RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 SPPL3Q8TCT6 385 aa17.07■□□□□ 0.32
CAPN1-219ENST00000530495 POP1Q99575 1024 aaKnown RBP17.07■□□□□ 0.32
CAPN1-219ENST00000530495 IGFLR1Q9H665 355 aa17.07■□□□□ 0.32
CAPN1-219ENST00000530495 KDM3AQ9Y4C1 1321 aa17.06■□□□□ 0.32
CAPN1-219ENST00000530495 LINC01565O15544 149 aa17.06■□□□□ 0.32
CAPN1-219ENST00000530495 TBX10O75333 385 aa17.06■□□□□ 0.32
CAPN1-219ENST00000530495 ATG7O95352 703 aa17.06■□□□□ 0.32
CAPN1-219ENST00000530495 ITGB1P05556 798 aa17.06■□□□□ 0.32
CAPN1-219ENST00000530495 STAG3L1P0CL83 205 aa17.06■□□□□ 0.32
CAPN1-219ENST00000530495 DNAJB1P25685 340 aa17.06■□□□□ 0.32
CAPN1-219ENST00000530495 TMEM62Q0P6H9 643 aa17.06■□□□□ 0.32
CAPN1-219ENST00000530495 SMAD4Q13485 552 aaKnown RBP17.06■□□□□ 0.32
CAPN1-219ENST00000530495 CLUL1Q15846 466 aa17.06■□□□□ 0.32
CAPN1-219ENST00000530495 RAB11FIP4Q86YS3 637 aa17.06■□□□□ 0.32
CAPN1-219ENST00000530495 TRAPPC12Q8WVT3 735 aa17.06■□□□□ 0.32
CAPN1-219ENST00000530495 SDF4Q9BRK5 362 aa17.06■□□□□ 0.32
CAPN1-219ENST00000530495 KCNH6Q9H252 994 aa17.06■□□□□ 0.32
CAPN1-219ENST00000530495 CD207Q9UJ71 328 aa17.06■□□□□ 0.32
CAPN1-219ENST00000530495 TRPC6Q9Y210 931 aa17.06■□□□□ 0.32
CAPN1-219ENST00000530495 MUC6Q6W4X9 2439 aa17.05■□□□□ 0.32
CAPN1-219ENST00000530495 SMIM35A0A1B0GVV1 85 aa17.05■□□□□ 0.32
CAPN1-219ENST00000530495 FOSP01100 380 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-219ENST00000530495 ARP10275 920 aa17.05■□□□□ 0.32
CAPN1-219ENST00000530495 SCG2P13521 617 aa17.05■□□□□ 0.32
CAPN1-219ENST00000530495 SLC26A2P50443 739 aa17.05■□□□□ 0.32
CAPN1-219ENST00000530495 PAK2Q13177 524 aa17.05■□□□□ 0.32
CAPN1-219ENST00000530495 HERC4Q5GLZ8 1057 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-219ENST00000530495 CREB3L3Q68CJ9 461 aa17.05■□□□□ 0.32
CAPN1-219ENST00000530495 MTHFD1LQ6UB35 978 aa17.05■□□□□ 0.32
CAPN1-219ENST00000530495 KLHL23Q8NBE8 558 aa17.05■□□□□ 0.32
CAPN1-219ENST00000530495 PPP2R3CQ969Q6 453 aa17.05■□□□□ 0.32
CAPN1-219ENST00000530495 MSLNLQ96KJ4 702 aa17.05■□□□□ 0.32
CAPN1-219ENST00000530495 LRRC2Q9BYS8 371 aa17.05■□□□□ 0.32
CAPN1-219ENST00000530495 TMX1Q9H3N1 280 aa17.05■□□□□ 0.32
CAPN1-219ENST00000530495 AGO4Q9HCK5 861 aaKnown RBP17.05■□□□□ 0.32
CAPN1-219ENST00000530495 RIC8AQ9NPQ8 531 aa17.05■□□□□ 0.32
CAPN1-219ENST00000530495 C5orf42Q9H799 3197 aa17.05■□□□□ 0.32
CAPN1-219ENST00000530495 IGKV6D-21A0A0A0MT36 114 aa17.04■□□□□ 0.32
CAPN1-219ENST00000530495 MEIS1O00470 390 aa17.04■□□□□ 0.32
CAPN1-219ENST00000530495 EYA4O95677 639 aa17.04■□□□□ 0.32
CAPN1-219ENST00000530495 KRT76Q01546 638 aa17.04■□□□□ 0.32
CAPN1-219ENST00000530495 ITGB3BPQ13352 177 aaPredicted RBP17.04■□□□□ 0.32
CAPN1-219ENST00000530495 CEP55Q53EZ4 464 aa17.04■□□□□ 0.32
CAPN1-219ENST00000530495 WWC2Q6AWC2 1192 aa17.04■□□□□ 0.32
CAPN1-219ENST00000530495 SYNE3Q6ZMZ3 975 aa17.04■□□□□ 0.32
CAPN1-219ENST00000530495 ALYREFQ86V81 257 aaKnown RBP17.04■□□□□ 0.32
CAPN1-219ENST00000530495 RNF135Q8IUD6 432 aa17.04■□□□□ 0.32
CAPN1-219ENST00000530495 EFHBQ8N7U6 833 aa17.04■□□□□ 0.32
CAPN1-219ENST00000530495 ESYT1Q9BSJ8 1104 aa17.04■□□□□ 0.32
CAPN1-219ENST00000530495 STXBP3O00186 592 aa17.03■□□□□ 0.32
CAPN1-219ENST00000530495 KLRC1P26715 233 aa17.03■□□□□ 0.32
CAPN1-219ENST00000530495 PAN2Q504Q3 1202 aaKnown RBP17.03■□□□□ 0.32
CAPN1-219ENST00000530495 TYW1BQ6NUM6 668 aa17.03■□□□□ 0.32
CAPN1-219ENST00000530495 ADGRD2Q7Z7M1 963 aa17.03■□□□□ 0.32
CAPN1-219ENST00000530495 MICU3Q86XE3 530 aa17.03■□□□□ 0.32
CAPN1-219ENST00000530495 POF1BQ8WVV4 589 aa17.03■□□□□ 0.32
CAPN1-219ENST00000530495 RBM28Q9NW13 759 aaKnown RBP17.03■□□□□ 0.32
CAPN1-219ENST00000530495 CLEC1BQ9P126 229 aa17.03■□□□□ 0.32
CAPN1-219ENST00000530495 LRFN2Q9ULH4 789 aa17.03■□□□□ 0.32
CAPN1-219ENST00000530495 PLXNA4Q9HCM2 1894 aa17.03■□□□□ 0.32
CAPN1-219ENST00000530495 HBP1O60381 514 aa17.02■□□□□ 0.32
CAPN1-219ENST00000530495 CSPG5O95196 566 aa17.02■□□□□ 0.32
CAPN1-219ENST00000530495 SARSP49591 514 aaKnown RBP17.02■□□□□ 0.32
CAPN1-219ENST00000530495 NDUFV1P49821 464 aa17.02■□□□□ 0.32
CAPN1-219ENST00000530495 ADCY7P51828 1080 aa17.02■□□□□ 0.32
CAPN1-219ENST00000530495 NAPAP54920 295 aa17.02■□□□□ 0.32
CAPN1-219ENST00000530495 FUT2Q10981 343 aa17.02■□□□□ 0.32
CAPN1-219ENST00000530495 COASYQ13057 564 aa17.02■□□□□ 0.32
CAPN1-219ENST00000530495 PPP1R18Q6NYC8 613 aa17.02■□□□□ 0.32
CAPN1-219ENST00000530495 APOA5Q6Q788 366 aa17.02■□□□□ 0.32
CAPN1-219ENST00000530495 ABHD15Q6UXT9 468 aa17.02■□□□□ 0.32
CAPN1-219ENST00000530495 HFE2Q6ZVN8 426 aa17.02■□□□□ 0.32
CAPN1-219ENST00000530495 NIPA1Q7RTP0 329 aa17.02■□□□□ 0.32
CAPN1-219ENST00000530495 PGBD1Q96JS3 809 aa17.02■□□□□ 0.32
CAPN1-219ENST00000530495 FBXL18Q96ME1 805 aa17.02■□□□□ 0.32
CAPN1-219ENST00000530495 ANO3Q9BYT9 981 aa17.02■□□□□ 0.32
CAPN1-219ENST00000530495 ERVK-5Q9HDB9 667 aa17.02■□□□□ 0.32
CAPN1-219ENST00000530495 RNF216Q9NWF9 866 aaPredicted RBP17.02■□□□□ 0.32
CAPN1-219ENST00000530495 MUTYHQ9UIF7 546 aa17.02■□□□□ 0.32
CAPN1-219ENST00000530495 PCDHB7Q9Y5E2 793 aa17.02■□□□□ 0.32
CAPN1-219ENST00000530495 V9GY48 417 aaPredicted RBP17.02■□□□□ 0.32
CAPN1-219ENST00000530495 FNDC1Q4ZHG4 1894 aaPredicted RBP17.01■□□□□ 0.31
CAPN1-219ENST00000530495 CNTNAP5Q8WYK1 1306 aa17.01■□□□□ 0.31
CAPN1-219ENST00000530495 SMCO2A6NFE2 343 aa17.01■□□□□ 0.31
CAPN1-219ENST00000530495 hCG_1984214I3L0E3 225 aa17.01■□□□□ 0.31
CAPN1-219ENST00000530495 CCNE2O96020 404 aa17.01■□□□□ 0.31
CAPN1-219ENST00000530495 SREBF1P36956 1147 aa17.01■□□□□ 0.31
CAPN1-219ENST00000530495 CLK2P49760 499 aaKnown RBP17.01■□□□□ 0.31
CAPN1-219ENST00000530495 GATMP50440 423 aa17.01■□□□□ 0.31
CAPN1-219ENST00000530495 EXOSC10Q01780 885 aaKnown RBP17.01■□□□□ 0.31
CAPN1-219ENST00000530495 NFX1Q12986 1120 aaKnown RBP17.01■□□□□ 0.31
CAPN1-219ENST00000530495 TMEM266Q2M3C6 531 aa17.01■□□□□ 0.31
CAPN1-219ENST00000530495 KIAA0319LQ8IZA0 1049 aa17.01■□□□□ 0.31
CAPN1-219ENST00000530495 ZNF713Q8N859 430 aaPredicted RBP17.01■□□□□ 0.31
CAPN1-219ENST00000530495 SMRP1Q8NCR6 262 aa17.01■□□□□ 0.31
CAPN1-219ENST00000530495 ATP8B4Q8TF62 1192 aa17.01■□□□□ 0.31
CAPN1-219ENST00000530495 EDAQ92838 391 aa17.01■□□□□ 0.31
CAPN1-219ENST00000530495 MFSD14AQ96MC6 490 aa17.01■□□□□ 0.31
CAPN1-219ENST00000530495 GLT8D2Q9H1C3 349 aa17.01■□□□□ 0.31
CAPN1-219ENST00000530495 CDHR5Q9HBB8 845 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms