RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 BARHL2Q9NY43 387 aa23.66■■□□□ 1.38
TSPAN4-219ENST00000530404 PCDHA2Q9Y5H9 948 aa23.66■■□□□ 1.38
TSPAN4-219ENST00000530404 POTEB3A0JP26 581 aa23.65■■□□□ 1.38
TSPAN4-219ENST00000530404 PI4K2BG5E9Z4 385 aa23.65■■□□□ 1.38
TSPAN4-219ENST00000530404 M0QZ92 97 aa23.65■■□□□ 1.38
TSPAN4-219ENST00000530404 ADAMTS3O15072 1205 aa23.65■■□□□ 1.38
TSPAN4-219ENST00000530404 DGKIO75912 1065 aa23.65■■□□□ 1.38
TSPAN4-219ENST00000530404 FOSP01100 380 aaPredicted RBP23.65■■□□□ 1.38
TSPAN4-219ENST00000530404 RB1P06400 928 aa23.65■■□□□ 1.38
TSPAN4-219ENST00000530404 ZNF76P36508 570 aa23.65■■□□□ 1.38
TSPAN4-219ENST00000530404 PLA2G5P39877 138 aa23.65■■□□□ 1.38
TSPAN4-219ENST00000530404 CLK2P49760 499 aaKnown RBP23.65■■□□□ 1.38
TSPAN4-219ENST00000530404 TMEM266Q2M3C6 531 aa23.65■■□□□ 1.38
TSPAN4-219ENST00000530404 PAN2Q504Q3 1202 aaKnown RBP23.65■■□□□ 1.38
TSPAN4-219ENST00000530404 JAKMIP3Q5VZ66 844 aa23.65■■□□□ 1.38
TSPAN4-219ENST00000530404 POTEBQ6S5H4 581 aa23.65■■□□□ 1.38
TSPAN4-219ENST00000530404 PLPPR4Q7Z2D5 763 aa23.65■■□□□ 1.38
TSPAN4-219ENST00000530404 CLP1Q92989 425 aaKnown RBP23.65■■□□□ 1.38
TSPAN4-219ENST00000530404 C11orf84Q9BUA3 381 aaPredicted RBP23.65■■□□□ 1.38
TSPAN4-219ENST00000530404 ALG13Q9NP73 1137 aaKnown RBP23.65■■□□□ 1.38
TSPAN4-219ENST00000530404 PADI3Q9ULW8 664 aa23.65■■□□□ 1.38
TSPAN4-219ENST00000530404 MRPL42Q9Y6G3 142 aaKnown RBP23.65■■□□□ 1.38
TSPAN4-219ENST00000530404 MEIS1O00470 390 aa23.64■■□□□ 1.37
TSPAN4-219ENST00000530404 CCNE2O96020 404 aa23.64■■□□□ 1.37
TSPAN4-219ENST00000530404 GTF2F1P35269 517 aaKnown RBP eCLIP23.64■■□□□ 1.375e-7■■■■■ 34.9
TSPAN4-219ENST00000530404 SREBF1P36956 1147 aa23.64■■□□□ 1.37
TSPAN4-219ENST00000530404 GATMP50440 423 aa23.64■■□□□ 1.37
TSPAN4-219ENST00000530404 CLUL1Q15846 466 aa23.64■■□□□ 1.37
TSPAN4-219ENST00000530404 MTHFD1LQ6UB35 978 aa23.64■■□□□ 1.37
TSPAN4-219ENST00000530404 FAM122AQ96E09 287 aa23.64■■□□□ 1.37
TSPAN4-219ENST00000530404 CELF4Q9BZC1 486 aaKnown RBP23.64■■□□□ 1.37
TSPAN4-219ENST00000530404 RWDD3Q9Y3V2 267 aa23.64■■□□□ 1.37
TSPAN4-219ENST00000530404 IGSF9BQ9UPX0 1349 aa23.63■■□□□ 1.37
TSPAN4-219ENST00000530404 ATG7O95352 703 aa23.63■■□□□ 1.37
TSPAN4-219ENST00000530404 ADD1P35611 737 aaKnown RBP23.63■■□□□ 1.37
TSPAN4-219ENST00000530404 LTBRP36941 435 aa23.63■■□□□ 1.37
TSPAN4-219ENST00000530404 DLX2Q07687 328 aaPredicted RBP23.63■■□□□ 1.37
TSPAN4-219ENST00000530404 HYAL1Q12794 435 aa23.63■■□□□ 1.37
TSPAN4-219ENST00000530404 PAK2Q13177 524 aa23.63■■□□□ 1.37
TSPAN4-219ENST00000530404 AP3B2Q13367 1082 aa23.63■■□□□ 1.37
TSPAN4-219ENST00000530404 COL19A1Q14993 1142 aa23.63■■□□□ 1.37
TSPAN4-219ENST00000530404 IGFLR1Q9H665 355 aa23.63■■□□□ 1.37
TSPAN4-219ENST00000530404 GINS2Q9Y248 185 aa23.63■■□□□ 1.37
TSPAN4-219ENST00000530404 WDFY4Q6ZS81 3184 aa23.62■■□□□ 1.37
TSPAN4-219ENST00000530404 FAM86B1E9PN63 330 aa23.62■■□□□ 1.37
TSPAN4-219ENST00000530404 hCG_1984214I3L0E3 225 aa23.62■■□□□ 1.37
TSPAN4-219ENST00000530404 BACH1O14867 736 aa23.62■■□□□ 1.37
TSPAN4-219ENST00000530404 GPR37L1O60883 481 aa23.62■■□□□ 1.37
TSPAN4-219ENST00000530404 FAM86B2P0C5J1 330 aa23.62■■□□□ 1.37
TSPAN4-219ENST00000530404 KLRC1P26715 233 aa23.62■■□□□ 1.37
TSPAN4-219ENST00000530404 APOBRQ0VD83 1088 aa23.62■■□□□ 1.37
TSPAN4-219ENST00000530404 PUS10Q3MIT2 529 aaKnown RBP23.62■■□□□ 1.37
TSPAN4-219ENST00000530404 PLA2G4DQ86XP0 818 aa23.62■■□□□ 1.37
TSPAN4-219ENST00000530404 CCDC60Q8IWA6 550 aaPredicted RBP23.62■■□□□ 1.37
TSPAN4-219ENST00000530404 ZNF713Q8N859 430 aaPredicted RBP23.62■■□□□ 1.37
TSPAN4-219ENST00000530404 TNPO1Q92973 898 aaKnown RBP23.62■■□□□ 1.37
TSPAN4-219ENST00000530404 PPP1R16BQ96T49 567 aa23.62■■□□□ 1.37
TSPAN4-219ENST00000530404 LMAN2LQ9H0V9 348 aa23.62■■□□□ 1.37
TSPAN4-219ENST00000530404 TMX1Q9H3N1 280 aa23.62■■□□□ 1.37
TSPAN4-219ENST00000530404 IGKV6D-21A0A0A0MT36 114 aa23.61■■□□□ 1.37
TSPAN4-219ENST00000530404 SMIM35A0A1B0GVV1 85 aa23.61■■□□□ 1.37
TSPAN4-219ENST00000530404 RPLP2P05387 115 aaKnown RBP23.61■■□□□ 1.37
TSPAN4-219ENST00000530404 KRT76Q01546 638 aa23.61■■□□□ 1.37
TSPAN4-219ENST00000530404 TSGA10IPQ3SY00 556 aa23.61■■□□□ 1.37
TSPAN4-219ENST00000530404 ABHD15Q6UXT9 468 aa23.61■■□□□ 1.37
TSPAN4-219ENST00000530404 NPAS4Q8IUM7 802 aa23.61■■□□□ 1.37
TSPAN4-219ENST00000530404 CRIPAKQ8N1N5 446 aa23.61■■□□□ 1.37
TSPAN4-219ENST00000530404 FTHL17Q9BXU8 183 aa23.61■■□□□ 1.37
TSPAN4-219ENST00000530404 CDHR5Q9HBB8 845 aa23.61■■□□□ 1.37
TSPAN4-219ENST00000530404 HCN4Q9Y3Q4 1203 aa23.61■■□□□ 1.37
TSPAN4-219ENST00000530404 SQORQ9Y6N5 450 aa23.61■■□□□ 1.37
TSPAN4-219ENST00000530404 LINC01565O15544 149 aa23.6■■□□□ 1.37
TSPAN4-219ENST00000530404 CDC45O75419 566 aa23.6■■□□□ 1.37
TSPAN4-219ENST00000530404 MMP1P03956 469 aa23.6■■□□□ 1.37
TSPAN4-219ENST00000530404 SCG2P13521 617 aa23.6■■□□□ 1.37
TSPAN4-219ENST00000530404 DNAJB1P25685 340 aa23.6■■□□□ 1.37
TSPAN4-219ENST00000530404 METAP2P50579 478 aaKnown RBP eCLIP23.6■■□□□ 1.37
TSPAN4-219ENST00000530404 FGD1P98174 961 aa23.6■■□□□ 1.37
TSPAN4-219ENST00000530404 NFX1Q12986 1120 aaKnown RBP23.6■■□□□ 1.37
TSPAN4-219ENST00000530404 CAMK1Q14012 370 aa23.6■■□□□ 1.37
TSPAN4-219ENST00000530404 PFKFB3Q16875 520 aaPredicted RBP23.6■■□□□ 1.37
TSPAN4-219ENST00000530404 Q6ZUG5 572 aa23.6■■□□□ 1.37
TSPAN4-219ENST00000530404 TRMT1LQ7Z2T5 733 aaKnown RBP23.6■■□□□ 1.37
TSPAN4-219ENST00000530404 CMTR2Q8IYT2 770 aaKnown RBP23.6■■□□□ 1.37
TSPAN4-219ENST00000530404 ZNF302Q9NR11 478 aa23.6■■□□□ 1.37
TSPAN4-219ENST00000530404 PLAGL2Q9UPG8 496 aa23.6■■□□□ 1.37
TSPAN4-219ENST00000530404 IGLV3-22A0A075B6J6 115 aa23.59■■□□□ 1.37
TSPAN4-219ENST00000530404 DHX15O43143 795 aaKnown RBP23.59■■□□□ 1.37
TSPAN4-219ENST00000530404 HBP1O60381 514 aa23.59■■□□□ 1.37
TSPAN4-219ENST00000530404 MGEA5O60502 916 aa23.59■■□□□ 1.37
TSPAN4-219ENST00000530404 PPFIA3O75145 1194 aa23.59■■□□□ 1.37
TSPAN4-219ENST00000530404 KRT32Q14532 448 aa23.59■■□□□ 1.37
TSPAN4-219ENST00000530404 CTC1Q2NKJ3 1217 aa23.59■■□□□ 1.37
TSPAN4-219ENST00000530404 FAM160B1Q5W0V3 765 aa23.59■■□□□ 1.37
TSPAN4-219ENST00000530404 SWSAP1Q6NVH7 229 aa23.59■■□□□ 1.37
TSPAN4-219ENST00000530404 PDXDC2PQ6P474 469 aa23.59■■□□□ 1.37
TSPAN4-219ENST00000530404 CENPQQ7L2Z9 268 aaPredicted RBP23.59■■□□□ 1.37
TSPAN4-219ENST00000530404 NIPA1Q7RTP0 329 aa23.59■■□□□ 1.37
TSPAN4-219ENST00000530404 NOC2LQ9Y3T9 749 aaKnown RBP23.59■■□□□ 1.37
TSPAN4-219ENST00000530404 KDM3AQ9Y4C1 1321 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms