RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 RILPL2Q969X0 211 aa12.3□□□□□ -0.44
TM9SF1-210ENST00000530563 CDCA3Q99618 268 aaPredicted RBP12.3□□□□□ -0.44
TM9SF1-210ENST00000530563 IL25Q9H293 177 aa12.3□□□□□ -0.44
TM9SF1-210ENST00000530563 CNNM2Q9H8M5 875 aa12.3□□□□□ -0.44
TM9SF1-210ENST00000530563 ERAP1Q9NZ08 941 aa12.3□□□□□ -0.44
TM9SF1-210ENST00000530563 HCSTQ9UBK5 93 aa12.3□□□□□ -0.44
TM9SF1-210ENST00000530563 IGSF9BQ9UPX0 1349 aa12.3□□□□□ -0.44
TM9SF1-210ENST00000530563 EPG5Q9HCE0 2579 aa12.29□□□□□ -0.44
TM9SF1-210ENST00000530563 EP300Q09472 2414 aaPredicted RBP12.29□□□□□ -0.44
TM9SF1-210ENST00000530563 MGEA5O60502 916 aa12.29□□□□□ -0.44
TM9SF1-210ENST00000530563 FGF18O76093 207 aa12.29□□□□□ -0.44
TM9SF1-210ENST00000530563 STAG3L1P0CL83 205 aa12.29□□□□□ -0.44
TM9SF1-210ENST00000530563 TMEM62Q0P6H9 643 aa12.29□□□□□ -0.44
TM9SF1-210ENST00000530563 HDAC1Q13547 482 aaPredicted RBP12.29□□□□□ -0.44
TM9SF1-210ENST00000530563 IMMTQ16891 758 aaKnown RBP12.29□□□□□ -0.44
TM9SF1-210ENST00000530563 IER5Q5VY09 327 aa12.29□□□□□ -0.44
TM9SF1-210ENST00000530563 ANKRD54Q6NXT1 300 aa12.29□□□□□ -0.44
TM9SF1-210ENST00000530563 GIMAP8Q8ND71 665 aaPredicted RBP12.29□□□□□ -0.44
TM9SF1-210ENST00000530563 RASGRP4Q8TDF6 673 aa12.29□□□□□ -0.44
TM9SF1-210ENST00000530563 GPRASP2Q96D09 838 aa12.29□□□□□ -0.44
TM9SF1-210ENST00000530563 NEK1Q96PY6 1258 aa12.29□□□□□ -0.44
TM9SF1-210ENST00000530563 FAM49AQ9H0Q0 323 aaPredicted RBP12.29□□□□□ -0.44
TM9SF1-210ENST00000530563 CDH22Q9UJ99 828 aa12.29□□□□□ -0.44
TM9SF1-210ENST00000530563 TRPC6Q9Y210 931 aa12.29□□□□□ -0.44
TM9SF1-210ENST00000530563 PCDHA2Q9Y5H9 948 aa12.29□□□□□ -0.44
TM9SF1-210ENST00000530563 KDM3AQ9Y4C1 1321 aa12.29□□□□□ -0.44
TM9SF1-210ENST00000530563 RRN3P2A6NIE6 340 aa12.28□□□□□ -0.44
TM9SF1-210ENST00000530563 BRD1O95696 1058 aa12.28□□□□□ -0.44
TM9SF1-210ENST00000530563 SARSP49591 514 aaKnown RBP12.28□□□□□ -0.44
TM9SF1-210ENST00000530563 IGBP1P78318 339 aa12.28□□□□□ -0.44
TM9SF1-210ENST00000530563 FAM102BQ5T8I3 360 aa12.28□□□□□ -0.44
TM9SF1-210ENST00000530563 KREMEN2Q8NCW0 462 aa12.28□□□□□ -0.44
TM9SF1-210ENST00000530563 MICAL1Q8TDZ2 1067 aa12.28□□□□□ -0.44
TM9SF1-210ENST00000530563 TRAPPC12Q8WVT3 735 aa12.28□□□□□ -0.44
TM9SF1-210ENST00000530563 CELF4Q9BZC1 486 aaKnown RBP12.28□□□□□ -0.44
TM9SF1-210ENST00000530563 OSBPL3Q9H4L5 887 aa12.28□□□□□ -0.44
TM9SF1-210ENST00000530563 SMARCAD1Q9H4L7 1026 aa12.28□□□□□ -0.44
TM9SF1-210ENST00000530563 CWH43Q9H720 699 aa12.28□□□□□ -0.44
TM9SF1-210ENST00000530563 CDHR5Q9HBB8 845 aa12.28□□□□□ -0.44
TM9SF1-210ENST00000530563 TRPV2Q9Y5S1 764 aa12.28□□□□□ -0.44
TM9SF1-210ENST00000530563 UBIAD1Q9Y5Z9 338 aa12.28□□□□□ -0.44
TM9SF1-210ENST00000530563 NCOR2Q9Y618 2525 aa12.28□□□□□ -0.44
TM9SF1-210ENST00000530563 HIDE1A8MVS5 230 aa12.27□□□□□ -0.45
TM9SF1-210ENST00000530563 RPLP2P05387 115 aaKnown RBP12.27□□□□□ -0.45
TM9SF1-210ENST00000530563 ARP10275 920 aa12.27□□□□□ -0.45
TM9SF1-210ENST00000530563 FAM189BP81408 668 aa12.27□□□□□ -0.45
TM9SF1-210ENST00000530563 APOBRQ0VD83 1088 aa12.27□□□□□ -0.45
TM9SF1-210ENST00000530563 PAK2Q13177 524 aa12.27□□□□□ -0.45
TM9SF1-210ENST00000530563 TMEM266Q2M3C6 531 aa12.27□□□□□ -0.45
TM9SF1-210ENST00000530563 PDE12Q6L8Q7 609 aaKnown RBP12.27□□□□□ -0.45
TM9SF1-210ENST00000530563 NLRX1Q86UT6 975 aa12.27□□□□□ -0.45
TM9SF1-210ENST00000530563 PLEKHM2Q8IWE5 1019 aa12.27□□□□□ -0.45
TM9SF1-210ENST00000530563 COLGALT1Q8NBJ5 622 aa12.27□□□□□ -0.45
TM9SF1-210ENST00000530563 GLG1Q92896 1179 aa12.27□□□□□ -0.45
TM9SF1-210ENST00000530563 APOL5Q9BWW9 433 aa12.27□□□□□ -0.45
TM9SF1-210ENST00000530563 LNPKQ9C0E8 428 aa12.27□□□□□ -0.45
TM9SF1-210ENST00000530563 SMOC2Q9H3U7 446 aa12.27□□□□□ -0.45
TM9SF1-210ENST00000530563 ERVK-5Q9HDB9 667 aa12.27□□□□□ -0.45
TM9SF1-210ENST00000530563 TYW1Q9NV66 732 aaKnown RBP12.27□□□□□ -0.45
TM9SF1-210ENST00000530563 PCDHB12Q9Y5F1 795 aa12.27□□□□□ -0.45
TM9SF1-210ENST00000530563 TAF6LQ9Y6J9 622 aa12.27□□□□□ -0.45
TM9SF1-210ENST00000530563 FNDC1Q4ZHG4 1894 aaPredicted RBP12.27□□□□□ -0.45
TM9SF1-210ENST00000530563 MYO10Q9HD67 2058 aa12.26□□□□□ -0.45
TM9SF1-210ENST00000530563 ZFHX4Q86UP3 3567 aa12.26□□□□□ -0.45
TM9SF1-210ENST00000530563 FSD2A1L4K1 749 aa12.26□□□□□ -0.45
TM9SF1-210ENST00000530563 C9IYK1 514 aa12.26□□□□□ -0.45
TM9SF1-210ENST00000530563 TECP42680 631 aa12.26□□□□□ -0.45
TM9SF1-210ENST00000530563 PLCB3Q01970 1234 aa12.26□□□□□ -0.45
TM9SF1-210ENST00000530563 PLCB4Q15147 1175 aa12.26□□□□□ -0.45
TM9SF1-210ENST00000530563 ERMP1Q7Z2K6 904 aa12.26□□□□□ -0.45
TM9SF1-210ENST00000530563 FRMD5Q7Z6J6 570 aa12.26□□□□□ -0.45
TM9SF1-210ENST00000530563 UBALD2Q8IYN6 164 aa12.26□□□□□ -0.45
TM9SF1-210ENST00000530563 TMEM40Q8WWA1 233 aa12.26□□□□□ -0.45
TM9SF1-210ENST00000530563 PIBF1Q8WXW3 757 aa12.26□□□□□ -0.45
TM9SF1-210ENST00000530563 RGS18Q9NS28 235 aa12.26□□□□□ -0.45
TM9SF1-210ENST00000530563 TMEM260Q9NX78 707 aa12.26□□□□□ -0.45
TM9SF1-210ENST00000530563 ZBTB47Q9UFB7 747 aaPredicted RBP12.26□□□□□ -0.45
TM9SF1-210ENST00000530563 LZTS1Q9Y250 596 aa12.26□□□□□ -0.45
TM9SF1-210ENST00000530563 NOC2LQ9Y3T9 749 aaKnown RBP12.26□□□□□ -0.45
TM9SF1-210ENST00000530563 LOXHD1Q8IVV2 1947 aa12.26□□□□□ -0.45
TM9SF1-210ENST00000530563 KMT2BQ9UMN6 2715 aaPredicted RBP12.26□□□□□ -0.45
TM9SF1-210ENST00000530563 SMIM35A0A1B0GVV1 85 aa12.25□□□□□ -0.45
TM9SF1-210ENST00000530563 TBKBP1A7MCY6 615 aa12.25□□□□□ -0.45
TM9SF1-210ENST00000530563 C2CD4DB7Z1M9 353 aa12.25□□□□□ -0.45
TM9SF1-210ENST00000530563 HOXB8P17481 243 aaPredicted RBP12.25□□□□□ -0.45
TM9SF1-210ENST00000530563 SP100P23497 879 aaPredicted RBP12.25□□□□□ -0.45
TM9SF1-210ENST00000530563 KRT76Q01546 638 aa12.25□□□□□ -0.45
TM9SF1-210ENST00000530563 LRRC55Q6ZSA7 311 aa12.25□□□□□ -0.45
TM9SF1-210ENST00000530563 FAM43BQ6ZT52 329 aaPredicted RBP12.25□□□□□ -0.45
TM9SF1-210ENST00000530563 NME8Q8N427 588 aa12.25□□□□□ -0.45
TM9SF1-210ENST00000530563 SMARCC2Q8TAQ2 1214 aa12.25□□□□□ -0.45
TM9SF1-210ENST00000530563 MRPS27Q92552 414 aaKnown RBP12.25□□□□□ -0.45
TM9SF1-210ENST00000530563 CDHR1Q96JP9 859 aa12.25□□□□□ -0.45
TM9SF1-210ENST00000530563 ADAM2Q99965 735 aa12.25□□□□□ -0.45
TM9SF1-210ENST00000530563 POMKQ9H5K3 350 aa12.25□□□□□ -0.45
TM9SF1-210ENST00000530563 JADE2Q9NQC1 790 aa12.25□□□□□ -0.45
TM9SF1-210ENST00000530563 AAASQ9NRG9 546 aa12.25□□□□□ -0.45
TM9SF1-210ENST00000530563 DIAPH3Q9NSV4 1193 aa12.25□□□□□ -0.45
TM9SF1-210ENST00000530563 RNF19AQ9NV58 838 aa12.25□□□□□ -0.45
TM9SF1-210ENST00000530563 LRFN2Q9ULH4 789 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms