1-205ENST00000533464 FLT1P17948 1338 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms