RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 USHBP1Q8N6Y0 703 aa8.84□□□□□ -1
CSDE1-214ENST00000530886 UBLCP1Q8WVY7 318 aaPredicted RBP8.84□□□□□ -1
CSDE1-214ENST00000530886 DYDC1Q8WWB3 177 aa8.84□□□□□ -1
CSDE1-214ENST00000530886 KCNN1Q92952 543 aa8.84□□□□□ -1
CSDE1-214ENST00000530886 ZNF653Q96CK0 615 aa8.84□□□□□ -1
CSDE1-214ENST00000530886 MTMR8Q96EF0 704 aa8.84□□□□□ -1
CSDE1-214ENST00000530886 GBP5Q96PP8 586 aa8.84□□□□□ -1
CSDE1-214ENST00000530886 SLITRK6Q9H5Y7 841 aa8.84□□□□□ -1
CSDE1-214ENST00000530886 TLE6Q9H808 572 aa8.84□□□□□ -1
CSDE1-214ENST00000530886 VPS54Q9P1Q0 977 aa8.84□□□□□ -1
CSDE1-214ENST00000530886 STOML1Q9UBI4 398 aa8.84□□□□□ -1
CSDE1-214ENST00000530886 STK38LQ9Y2H1 464 aa8.84□□□□□ -1
CSDE1-214ENST00000530886 CCDC169A6NNP5 214 aa8.83□□□□□ -1
CSDE1-214ENST00000530886 BIRC5O15392 142 aa8.83□□□□□ -1
CSDE1-214ENST00000530886 ATP9BO43861 1147 aa8.83□□□□□ -1
CSDE1-214ENST00000530886 ASLP04424 464 aa8.83□□□□□ -1
CSDE1-214ENST00000530886 PIM1P11309 404 aaPredicted RBP8.83□□□□□ -1
CSDE1-214ENST00000530886 PMS1P54277 932 aaKnown RBP8.83□□□□□ -1
CSDE1-214ENST00000530886 TMEM62Q0P6H9 643 aa8.83□□□□□ -1
CSDE1-214ENST00000530886 HLTFQ14527 1009 aaKnown RBP eCLIP8.83□□□□□ -1
CSDE1-214ENST00000530886 UCMAQ8WVF2 138 aa8.83□□□□□ -1
CSDE1-214ENST00000530886 EPSTI1Q96J88 318 aa8.83□□□□□ -1
CSDE1-214ENST00000530886 MPHOSPH6Q99547 160 aaKnown RBP8.83□□□□□ -1
CSDE1-214ENST00000530886 EDEM3Q9BZQ6 932 aa8.83□□□□□ -1
CSDE1-214ENST00000530886 BRD8Q9H0E9 1235 aa8.83□□□□□ -1
CSDE1-214ENST00000530886 STMN4Q9H169 189 aaPredicted RBP8.83□□□□□ -1
CSDE1-214ENST00000530886 BARX2Q9UMQ3 279 aaPredicted RBP8.83□□□□□ -1
CSDE1-214ENST00000530886 KIF13AQ9H1H9 1805 aa8.83□□□□□ -1
CSDE1-214ENST00000530886 CEP104O60308 925 aa8.83□□□□□ -1
CSDE1-214ENST00000530886 AFPP02771 609 aaKnown RBP8.83□□□□□ -1
CSDE1-214ENST00000530886 BCRP11274 1271 aa8.83□□□□□ -1
CSDE1-214ENST00000530886 RASA1P20936 1047 aa8.83□□□□□ -1
CSDE1-214ENST00000530886 CBX3Q13185 183 aa8.83□□□□□ -1
CSDE1-214ENST00000530886 CNGA2Q16280 664 aa8.83□□□□□ -1
CSDE1-214ENST00000530886 IL17AQ16552 155 aa8.83□□□□□ -1
CSDE1-214ENST00000530886 KRT26Q7Z3Y9 468 aa8.83□□□□□ -1
CSDE1-214ENST00000530886 DIS3L2Q8IYB7 885 aaKnown RBP8.83□□□□□ -1
CSDE1-214ENST00000530886 MAML3Q96JK9 1138 aa8.83□□□□□ -1
CSDE1-214ENST00000530886 PRMT1Q99873 361 aaKnown RBP8.83□□□□□ -1
CSDE1-214ENST00000530886 EPB41L4BQ9H329 900 aa8.83□□□□□ -1
CSDE1-214ENST00000530886 EPB41L1Q9H4G0 881 aa8.83□□□□□ -1
CSDE1-214ENST00000530886 NMRK1Q9NWW6 199 aa8.83□□□□□ -1
CSDE1-214ENST00000530886 HSFX1Q9UBD0 423 aa8.83□□□□□ -1
CSDE1-214ENST00000530886 PAIP2BQ9ULR5 123 aaKnown RBP8.83□□□□□ -1
CSDE1-214ENST00000530886 THRAP3Q9Y2W1 955 aaKnown RBP8.83□□□□□ -1
CSDE1-214ENST00000530886 PCDH11XQ9BZA7 1347 aa8.83□□□□□ -1
CSDE1-214ENST00000530886 LAMB1P07942 1786 aa8.83□□□□□ -1
CSDE1-214ENST00000530886 SHBGP04278 402 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 IFNAR1P17181 557 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 GM2AP17900 193 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 KCNA3P22001 575 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 USP46P62068 366 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 NAB2Q15742 525 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 UNC13DQ70J99 1090 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 MAEAQ7L5Y9 396 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 ALDH16A1Q8IZ83 802 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 STAG2Q8N3U4 1231 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 FAM13CQ8NE31 585 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 WDR66Q8TBY9 1149 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 SYMPKQ92797 1274 aaKnown RBP8.82□□□□□ -1
CSDE1-214ENST00000530886 TMEM87BQ96K49 555 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 NUDCD1Q96RS6 583 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 UNC45AQ9H3U1 944 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 SH3GLB1Q9Y371 365 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 ATP8B3O60423 1300 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 POTEFA5A3E0 1075 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 STRNO43815 780 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 COBLO75128 1261 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 ZNF189O75820 626 aaPredicted RBP8.82□□□□□ -1
CSDE1-214ENST00000530886 POTEIP0CG38 1075 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 POTEJP0CG39 1038 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 PRCPP42785 496 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 MAGEA1P43355 309 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 CD97P48960 835 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 MUM1Q2TAK8 710 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 MIIPQ5JXC2 388 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 C6orf118Q5T5N4 469 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 GALNT17Q6IS24 598 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 POTEEQ6S8J3 1075 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 LENG1Q96BZ8 264 aaPredicted RBP8.82□□□□□ -1
CSDE1-214ENST00000530886 GRAMD1AQ96CP6 724 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 OLFM3Q96PB7 478 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 SETDB2Q96T68 719 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 CORO1BQ9BR76 489 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 LUC7LQ9NQ29 371 aaKnown RBP8.82□□□□□ -1
CSDE1-214ENST00000530886 TBCCD1Q9NVR7 557 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 WDR46O15213 610 aaKnown RBP8.82□□□□□ -1
CSDE1-214ENST00000530886 GNA14O95837 355 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 FLT3P36888 993 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 SERPINB4P48594 390 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 SSRP1Q08945 709 aaKnown RBP8.82□□□□□ -1
CSDE1-214ENST00000530886 CCDC92Q53HC0 331 aaPredicted RBP8.82□□□□□ -1
CSDE1-214ENST00000530886 MFSD5Q6N075 450 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 CEP128Q6ZU80 1094 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 RALYLQ86SE5 291 aaKnown RBP8.82□□□□□ -1
CSDE1-214ENST00000530886 ZNF554Q86TJ5 538 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 ANKLE1Q8NAG6 615 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 OXER1Q8TDS5 423 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 TUBGCP2Q9BSJ2 902 aa8.82□□□□□ -1
CSDE1-214ENST00000530886 OXCT2Q9BYC2 517 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms