RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 CEP55Q53EZ4 464 aa18.03■□□□□ 0.48
CHMP4A-204ENST00000530996 FAM160B1Q5W0V3 765 aa18.03■□□□□ 0.48
CHMP4A-204ENST00000530996 TYW1BQ6NUM6 668 aa18.03■□□□□ 0.48
CHMP4A-204ENST00000530996 ZNF713Q8N859 430 aaPredicted RBP18.03■□□□□ 0.48
CHMP4A-204ENST00000530996 PPP2R3CQ969Q6 453 aa18.03■□□□□ 0.48
CHMP4A-204ENST00000530996 ALG13Q9NP73 1137 aaKnown RBP18.03■□□□□ 0.48
CHMP4A-204ENST00000530996 TMEM260Q9NX78 707 aa18.03■□□□□ 0.48
CHMP4A-204ENST00000530996 MRPL42Q9Y6G3 142 aaKnown RBP18.03■□□□□ 0.48
CHMP4A-204ENST00000530996 SMCO2A6NFE2 343 aa18.02■□□□□ 0.48
CHMP4A-204ENST00000530996 STXBP3O00186 592 aa18.02■□□□□ 0.48
CHMP4A-204ENST00000530996 DGKIO75912 1065 aa18.02■□□□□ 0.48
CHMP4A-204ENST00000530996 KRT76Q01546 638 aa18.02■□□□□ 0.48
CHMP4A-204ENST00000530996 HYAL1Q12794 435 aa18.02■□□□□ 0.48
CHMP4A-204ENST00000530996 ITGB3BPQ13352 177 aaPredicted RBP18.02■□□□□ 0.48
CHMP4A-204ENST00000530996 TMEM266Q2M3C6 531 aa18.02■□□□□ 0.48
CHMP4A-204ENST00000530996 RALGAPA2Q2PPJ7 1873 aa18.02■□□□□ 0.48
CHMP4A-204ENST00000530996 CMTR2Q8IYT2 770 aaKnown RBP18.02■□□□□ 0.48
CHMP4A-204ENST00000530996 CLP1Q92989 425 aaKnown RBP18.02■□□□□ 0.48
CHMP4A-204ENST00000530996 AGO4Q9HCK5 861 aaKnown RBP18.02■□□□□ 0.48
CHMP4A-204ENST00000530996 PADI3Q9ULW8 664 aa18.02■□□□□ 0.48
CHMP4A-204ENST00000530996 PCDHA2Q9Y5H9 948 aa18.02■□□□□ 0.48
CHMP4A-204ENST00000530996 V9GY48 417 aaPredicted RBP18.02■□□□□ 0.48
CHMP4A-204ENST00000530996 IGSF9BQ9UPX0 1349 aa18.01■□□□□ 0.47
CHMP4A-204ENST00000530996 NLRC5Q86WI3 1866 aa18.01■□□□□ 0.47
CHMP4A-204ENST00000530996 DCXO43602 365 aa18.01■□□□□ 0.47
CHMP4A-204ENST00000530996 LINC00271P0C7V0 271 aa18.01■□□□□ 0.47
CHMP4A-204ENST00000530996 SREBF1P36956 1147 aa18.01■□□□□ 0.47
CHMP4A-204ENST00000530996 NDUFV1P49821 464 aa18.01■□□□□ 0.47
CHMP4A-204ENST00000530996 ZP2Q05996 745 aa18.01■□□□□ 0.47
CHMP4A-204ENST00000530996 NFX1Q12986 1120 aaKnown RBP18.01■□□□□ 0.47
CHMP4A-204ENST00000530996 SPOUT1Q5T280 376 aaKnown RBP18.01■□□□□ 0.47
CHMP4A-204ENST00000530996 MTHFD1LQ6UB35 978 aa18.01■□□□□ 0.47
CHMP4A-204ENST00000530996 PLPPR4Q7Z2D5 763 aa18.01■□□□□ 0.47
CHMP4A-204ENST00000530996 CKAP2LQ8IYA6 745 aa18.01■□□□□ 0.47
CHMP4A-204ENST00000530996 ZNF689Q96CS4 500 aaPredicted RBP18.01■□□□□ 0.47
CHMP4A-204ENST00000530996 PPP1R16BQ96T49 567 aa18.01■□□□□ 0.47
CHMP4A-204ENST00000530996 PLVAPQ9BX97 442 aa18.01■□□□□ 0.47
CHMP4A-204ENST00000530996 CELF4Q9BZC1 486 aaKnown RBP18.01■□□□□ 0.47
CHMP4A-204ENST00000530996 GLT8D2Q9H1C3 349 aa18.01■□□□□ 0.47
CHMP4A-204ENST00000530996 BARHL2Q9NY43 387 aa18.01■□□□□ 0.47
CHMP4A-204ENST00000530996 PRKAG3Q9UGI9 489 aa18.01■□□□□ 0.47
CHMP4A-204ENST00000530996 BRPF3Q9ULD4 1205 aa18.01■□□□□ 0.47
CHMP4A-204ENST00000530996 SMIM35A0A1B0GVV1 85 aa18■□□□□ 0.47
CHMP4A-204ENST00000530996 DENND3A2RUS2 1198 aa18■□□□□ 0.47
CHMP4A-204ENST00000530996 PRR33A8MZF0 331 aa18■□□□□ 0.47
CHMP4A-204ENST00000530996 GTF2F1P35269 517 aaKnown RBP eCLIP18■□□□□ 0.47
CHMP4A-204ENST00000530996 SLC26A2P50443 739 aa18■□□□□ 0.47
CHMP4A-204ENST00000530996 COL19A1Q14993 1142 aa18■□□□□ 0.47
CHMP4A-204ENST00000530996 BMP2KLQ5H9B9 411 aa18■□□□□ 0.47
CHMP4A-204ENST00000530996 JAKMIP3Q5VZ66 844 aa18■□□□□ 0.47
CHMP4A-204ENST00000530996 PDXDC2PQ6P474 469 aa18■□□□□ 0.47
CHMP4A-204ENST00000530996 DHX32Q7L7V1 743 aaKnown RBP18■□□□□ 0.47
CHMP4A-204ENST00000530996 SKAP1Q86WV1 359 aa18■□□□□ 0.47
CHMP4A-204ENST00000530996 PLA2G4DQ86XP0 818 aa18■□□□□ 0.47
CHMP4A-204ENST00000530996 ADHFE1Q8IWW8 467 aa18■□□□□ 0.47
CHMP4A-204ENST00000530996 POP1Q99575 1024 aaKnown RBP18■□□□□ 0.47
CHMP4A-204ENST00000530996 SQORQ9Y6N5 450 aa18■□□□□ 0.47
CHMP4A-204ENST00000530996 TBX10O75333 385 aa17.99■□□□□ 0.47
CHMP4A-204ENST00000530996 GATMP50440 423 aa17.99■□□□□ 0.47
CHMP4A-204ENST00000530996 METAP2P50579 478 aaKnown RBP eCLIP17.99■□□□□ 0.47
CHMP4A-204ENST00000530996 KRT32Q14532 448 aa17.99■□□□□ 0.47
CHMP4A-204ENST00000530996 MIS18BP1Q6P0N0 1132 aa17.99■□□□□ 0.47
CHMP4A-204ENST00000530996 TRMT1LQ7Z2T5 733 aaKnown RBP17.99■□□□□ 0.47
CHMP4A-204ENST00000530996 TEX2Q8IWB9 1127 aa17.99■□□□□ 0.47
CHMP4A-204ENST00000530996 ZNF302Q9NR11 478 aa17.99■□□□□ 0.47
CHMP4A-204ENST00000530996 PLAGL2Q9UPG8 496 aa17.99■□□□□ 0.47
CHMP4A-204ENST00000530996 LINC01565O15544 149 aa17.98■□□□□ 0.47
CHMP4A-204ENST00000530996 HBP1O60381 514 aa17.98■□□□□ 0.47
CHMP4A-204ENST00000530996 RPS6KA5O75582 802 aa17.98■□□□□ 0.47
CHMP4A-204ENST00000530996 CCNE2O96020 404 aa17.98■□□□□ 0.47
CHMP4A-204ENST00000530996 ITGB1P05556 798 aa17.98■□□□□ 0.47
CHMP4A-204ENST00000530996 KLRC1P26715 233 aa17.98■□□□□ 0.47
CHMP4A-204ENST00000530996 FUT2Q10981 343 aa17.98■□□□□ 0.47
CHMP4A-204ENST00000530996 SMAD4Q13485 552 aaKnown RBP17.98■□□□□ 0.47
CHMP4A-204ENST00000530996 ADCK5Q3MIX3 580 aa17.98■□□□□ 0.47
CHMP4A-204ENST00000530996 CCDC60Q8IWA6 550 aaPredicted RBP17.98■□□□□ 0.47
CHMP4A-204ENST00000530996 NME8Q8N427 588 aa17.98■□□□□ 0.47
CHMP4A-204ENST00000530996 KLHL23Q8NBE8 558 aa17.98■□□□□ 0.47
CHMP4A-204ENST00000530996 ATP8B4Q8TF62 1192 aa17.98■□□□□ 0.47
CHMP4A-204ENST00000530996 P2RX5Q93086 422 aa17.98■□□□□ 0.47
CHMP4A-204ENST00000530996 ZNF577Q9BSK1 485 aa17.98■□□□□ 0.47
CHMP4A-204ENST00000530996 UPF3BQ9BZI7 483 aaKnown RBP17.98■□□□□ 0.47
CHMP4A-204ENST00000530996 CD207Q9UJ71 328 aa17.98■□□□□ 0.47
CHMP4A-204ENST00000530996 ARIH1Q9Y4X5 557 aaPredicted RBP17.98■□□□□ 0.47
CHMP4A-204ENST00000530996 MEIS1O00470 390 aa17.97■□□□□ 0.47
CHMP4A-204ENST00000530996 PPFIA3O75145 1194 aa17.97■□□□□ 0.47
CHMP4A-204ENST00000530996 CDC45O75419 566 aa17.97■□□□□ 0.47
CHMP4A-204ENST00000530996 CDC27P30260 824 aa17.97■□□□□ 0.47
CHMP4A-204ENST00000530996 LTBRP36941 435 aa17.97■□□□□ 0.47
CHMP4A-204ENST00000530996 SARSP49591 514 aaKnown RBP17.97■□□□□ 0.47
CHMP4A-204ENST00000530996 SETQ01105 290 aaPredicted RBP17.97■□□□□ 0.47
CHMP4A-204ENST00000530996 DLX2Q07687 328 aaPredicted RBP17.97■□□□□ 0.47
CHMP4A-204ENST00000530996 ODR4Q5SWX8 454 aa17.97■□□□□ 0.47
CHMP4A-204ENST00000530996 NIPA1Q7RTP0 329 aa17.97■□□□□ 0.47
CHMP4A-204ENST00000530996 RTN4RL1Q86UN2 441 aaPredicted RBP17.97■□□□□ 0.47
CHMP4A-204ENST00000530996 CCDC12Q8WUD4 166 aaPredicted RBP17.97■□□□□ 0.47
CHMP4A-204ENST00000530996 POF1BQ8WVV4 589 aa17.97■□□□□ 0.47
CHMP4A-204ENST00000530996 PCDHB7Q9Y5E2 793 aa17.97■□□□□ 0.47
CHMP4A-204ENST00000530996 KDM3AQ9Y4C1 1321 aa17.97■□□□□ 0.47
CHMP4A-204ENST00000530996 COL1A2P08123 1366 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms