RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 HBP1O60381 514 aa21.47■■□□□ 1.03
UBXN1-211ENST00000531056 GAS7O60861 476 aa21.47■■□□□ 1.03
UBXN1-211ENST00000531056 MMP1P03956 469 aa21.47■■□□□ 1.03
UBXN1-211ENST00000531056 NR5A1Q13285 461 aa21.47■■□□□ 1.03
UBXN1-211ENST00000531056 LETM2Q2VYF4 491 aa21.47■■□□□ 1.03
UBXN1-211ENST00000531056 B3GNT9Q6UX72 402 aa21.47■■□□□ 1.03
UBXN1-211ENST00000531056 NEK8Q86SG6 692 aa21.47■■□□□ 1.03
UBXN1-211ENST00000531056 ZSCAN31Q96LW9 406 aaPredicted RBP21.47■■□□□ 1.03
UBXN1-211ENST00000531056 TEKT3Q9BXF9 490 aa21.47■■□□□ 1.03
UBXN1-211ENST00000531056 UNC45AQ9H3U1 944 aa21.47■■□□□ 1.03
UBXN1-211ENST00000531056 ZNF576Q9H609 170 aa21.47■■□□□ 1.03
UBXN1-211ENST00000531056 DDX25Q9UHL0 483 aaKnown RBP21.47■■□□□ 1.03
UBXN1-211ENST00000531056 MSRAQ9UJ68 235 aa21.47■■□□□ 1.03
UBXN1-211ENST00000531056 PCDHA11Q9Y5I1 949 aa21.47■■□□□ 1.03
UBXN1-211ENST00000531056 COL1A2P08123 1366 aa21.47■■□□□ 1.03
UBXN1-211ENST00000531056 ABHD14A-ACY1A0A1B0GW23 586 aa21.46■■□□□ 1.03
UBXN1-211ENST00000531056 FAM205CA6NFA0 338 aa21.46■■□□□ 1.03
UBXN1-211ENST00000531056 ZBTB42B2RXF5 422 aa21.46■■□□□ 1.03
UBXN1-211ENST00000531056 CHRNA1P02708 482 aa21.46■■□□□ 1.03
UBXN1-211ENST00000531056 RABEP1Q15276 862 aa21.46■■□□□ 1.03
UBXN1-211ENST00000531056 PPP4R3AQ6IN85 833 aa21.46■■□□□ 1.03
UBXN1-211ENST00000531056 DBF4BQ8NFT6 615 aa21.46■■□□□ 1.03
UBXN1-211ENST00000531056 DNAJB3Q8WWF6 145 aa21.46■■□□□ 1.03
UBXN1-211ENST00000531056 CDX2Q99626 313 aaPredicted RBP21.46■■□□□ 1.03
UBXN1-211ENST00000531056 LLPHQ9BRT6 129 aaKnown RBP21.46■■□□□ 1.03
UBXN1-211ENST00000531056 NKX2-4Q9H2Z4 354 aa21.46■■□□□ 1.03
UBXN1-211ENST00000531056 BRMS1Q9HCU9 246 aa21.46■■□□□ 1.03
UBXN1-211ENST00000531056 SH2B1Q9NRF2 756 aaPredicted RBP21.46■■□□□ 1.03
UBXN1-211ENST00000531056 DISC1Q9NRI5 854 aa21.46■■□□□ 1.03
UBXN1-211ENST00000531056 GABBR1Q9UBS5 961 aa21.46■■□□□ 1.03
UBXN1-211ENST00000531056 PCDHA2Q9Y5H9 948 aa21.46■■□□□ 1.03
UBXN1-211ENST00000531056 MYOGP15173 224 aa21.45■■□□□ 1.02
UBXN1-211ENST00000531056 GCFC2P16383 781 aaKnown RBP21.45■■□□□ 1.02
UBXN1-211ENST00000531056 SFNP31947 248 aa21.45■■□□□ 1.02
UBXN1-211ENST00000531056 KCNJ6P48051 423 aa21.45■■□□□ 1.02
UBXN1-211ENST00000531056 FOSBP53539 338 aa21.45■■□□□ 1.02
UBXN1-211ENST00000531056 DEFB103AP81534 67 aa21.45■■□□□ 1.02
UBXN1-211ENST00000531056 IKBKEQ14164 716 aa21.45■■□□□ 1.02
UBXN1-211ENST00000531056 KRT40Q6A162 431 aa21.45■■□□□ 1.02
UBXN1-211ENST00000531056 MTHFD1LQ6UB35 978 aa21.45■■□□□ 1.02
UBXN1-211ENST00000531056 RSPH3Q86UC2 560 aa21.45■■□□□ 1.02
UBXN1-211ENST00000531056 HERC6Q8IVU3 1022 aa21.45■■□□□ 1.02
UBXN1-211ENST00000531056 BBXQ8WY36 941 aaPredicted RBP21.45■■□□□ 1.02
UBXN1-211ENST00000531056 KCNMB3Q9NPA1 279 aa21.45■■□□□ 1.02
UBXN1-211ENST00000531056 SAMM50Q9Y512 469 aa21.45■■□□□ 1.02
UBXN1-211ENST00000531056 CHMP2AO43633 222 aa21.44■■□□□ 1.02
UBXN1-211ENST00000531056 EFCAB14O75071 495 aa21.44■■□□□ 1.02
UBXN1-211ENST00000531056 RPLP2P05387 115 aaKnown RBP21.44■■□□□ 1.02
UBXN1-211ENST00000531056 JAK3P52333 1124 aa21.44■■□□□ 1.02
UBXN1-211ENST00000531056 GRIN2CQ14957 1233 aa21.44■■□□□ 1.02
UBXN1-211ENST00000531056 ZNF484Q5JVG2 852 aa21.44■■□□□ 1.02
UBXN1-211ENST00000531056 RDM1Q8NG50 284 aa21.44■■□□□ 1.02
UBXN1-211ENST00000531056 UPF2Q9HAU5 1272 aaKnown RBP21.44■■□□□ 1.02
UBXN1-211ENST00000531056 SMIM35A0A1B0GVV1 85 aa21.43■■□□□ 1.02
UBXN1-211ENST00000531056 BTBD18B2RXH4 712 aa21.43■■□□□ 1.02
UBXN1-211ENST00000531056 ZNF862O60290 1169 aa21.43■■□□□ 1.02
UBXN1-211ENST00000531056 MRPS6P82932 125 aaKnown RBP21.43■■□□□ 1.02
UBXN1-211ENST00000531056 UGCGQ16739 394 aa21.43■■□□□ 1.02
UBXN1-211ENST00000531056 DIS3L2Q8IYB7 885 aaKnown RBP21.43■■□□□ 1.02
UBXN1-211ENST00000531056 SEPT8Q92599 483 aa21.43■■□□□ 1.02
UBXN1-211ENST00000531056 NAP1L4Q99733 375 aaKnown RBP21.43■■□□□ 1.02
UBXN1-211ENST00000531056 FAM49AQ9H0Q0 323 aaPredicted RBP21.43■■□□□ 1.02
UBXN1-211ENST00000531056 CDY2AQ9Y6F7 541 aa21.43■■□□□ 1.02
UBXN1-211ENST00000531056 LOXHD1Q8IVV2 1947 aa21.43■■□□□ 1.02
UBXN1-211ENST00000531056 CHD9Q3L8U1 2897 aa21.42■■□□□ 1.02
UBXN1-211ENST00000531056 CCNT1O60563 726 aaKnown RBP21.42■■□□□ 1.02
UBXN1-211ENST00000531056 KLRC1P26715 233 aa21.42■■□□□ 1.02
UBXN1-211ENST00000531056 TRIM29Q14134 588 aa21.42■■□□□ 1.02
UBXN1-211ENST00000531056 LPIN1Q14693 890 aa21.42■■□□□ 1.02
UBXN1-211ENST00000531056 MIER3Q7Z3K6 550 aa21.42■■□□□ 1.02
UBXN1-211ENST00000531056 TMCO2Q7Z6W1 182 aaPredicted RBP21.42■■□□□ 1.02
UBXN1-211ENST00000531056 CKAP2LQ8IYA6 745 aa21.42■■□□□ 1.02
UBXN1-211ENST00000531056 MYLIPQ8WY64 445 aa21.42■■□□□ 1.02
UBXN1-211ENST00000531056 FAM167AQ96KS9 214 aa21.42■■□□□ 1.02
UBXN1-211ENST00000531056 FAM20AQ96MK3 541 aa21.42■■□□□ 1.02
UBXN1-211ENST00000531056 TBC1D32Q96NH3 1257 aa21.42■■□□□ 1.02
UBXN1-211ENST00000531056 VAV3Q9UKW4 847 aa21.42■■□□□ 1.02
UBXN1-211ENST00000531056 EVPLQ92817 2033 aa21.41■■□□□ 1.02
UBXN1-211ENST00000531056 C22orf31O95567 290 aa21.41■■□□□ 1.02
UBXN1-211ENST00000531056 GHRP10912 638 aa21.41■■□□□ 1.02
UBXN1-211ENST00000531056 HMGN5P82970 282 aaKnown RBP21.41■■□□□ 1.02
UBXN1-211ENST00000531056 PRKCEQ02156 737 aa21.41■■□□□ 1.02
UBXN1-211ENST00000531056 FBXO47Q5MNV8 452 aa21.41■■□□□ 1.02
UBXN1-211ENST00000531056 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.41■■□□□ 1.02
UBXN1-211ENST00000531056 POTEDQ86YR6 584 aa21.41■■□□□ 1.02
UBXN1-211ENST00000531056 IL27Q8NEV9 243 aa21.41■■□□□ 1.02
UBXN1-211ENST00000531056 HAS1Q92839 578 aa21.41■■□□□ 1.02
UBXN1-211ENST00000531056 APBB2Q92870 758 aa21.41■■□□□ 1.02
UBXN1-211ENST00000531056 IFIH1Q9BYX4 1025 aaKnown RBP21.41■■□□□ 1.02
UBXN1-211ENST00000531056 SLC28A3Q9HAS3 691 aa21.41■■□□□ 1.02
UBXN1-211ENST00000531056 COL6A3P12111 3177 aa21.41■■□□□ 1.02
UBXN1-211ENST00000531056 TBX3O15119 743 aa21.4■■□□□ 1.02
UBXN1-211ENST00000531056 ST18O60284 1047 aa21.4■■□□□ 1.02
UBXN1-211ENST00000531056 OATP04181 439 aa21.4■■□□□ 1.02
UBXN1-211ENST00000531056 CA3P07451 260 aa21.4■■□□□ 1.02
UBXN1-211ENST00000531056 PPP2R5CQ13362 524 aa21.4■■□□□ 1.02
UBXN1-211ENST00000531056 PPP2R2DQ66LE6 453 aa21.4■■□□□ 1.02
UBXN1-211ENST00000531056 NME8Q8N427 588 aa21.4■■□□□ 1.02
UBXN1-211ENST00000531056 TRPV2Q9Y5S1 764 aa21.4■■□□□ 1.02
UBXN1-211ENST00000531056 KDM3AQ9Y4C1 1321 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms