RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 UIMC1Q96RL1 719 aa19.48■□□□□ 0.71
RPUSD4-207ENST00000532800 NAP1L2Q9ULW6 460 aaPredicted RBP19.48■□□□□ 0.71
RPUSD4-207ENST00000532800 PCDHA2Q9Y5H9 948 aa19.48■□□□□ 0.71
RPUSD4-207ENST00000532800 POTEB3A0JP26 581 aa19.47■□□□□ 0.71
RPUSD4-207ENST00000532800 hCG_1984214I3L0E3 225 aa19.47■□□□□ 0.71
RPUSD4-207ENST00000532800 CDC45O75419 566 aa19.47■□□□□ 0.71
RPUSD4-207ENST00000532800 ATG7O95352 703 aa19.47■□□□□ 0.71
RPUSD4-207ENST00000532800 RB1P06400 928 aa19.47■□□□□ 0.71
RPUSD4-207ENST00000532800 ADD1P35611 737 aaKnown RBP19.47■□□□□ 0.71
RPUSD4-207ENST00000532800 COL19A1Q14993 1142 aa19.47■□□□□ 0.71
RPUSD4-207ENST00000532800 JAKMIP3Q5VZ66 844 aa19.47■□□□□ 0.71
RPUSD4-207ENST00000532800 POTEBQ6S5H4 581 aa19.47■□□□□ 0.71
RPUSD4-207ENST00000532800 ZNF713Q8N859 430 aaPredicted RBP19.47■□□□□ 0.71
RPUSD4-207ENST00000532800 C11orf84Q9BUA3 381 aaPredicted RBP19.47■□□□□ 0.71
RPUSD4-207ENST00000532800 PADI3Q9ULW8 664 aa19.47■□□□□ 0.71
RPUSD4-207ENST00000532800 IGSF9BQ9UPX0 1349 aa19.47■□□□□ 0.71
RPUSD4-207ENST00000532800 C5orf42Q9H799 3197 aa19.46■□□□□ 0.71
RPUSD4-207ENST00000532800 IGKV6D-21A0A0A0MT36 114 aa19.46■□□□□ 0.71
RPUSD4-207ENST00000532800 FAM86B1E9PN63 330 aa19.46■□□□□ 0.71
RPUSD4-207ENST00000532800 M0QZ92 97 aa19.46■□□□□ 0.71
RPUSD4-207ENST00000532800 RPLP2P05387 115 aaKnown RBP19.46■□□□□ 0.71
RPUSD4-207ENST00000532800 FAM86B2P0C5J1 330 aa19.46■□□□□ 0.71
RPUSD4-207ENST00000532800 ZNF76P36508 570 aa19.46■□□□□ 0.71
RPUSD4-207ENST00000532800 KRT32Q14532 448 aa19.46■□□□□ 0.71
RPUSD4-207ENST00000532800 TMEM31Q5JXX7 168 aa19.46■□□□□ 0.71
RPUSD4-207ENST00000532800 MTHFD1LQ6UB35 978 aa19.46■□□□□ 0.71
RPUSD4-207ENST00000532800 CCDC60Q8IWA6 550 aaPredicted RBP19.46■□□□□ 0.71
RPUSD4-207ENST00000532800 TEX2Q8IWB9 1127 aa19.46■□□□□ 0.71
RPUSD4-207ENST00000532800 GJD3Q8N144 294 aa19.46■□□□□ 0.71
RPUSD4-207ENST00000532800 CRIPAKQ8N1N5 446 aa19.46■□□□□ 0.71
RPUSD4-207ENST00000532800 CELF4Q9BZC1 486 aaKnown RBP19.46■□□□□ 0.71
RPUSD4-207ENST00000532800 CLDND1Q9NY35 253 aa19.46■□□□□ 0.71
RPUSD4-207ENST00000532800 RWDD3Q9Y3V2 267 aa19.46■□□□□ 0.71
RPUSD4-207ENST00000532800 MRPL42Q9Y6G3 142 aaKnown RBP19.46■□□□□ 0.71
RPUSD4-207ENST00000532800 SQORQ9Y6N5 450 aa19.46■□□□□ 0.71
RPUSD4-207ENST00000532800 EVPLQ92817 2033 aa19.46■□□□□ 0.71
RPUSD4-207ENST00000532800 IGLV3-22A0A075B6J6 115 aa19.45■□□□□ 0.7
RPUSD4-207ENST00000532800 SMIM35A0A1B0GVV1 85 aa19.45■□□□□ 0.7
RPUSD4-207ENST00000532800 PI4K2BG5E9Z4 385 aa19.45■□□□□ 0.7
RPUSD4-207ENST00000532800 BACH1O14867 736 aa19.45■□□□□ 0.7
RPUSD4-207ENST00000532800 GATMP50440 423 aa19.45■□□□□ 0.7
RPUSD4-207ENST00000532800 METAP2P50579 478 aaKnown RBP eCLIP19.45■□□□□ 0.7
RPUSD4-207ENST00000532800 APOBRQ0VD83 1088 aa19.45■□□□□ 0.7
RPUSD4-207ENST00000532800 PAK2Q13177 524 aa19.45■□□□□ 0.7
RPUSD4-207ENST00000532800 PFKFB3Q16875 520 aaPredicted RBP19.45■□□□□ 0.7
RPUSD4-207ENST00000532800 TMEM266Q2M3C6 531 aa19.45■□□□□ 0.7
RPUSD4-207ENST00000532800 PAN2Q504Q3 1202 aaKnown RBP19.45■□□□□ 0.7
RPUSD4-207ENST00000532800 ABHD15Q6UXT9 468 aa19.45■□□□□ 0.7
RPUSD4-207ENST00000532800 NIPA1Q7RTP0 329 aa19.45■□□□□ 0.7
RPUSD4-207ENST00000532800 PLA2G4DQ86XP0 818 aa19.45■□□□□ 0.7
RPUSD4-207ENST00000532800 CRYGNQ8WXF5 182 aa19.45■□□□□ 0.7
RPUSD4-207ENST00000532800 TNPO1Q92973 898 aaKnown RBP19.45■□□□□ 0.7
RPUSD4-207ENST00000532800 FTHL17Q9BXU8 183 aa19.45■□□□□ 0.7
RPUSD4-207ENST00000532800 LMAN2LQ9H0V9 348 aa19.45■□□□□ 0.7
RPUSD4-207ENST00000532800 TMX1Q9H3N1 280 aa19.45■□□□□ 0.7
RPUSD4-207ENST00000532800 ALG13Q9NP73 1137 aaKnown RBP19.45■□□□□ 0.7
RPUSD4-207ENST00000532800 DHX15O43143 795 aaKnown RBP19.44■□□□□ 0.7
RPUSD4-207ENST00000532800 SCG2P13521 617 aa19.44■□□□□ 0.7
RPUSD4-207ENST00000532800 IBSPP21815 317 aaPredicted RBP19.44■□□□□ 0.7
RPUSD4-207ENST00000532800 KLRC1P26715 233 aa19.44■□□□□ 0.7
RPUSD4-207ENST00000532800 SSTR3P32745 418 aaPredicted RBP19.44■□□□□ 0.7
RPUSD4-207ENST00000532800 GTF2F1P35269 517 aaKnown RBP eCLIP19.44■□□□□ 0.7
RPUSD4-207ENST00000532800 LTBRP36941 435 aa19.44■□□□□ 0.7
RPUSD4-207ENST00000532800 PLA2G5P39877 138 aa19.44■□□□□ 0.7
RPUSD4-207ENST00000532800 RCAN1P53805 252 aa19.44■□□□□ 0.7
RPUSD4-207ENST00000532800 KRT76Q01546 638 aa19.44■□□□□ 0.7
RPUSD4-207ENST00000532800 HYAL1Q12794 435 aa19.44■□□□□ 0.7
RPUSD4-207ENST00000532800 Q6ZUG5 572 aa19.44■□□□□ 0.7
RPUSD4-207ENST00000532800 NPAS4Q8IUM7 802 aa19.44■□□□□ 0.7
RPUSD4-207ENST00000532800 GLT8D2Q9H1C3 349 aa19.44■□□□□ 0.7
RPUSD4-207ENST00000532800 KDM3AQ9Y4C1 1321 aa19.44■□□□□ 0.7
RPUSD4-207ENST00000532800 HBP1O60381 514 aa19.43■□□□□ 0.7
RPUSD4-207ENST00000532800 MMP1P03956 469 aa19.43■□□□□ 0.7
RPUSD4-207ENST00000532800 SLC26A2P50443 739 aa19.43■□□□□ 0.7
RPUSD4-207ENST00000532800 FGD1P98174 961 aa19.43■□□□□ 0.7
RPUSD4-207ENST00000532800 DLX2Q07687 328 aaPredicted RBP19.43■□□□□ 0.7
RPUSD4-207ENST00000532800 CAMK1Q14012 370 aa19.43■□□□□ 0.7
RPUSD4-207ENST00000532800 PUS10Q3MIT2 529 aaKnown RBP19.43■□□□□ 0.7
RPUSD4-207ENST00000532800 FAM160B1Q5W0V3 765 aa19.43■□□□□ 0.7
RPUSD4-207ENST00000532800 PDXDC2PQ6P474 469 aa19.43■□□□□ 0.7
RPUSD4-207ENST00000532800 CMTR2Q8IYT2 770 aaKnown RBP19.43■□□□□ 0.7
RPUSD4-207ENST00000532800 ATP8B4Q8TF62 1192 aa19.43■□□□□ 0.7
RPUSD4-207ENST00000532800 BRF1Q92994 677 aa19.43■□□□□ 0.7
RPUSD4-207ENST00000532800 CDHR5Q9HBB8 845 aa19.43■□□□□ 0.7
RPUSD4-207ENST00000532800 GINS2Q9Y248 185 aa19.43■□□□□ 0.7
RPUSD4-207ENST00000532800 MYH9P35579 1960 aaKnown RBP19.43■□□□□ 0.7
RPUSD4-207ENST00000532800 PLXNA4Q9HCM2 1894 aa19.42■□□□□ 0.7
RPUSD4-207ENST00000532800 ZBTB42B2RXF5 422 aa19.42■□□□□ 0.7
RPUSD4-207ENST00000532800 IPO5O00410 1097 aaKnown RBP19.42■□□□□ 0.7
RPUSD4-207ENST00000532800 MGEA5O60502 916 aa19.42■□□□□ 0.7
RPUSD4-207ENST00000532800 GPR37L1O60883 481 aa19.42■□□□□ 0.7
RPUSD4-207ENST00000532800 CYP3A4P08684 503 aa19.42■□□□□ 0.7
RPUSD4-207ENST00000532800 HMGB1P09429 215 aaKnown RBP19.42■□□□□ 0.7
RPUSD4-207ENST00000532800 ATP4AP20648 1035 aa19.42■□□□□ 0.7
RPUSD4-207ENST00000532800 DNAJB1P25685 340 aa19.42■□□□□ 0.7
RPUSD4-207ENST00000532800 NFX1Q12986 1120 aaKnown RBP19.42■□□□□ 0.7
RPUSD4-207ENST00000532800 CLUL1Q15846 466 aa19.42■□□□□ 0.7
RPUSD4-207ENST00000532800 PKN1Q16512 942 aa19.42■□□□□ 0.7
RPUSD4-207ENST00000532800 CTC1Q2NKJ3 1217 aa19.42■□□□□ 0.7
RPUSD4-207ENST00000532800 SWSAP1Q6NVH7 229 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms