RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 GOLGA8BA8MQT2 603 aa17.32■□□□□ 0.36
BRPF3-210ENST00000532538 C5orf67F2Z3F1 127 aa17.32■□□□□ 0.36
BRPF3-210ENST00000532538 DGKIO75912 1065 aa17.32■□□□□ 0.36
BRPF3-210ENST00000532538 ARP10275 920 aa17.32■□□□□ 0.36
BRPF3-210ENST00000532538 COL9A3Q14050 684 aaPredicted RBP17.32■□□□□ 0.36
BRPF3-210ENST00000532538 FAM160B1Q5W0V3 765 aa17.32■□□□□ 0.36
BRPF3-210ENST00000532538 APOA5Q6Q788 366 aa17.32■□□□□ 0.36
BRPF3-210ENST00000532538 TRMT1LQ7Z2T5 733 aaKnown RBP17.32■□□□□ 0.36
BRPF3-210ENST00000532538 SGMS1Q86VZ5 419 aa17.32■□□□□ 0.36
BRPF3-210ENST00000532538 CKAP2LQ8IYA6 745 aa17.32■□□□□ 0.36
BRPF3-210ENST00000532538 CELF4Q9BZC1 486 aaKnown RBP17.32■□□□□ 0.36
BRPF3-210ENST00000532538 PADI3Q9ULW8 664 aa17.32■□□□□ 0.36
BRPF3-210ENST00000532538 PCDHA2Q9Y5H9 948 aa17.32■□□□□ 0.36
BRPF3-210ENST00000532538 PLXNA4Q9HCM2 1894 aa17.32■□□□□ 0.36
BRPF3-210ENST00000532538 FNDC1Q4ZHG4 1894 aaPredicted RBP17.31■□□□□ 0.36
BRPF3-210ENST00000532538 SCG2P13521 617 aa17.31■□□□□ 0.36
BRPF3-210ENST00000532538 NDUFV1P49821 464 aa17.31■□□□□ 0.36
BRPF3-210ENST00000532538 KRT76Q01546 638 aa17.31■□□□□ 0.36
BRPF3-210ENST00000532538 TMEM266Q2M3C6 531 aa17.31■□□□□ 0.36
BRPF3-210ENST00000532538 CEP55Q53EZ4 464 aa17.31■□□□□ 0.36
BRPF3-210ENST00000532538 PPP1R18Q6NYC8 613 aa17.31■□□□□ 0.36
BRPF3-210ENST00000532538 PLPPR4Q7Z2D5 763 aa17.31■□□□□ 0.36
BRPF3-210ENST00000532538 NPAS4Q8IUM7 802 aa17.31■□□□□ 0.36
BRPF3-210ENST00000532538 PCYT2Q99447 389 aa17.31■□□□□ 0.36
BRPF3-210ENST00000532538 PLVAPQ9BX97 442 aa17.31■□□□□ 0.36
BRPF3-210ENST00000532538 GLT8D2Q9H1C3 349 aa17.31■□□□□ 0.36
BRPF3-210ENST00000532538 AGO4Q9HCK5 861 aaKnown RBP17.31■□□□□ 0.36
BRPF3-210ENST00000532538 C11orf16Q9NQ32 467 aa17.31■□□□□ 0.36
BRPF3-210ENST00000532538 TMEM260Q9NX78 707 aa17.31■□□□□ 0.36
BRPF3-210ENST00000532538 PCDHB7Q9Y5E2 793 aa17.31■□□□□ 0.36
BRPF3-210ENST00000532538 MRPL42Q9Y6G3 142 aaKnown RBP17.31■□□□□ 0.36
BRPF3-210ENST00000532538 KLF18A0A0U1RQI7 1052 aa17.3■□□□□ 0.36
BRPF3-210ENST00000532538 DENND3A2RUS2 1198 aa17.3■□□□□ 0.36
BRPF3-210ENST00000532538 PRR33A8MZF0 331 aa17.3■□□□□ 0.36
BRPF3-210ENST00000532538 DCXO43602 365 aa17.3■□□□□ 0.36
BRPF3-210ENST00000532538 PPFIA3O75145 1194 aa17.3■□□□□ 0.36
BRPF3-210ENST00000532538 HYAL1Q12794 435 aa17.3■□□□□ 0.36
BRPF3-210ENST00000532538 JAKMIP3Q5VZ66 844 aa17.3■□□□□ 0.36
BRPF3-210ENST00000532538 MTHFD1LQ6UB35 978 aa17.3■□□□□ 0.36
BRPF3-210ENST00000532538 DHX32Q7L7V1 743 aaKnown RBP17.3■□□□□ 0.36
BRPF3-210ENST00000532538 PLA2G4DQ86XP0 818 aa17.3■□□□□ 0.36
BRPF3-210ENST00000532538 CMTR2Q8IYT2 770 aaKnown RBP17.3■□□□□ 0.36
BRPF3-210ENST00000532538 NME8Q8N427 588 aa17.3■□□□□ 0.36
BRPF3-210ENST00000532538 MICAL1Q8TDZ2 1067 aa17.3■□□□□ 0.36
BRPF3-210ENST00000532538 CLP1Q92989 425 aaKnown RBP17.3■□□□□ 0.36
BRPF3-210ENST00000532538 ZNF689Q96CS4 500 aaPredicted RBP17.3■□□□□ 0.36
BRPF3-210ENST00000532538 PPP1R16BQ96T49 567 aa17.3■□□□□ 0.36
BRPF3-210ENST00000532538 UPF3BQ9BZI7 483 aaKnown RBP17.3■□□□□ 0.36
BRPF3-210ENST00000532538 PRKAG3Q9UGI9 489 aa17.3■□□□□ 0.36
BRPF3-210ENST00000532538 SQORQ9Y6N5 450 aa17.3■□□□□ 0.36
BRPF3-210ENST00000532538 SMIM35A0A1B0GVV1 85 aa17.29■□□□□ 0.36
BRPF3-210ENST00000532538 hCG_1984214I3L0E3 225 aa17.29■□□□□ 0.36
BRPF3-210ENST00000532538 HBP1O60381 514 aa17.29■□□□□ 0.36
BRPF3-210ENST00000532538 MMP1P03956 469 aa17.29■□□□□ 0.36
BRPF3-210ENST00000532538 KLRC1P26715 233 aa17.29■□□□□ 0.36
BRPF3-210ENST00000532538 GTF2F1P35269 517 aaKnown RBP eCLIP17.29■□□□□ 0.36
BRPF3-210ENST00000532538 AP3B2Q13367 1082 aa17.29■□□□□ 0.36
BRPF3-210ENST00000532538 ODR4Q5SWX8 454 aa17.29■□□□□ 0.36
BRPF3-210ENST00000532538 PDXDC2PQ6P474 469 aa17.29■□□□□ 0.36
BRPF3-210ENST00000532538 ADHFE1Q8IWW8 467 aa17.29■□□□□ 0.36
BRPF3-210ENST00000532538 ZNF713Q8N859 430 aaPredicted RBP17.29■□□□□ 0.36
BRPF3-210ENST00000532538 LINC01599Q8WXQ3 324 aa17.29■□□□□ 0.36
BRPF3-210ENST00000532538 POP1Q99575 1024 aaKnown RBP17.29■□□□□ 0.36
BRPF3-210ENST00000532538 ZNF302Q9NR11 478 aa17.29■□□□□ 0.36
BRPF3-210ENST00000532538 PLAGL2Q9UPG8 496 aa17.29■□□□□ 0.36
BRPF3-210ENST00000532538 IGSF9BQ9UPX0 1349 aa17.28■□□□□ 0.36
BRPF3-210ENST00000532538 STXBP3O00186 592 aa17.28■□□□□ 0.36
BRPF3-210ENST00000532538 RPS6KA5O75582 802 aa17.28■□□□□ 0.36
BRPF3-210ENST00000532538 SLC26A2P50443 739 aa17.28■□□□□ 0.36
BRPF3-210ENST00000532538 ZP2Q05996 745 aa17.28■□□□□ 0.36
BRPF3-210ENST00000532538 ITGB3BPQ13352 177 aaPredicted RBP17.28■□□□□ 0.36
BRPF3-210ENST00000532538 TYW1BQ6NUM6 668 aa17.28■□□□□ 0.36
BRPF3-210ENST00000532538 MIS18BP1Q6P0N0 1132 aa17.28■□□□□ 0.36
BRPF3-210ENST00000532538 RBM23Q86U06 439 aaKnown RBP17.28■□□□□ 0.36
BRPF3-210ENST00000532538 RTN4RL1Q86UN2 441 aaPredicted RBP17.28■□□□□ 0.36
BRPF3-210ENST00000532538 KLHL23Q8NBE8 558 aa17.28■□□□□ 0.36
BRPF3-210ENST00000532538 P2RX5Q93086 422 aa17.28■□□□□ 0.36
BRPF3-210ENST00000532538 RC3H2Q9HBD1 1191 aaKnown RBP17.28■□□□□ 0.36
BRPF3-210ENST00000532538 RNF216Q9NWF9 866 aaPredicted RBP17.28■□□□□ 0.36
BRPF3-210ENST00000532538 BARHL2Q9NY43 387 aa17.28■□□□□ 0.36
BRPF3-210ENST00000532538 CD207Q9UJ71 328 aa17.28■□□□□ 0.36
BRPF3-210ENST00000532538 BRPF3Q9ULD4 1205 aa17.28■□□□□ 0.36
BRPF3-210ENST00000532538 ARIH1Q9Y4X5 557 aaPredicted RBP17.28■□□□□ 0.36
BRPF3-210ENST00000532538 PCDHB12Q9Y5F1 795 aa17.28■□□□□ 0.36
BRPF3-210ENST00000532538 LINC01565O15544 149 aa17.27■□□□□ 0.36
BRPF3-210ENST00000532538 MBTPS2O43462 519 aa17.27■□□□□ 0.36
BRPF3-210ENST00000532538 ITGB1P05556 798 aa17.27■□□□□ 0.36
BRPF3-210ENST00000532538 LTBRP36941 435 aa17.27■□□□□ 0.36
BRPF3-210ENST00000532538 GATMP50440 423 aa17.27■□□□□ 0.36
BRPF3-210ENST00000532538 AKAP17AQ02040 695 aaKnown RBP17.27■□□□□ 0.36
BRPF3-210ENST00000532538 DLX2Q07687 328 aaPredicted RBP17.27■□□□□ 0.36
BRPF3-210ENST00000532538 KRT32Q14532 448 aa17.27■□□□□ 0.36
BRPF3-210ENST00000532538 NAALADL2Q58DX5 795 aa17.27■□□□□ 0.36
BRPF3-210ENST00000532538 SWSAP1Q6NVH7 229 aa17.27■□□□□ 0.36
BRPF3-210ENST00000532538 METTL13Q8N6R0 699 aa17.27■□□□□ 0.36
BRPF3-210ENST00000532538 POF1BQ8WVV4 589 aa17.27■□□□□ 0.36
BRPF3-210ENST00000532538 AAASQ9NRG9 546 aa17.27■□□□□ 0.36
BRPF3-210ENST00000532538 SAMM50Q9Y512 469 aa17.27■□□□□ 0.36
BRPF3-210ENST00000532538 TBKBP1A7MCY6 615 aa17.26■□□□□ 0.35
BRPF3-210ENST00000532538 MEIS1O00470 390 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms